RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 LOC107984640A0A0U1RRK4 108 aa12.44□□□□□ -0.42
SNX17-202ENST00000427123 M0R2N4 97 aa12.44□□□□□ -0.42
SNX17-202ENST00000427123 A0A087WVE0 104 aa12.44□□□□□ -0.42
SNX17-202ENST00000427123 FAM168BA1KXE4 195 aa12.44□□□□□ -0.42
SNX17-202ENST00000427123 IGLV1-50A0A075B6I6 118 aa12.42□□□□□ -0.42
SNX17-202ENST00000427123 UQCRQO14949 82 aa12.41□□□□□ -0.42
SNX17-202ENST00000427123 C3orf22Q8N5N4 141 aa12.41□□□□□ -0.42
SNX17-202ENST00000427123 RPL37AP8A6NKH3 93 aa12.4□□□□□ -0.42
SNX17-202ENST00000427123 SPRR1AP35321 89 aa12.4□□□□□ -0.42
SNX17-202ENST00000427123 Q6ZRX8 168 aa12.4□□□□□ -0.42
SNX17-202ENST00000427123 KRTAP7-1Q8IUC3 87 aa12.4□□□□□ -0.42
SNX17-202ENST00000427123 KRTAP1-5Q9BYS1 174 aa12.4□□□□□ -0.42
SNX17-202ENST00000427123 DHRS4-AS1Q9P1J3 65 aa12.4□□□□□ -0.42
SNX17-202ENST00000427123 KRTAP4-16G5E9R7 235 aaPredicted RBP12.39□□□□□ -0.43
SNX17-202ENST00000427123 Q6ZVQ6 151 aa12.39□□□□□ -0.43
SNX17-202ENST00000427123 UBE2DNLQ8IWF7 75 aa12.38□□□□□ -0.43
SNX17-202ENST00000427123 APLNQ9ULZ1 77 aa12.38□□□□□ -0.43
SNX17-202ENST00000427123 COX7CP15954 63 aa12.38□□□□□ -0.43
SNX17-202ENST00000427123 MRPL55Q7Z7F7 128 aaKnown RBP12.38□□□□□ -0.43
SNX17-202ENST00000427123 B9D2Q9BPU9 175 aa12.38□□□□□ -0.43
SNX17-202ENST00000427123 FAM19A5Q7Z5A7 132 aaPredicted RBP12.37□□□□□ -0.43
SNX17-202ENST00000427123 SS18L2Q9UHA2 77 aa12.37□□□□□ -0.43
SNX17-202ENST00000427123 ETDCA0A1B0GVM5 59 aa12.37□□□□□ -0.43
SNX17-202ENST00000427123 LINC01547P58512 204 aaPredicted RBP12.35□□□□□ -0.43
SNX17-202ENST00000427123 C9orf153Q5TBE3 101 aa12.35□□□□□ -0.43
SNX17-202ENST00000427123 MDFIQ99750 246 aa12.35□□□□□ -0.43
SNX17-202ENST00000427123 FAM19A1Q7Z5A9 133 aa12.35□□□□□ -0.43
SNX17-202ENST00000427123 MGAM2Q2M2H8 2515 aa12.34□□□□□ -0.43
SNX17-202ENST00000427123 CNBPP62633 177 aaKnown RBP12.34□□□□□ -0.43
SNX17-202ENST00000427123 PSCAO43653 123 aa12.33□□□□□ -0.43
SNX17-202ENST00000427123 Q8N377 158 aa12.33□□□□□ -0.43
SNX17-202ENST00000427123 Q9BRP9 147 aa12.33□□□□□ -0.43
SNX17-202ENST00000427123 DNAH9Q9NYC9 4486 aa12.32□□□□□ -0.44
SNX17-202ENST00000427123 CXCL6P80162 114 aa12.32□□□□□ -0.44
SNX17-202ENST00000427123 HAMPP81172 84 aa12.32□□□□□ -0.44
SNX17-202ENST00000427123 DEFB105AQ8NG35 78 aa12.32□□□□□ -0.44
SNX17-202ENST00000427123 SERP2Q8N6R1 65 aa12.31□□□□□ -0.44
SNX17-202ENST00000427123 C16orf90A8MZG2 172 aa12.29□□□□□ -0.44
SNX17-202ENST00000427123 C14orf177Q52M58 125 aa12.29□□□□□ -0.44
SNX17-202ENST00000427123 IGLV5-48A0A075B6I7 105 aa12.28□□□□□ -0.44
SNX17-202ENST00000427123 A0A096LNI7 61 aa12.28□□□□□ -0.44
SNX17-202ENST00000427123 REG3GQ6UW15 175 aa12.28□□□□□ -0.44
SNX17-202ENST00000427123 CRYGAP11844 174 aa12.27□□□□□ -0.44
SNX17-202ENST00000427123 DYNC2H1Q8NCM8 4307 aaKnown RBP12.27□□□□□ -0.45
SNX17-202ENST00000427123 STAB2Q8WWQ8 2551 aa12.25□□□□□ -0.45
SNX17-202ENST00000427123 COL7A1Q02388 2944 aa12.24□□□□□ -0.45
SNX17-202ENST00000427123 NUPR2A6NF83 97 aa12.24□□□□□ -0.45
SNX17-202ENST00000427123 UBE2BP63146 152 aa12.24□□□□□ -0.45
SNX17-202ENST00000427123 IGKV2-24A0A0C4DH68 120 aa12.23□□□□□ -0.45
SNX17-202ENST00000427123 ST20-AS1Q8NBB2 130 aa12.23□□□□□ -0.45
SNX17-202ENST00000427123 TNP2Q05952 138 aa12.21□□□□□ -0.45
SNX17-202ENST00000427123 BCE1O60756 84 aa12.21□□□□□ -0.46
SNX17-202ENST00000427123 ERC2-IT1O76042 136 aa12.21□□□□□ -0.46
SNX17-202ENST00000427123 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.2□□□□□ -0.46
SNX17-202ENST00000427123 A0A1W2PNN7 141 aa12.2□□□□□ -0.46
SNX17-202ENST00000427123 NBDYA0A0U1RRE5 68 aa12.19□□□□□ -0.46
SNX17-202ENST00000427123 A0A1B0GW54 56 aa12.19□□□□□ -0.46
SNX17-202ENST00000427123 SCXQ7RTU7 201 aa12.19□□□□□ -0.46
SNX17-202ENST00000427123 FUSP35637 526 aaKnown RBP eCLIP12.18□□□□□ -0.46
SNX17-202ENST00000427123 NREPQ16612 68 aa12.17□□□□□ -0.46
SNX17-202ENST00000427123 PKIGQ9Y2B9 76 aa12.17□□□□□ -0.46
SNX17-202ENST00000427123 DNAH10Q8IVF4 4471 aa12.17□□□□□ -0.46
SNX17-202ENST00000427123 C3orf84H3BNL1 204 aa12.16□□□□□ -0.46
SNX17-202ENST00000427123 C1orf137Q5JT78 98 aa12.16□□□□□ -0.46
SNX17-202ENST00000427123 LRCOL1A6NCL2 159 aa12.15□□□□□ -0.46
SNX17-202ENST00000427123 LYSTQ99698 3801 aa12.15□□□□□ -0.46
SNX17-202ENST00000427123 SMIM20Q8N5G0 67 aa12.14□□□□□ -0.47
SNX17-202ENST00000427123 A0A1W2PNM2 257 aa12.13□□□□□ -0.47
SNX17-202ENST00000427123 C9orf163Q8N9P6 203 aa12.13□□□□□ -0.47
SNX17-202ENST00000427123 Q8NBF4 154 aa12.13□□□□□ -0.47
SNX17-202ENST00000427123 TRAV7A0A075B6U4 112 aa12.11□□□□□ -0.47
SNX17-202ENST00000427123 CHTF8P0CG12 524 aa12.11□□□□□ -0.47
SNX17-202ENST00000427123 Q6ZRN7 208 aaPredicted RBP12.11□□□□□ -0.47
SNX17-202ENST00000427123 PRLHP81277 87 aa12.11□□□□□ -0.47
SNX17-202ENST00000427123 SMIM29Q86T20 159 aa12.11□□□□□ -0.47
SNX17-202ENST00000427123 CYSTM1Q9H1C7 97 aa12.11□□□□□ -0.47
SNX17-202ENST00000427123 BPY2O14599 106 aa12.1□□□□□ -0.47
SNX17-202ENST00000427123 F8WEM9 126 aa12.09□□□□□ -0.47
SNX17-202ENST00000427123 SPRR4Q96PI1 79 aa12.09□□□□□ -0.47
SNX17-202ENST00000427123 PHF5AQ7RTV0 110 aaKnown RBP12.08□□□□□ -0.48
SNX17-202ENST00000427123 IGKV4-1P06312 121 aa12.08□□□□□ -0.48
SNX17-202ENST00000427123 LINC00474Q9P2X8 69 aa12.07□□□□□ -0.48
SNX17-202ENST00000427123 TMEM258P61165 79 aa12.06□□□□□ -0.48
SNX17-202ENST00000427123 LINC00476Q8WZB0 136 aa12.06□□□□□ -0.48
SNX17-202ENST00000427123 HIGD2AQ9BW72 106 aa12.06□□□□□ -0.48
SNX17-202ENST00000427123 PLECQ15149 4684 aaKnown RBP12.05□□□□□ -0.48
SNX17-202ENST00000427123 CSMD3Q7Z407 3707 aa12.04□□□□□ -0.48
SNX17-202ENST00000427123 H0Y9J4 135 aa12.04□□□□□ -0.48
SNX17-202ENST00000427123 Q8N9L7 120 aa12.04□□□□□ -0.48
SNX17-202ENST00000427123 KRTAP11-1Q8IUC1 163 aa12.04□□□□□ -0.48
SNX17-202ENST00000427123 KRTAP21-3Q3LHN1 58 aa12.03□□□□□ -0.48
SNX17-202ENST00000427123 C20orf197Q8N268 126 aa12.02□□□□□ -0.49
SNX17-202ENST00000427123 DNAH7Q8WXX0 4024 aa12.02□□□□□ -0.49
SNX17-202ENST00000427123 IGLV8-61A0A075B6I0 122 aa12.01□□□□□ -0.49
SNX17-202ENST00000427123 EPM2AB3EWF7 344 aa12.01□□□□□ -0.49
SNX17-202ENST00000427123 IGFL1Q6UW32 110 aa12□□□□□ -0.49
SNX17-202ENST00000427123 UBE2AP49459 152 aa11.98□□□□□ -0.49
SNX17-202ENST00000427123 SPRR1BP22528 89 aa11.97□□□□□ -0.49
SNX17-202ENST00000427123 VPS13DQ5THJ4 4388 aa11.97□□□□□ -0.49
SNX17-202ENST00000427123 PANO1I0J062 215 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 166.6 ms