RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 SMIM13P0DJ93 91 aa3.65□□□□□ -1.83
NIF3L1-207ENST00000426253 FABP4P15090 132 aa3.65□□□□□ -1.83
NIF3L1-207ENST00000426253 RPL13AP40429 203 aaKnown RBP3.65□□□□□ -1.83
NIF3L1-207ENST00000426253 UBE2AP49459 152 aa3.65□□□□□ -1.83
NIF3L1-207ENST00000426253 PRR4Q16378 134 aa3.65□□□□□ -1.83
NIF3L1-207ENST00000426253 MYMXA0A1B0GTQ4 84 aa3.64□□□□□ -1.83
NIF3L1-207ENST00000426253 LINC00587B1AMM8 73 aa3.64□□□□□ -1.83
NIF3L1-207ENST00000426253 MEIG1Q5JSS6 88 aa3.64□□□□□ -1.83
NIF3L1-207ENST00000426253 FAM19A1Q7Z5A9 133 aa3.64□□□□□ -1.83
NIF3L1-207ENST00000426253 TMEM126AQ9H061 195 aa3.64□□□□□ -1.83
NIF3L1-207ENST00000426253 DHRS4-AS1Q9P1J3 65 aa3.64□□□□□ -1.83
NIF3L1-207ENST00000426253 HSPB8Q9UJY1 196 aa3.64□□□□□ -1.83
NIF3L1-207ENST00000426253 TMEM238C9JI98 176 aa3.63□□□□□ -1.83
NIF3L1-207ENST00000426253 M0R378 163 aa3.63□□□□□ -1.83
NIF3L1-207ENST00000426253 LEPROTO15243 131 aa3.63□□□□□ -1.83
NIF3L1-207ENST00000426253 DPM2O94777 84 aa3.63□□□□□ -1.83
NIF3L1-207ENST00000426253 CRYGAP11844 174 aa3.63□□□□□ -1.83
NIF3L1-207ENST00000426253 Q8NDZ9 215 aa3.63□□□□□ -1.83
NIF3L1-207ENST00000426253 MAP1LC3CQ9BXW4 147 aa3.63□□□□□ -1.83
NIF3L1-207ENST00000426253 NDUFA12Q9UI09 145 aa3.63□□□□□ -1.83
NIF3L1-207ENST00000426253 IGKCP01834 107 aa3.62□□□□□ -1.83
NIF3L1-207ENST00000426253 PLNP26678 52 aa3.62□□□□□ -1.83
NIF3L1-207ENST00000426253 PRLHP81277 87 aa3.62□□□□□ -1.83
NIF3L1-207ENST00000426253 KRTAP13-1Q8IUC0 172 aa3.62□□□□□ -1.83
NIF3L1-207ENST00000426253 BOD1L2Q8IYS8 172 aa3.62□□□□□ -1.83
NIF3L1-207ENST00000426253 MIR7-3HGQ8N6C7 128 aa3.62□□□□□ -1.83
NIF3L1-207ENST00000426253 TYMSOSQ8TAI1 123 aa3.62□□□□□ -1.83
NIF3L1-207ENST00000426253 PLEKHB2Q96CS7 222 aa3.62□□□□□ -1.83
NIF3L1-207ENST00000426253 PMCHL2Q9BQD1 86 aa3.62□□□□□ -1.83
NIF3L1-207ENST00000426253 ANAPC11Q9NYG5 84 aa3.62□□□□□ -1.83
NIF3L1-207ENST00000426253 J3QQQ9 107 aa3.61□□□□□ -1.83
NIF3L1-207ENST00000426253 TSPAN13O95857 204 aa3.61□□□□□ -1.83
NIF3L1-207ENST00000426253 HERVK_113P61574 105 aa3.61□□□□□ -1.83
NIF3L1-207ENST00000426253 IGKV2D-26A0A0A0MRZ7 120 aa3.6□□□□□ -1.83
NIF3L1-207ENST00000426253 NCR3O14931 201 aa3.6□□□□□ -1.83
NIF3L1-207ENST00000426253 HIST1H2BKO60814 126 aa3.6□□□□□ -1.83
NIF3L1-207ENST00000426253 HIST1H2BJP06899 126 aa3.6□□□□□ -1.83
NIF3L1-207ENST00000426253 LGALS3P17931 250 aaKnown RBP3.6□□□□□ -1.83
NIF3L1-207ENST00000426253 HIST1H2BOP23527 126 aa3.6□□□□□ -1.83
NIF3L1-207ENST00000426253 HIST1H2BBP33778 126 aa3.6□□□□□ -1.83
NIF3L1-207ENST00000426253 NMUP48645 174 aa3.6□□□□□ -1.83
NIF3L1-207ENST00000426253 HIST1H2BDP58876 126 aa3.6□□□□□ -1.83
NIF3L1-207ENST00000426253 TSPEAR-AS2P59090 65 aa3.6□□□□□ -1.83
NIF3L1-207ENST00000426253 HIST1H2BCP62807 126 aa3.6□□□□□ -1.83
NIF3L1-207ENST00000426253 HIST2H2BEQ16778 126 aa3.6□□□□□ -1.83
NIF3L1-207ENST00000426253 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.6□□□□□ -1.83
NIF3L1-207ENST00000426253 HIST1H2BHQ93079 126 aa3.6□□□□□ -1.83
NIF3L1-207ENST00000426253 HIST1H2BNQ99877 126 aa3.6□□□□□ -1.83
NIF3L1-207ENST00000426253 HIST1H2BMQ99879 126 aa3.6□□□□□ -1.83
NIF3L1-207ENST00000426253 LOC107984156A0A0G2JMH3 177 aa3.59□□□□□ -1.83
NIF3L1-207ENST00000426253 S100A12P80511 92 aa3.59□□□□□ -1.83
NIF3L1-207ENST00000426253 FAM229BQ4G0N7 80 aa3.59□□□□□ -1.83
NIF3L1-207ENST00000426253 KRTAP13-2Q52LG2 175 aa3.59□□□□□ -1.83
NIF3L1-207ENST00000426253 ARL17AQ8IVW1 177 aa3.59□□□□□ -1.83
NIF3L1-207ENST00000426253 DAND5Q8N907 189 aa3.59□□□□□ -1.83
NIF3L1-207ENST00000426253 HIGD2AQ9BW72 106 aa3.59□□□□□ -1.83
NIF3L1-207ENST00000426253 KCNQ1DNQ9H478 68 aa3.59□□□□□ -1.83
NIF3L1-207ENST00000426253 E9PLD3 99 aa3.58□□□□□ -1.84
NIF3L1-207ENST00000426253 SYS1-DBNDD2H3BUS1 97 aa3.58□□□□□ -1.84
NIF3L1-207ENST00000426253 LINC00337Q8N6G1 96 aa3.58□□□□□ -1.84
NIF3L1-207ENST00000426253 SMCR5Q8TEV8 140 aa3.58□□□□□ -1.84
NIF3L1-207ENST00000426253 A0A0J9YXY3 114 aa3.57□□□□□ -1.84
NIF3L1-207ENST00000426253 TRBV10-3A0A0K0K1G6 114 aa3.57□□□□□ -1.84
NIF3L1-207ENST00000426253 ETDCA0A1B0GVM5 59 aa3.57□□□□□ -1.84
NIF3L1-207ENST00000426253 DDTP30046 118 aa3.57□□□□□ -1.84
NIF3L1-207ENST00000426253 SPRR1AP35321 89 aa3.57□□□□□ -1.84
NIF3L1-207ENST00000426253 NPC2P61916 151 aa3.57□□□□□ -1.84
NIF3L1-207ENST00000426253 Q1RN00 199 aa3.57□□□□□ -1.84
NIF3L1-207ENST00000426253 MIEN1Q9BRT3 115 aa3.57□□□□□ -1.84
NIF3L1-207ENST00000426253 TRBV10-2A0A0K0K1G8 114 aa3.56□□□□□ -1.84
NIF3L1-207ENST00000426253 KRTAP4-16G5E9R7 235 aaPredicted RBP3.56□□□□□ -1.84
NIF3L1-207ENST00000426253 NDUFC2O95298 119 aa3.56□□□□□ -1.84
NIF3L1-207ENST00000426253 C3orf79P0CE67 100 aa3.56□□□□□ -1.84
NIF3L1-207ENST00000426253 S100A7L2Q5SY68 101 aa3.56□□□□□ -1.84
NIF3L1-207ENST00000426253 LINC01545Q5VT33 79 aa3.56□□□□□ -1.84
NIF3L1-207ENST00000426253 LINC00304Q8N9R0 145 aa3.56□□□□□ -1.84
NIF3L1-207ENST00000426253 SPRR4Q96PI1 79 aa3.56□□□□□ -1.84
NIF3L1-207ENST00000426253 PPDPFQ9H3Y8 114 aa3.56□□□□□ -1.84
NIF3L1-207ENST00000426253 ZNF706Q9Y5V0 76 aaPredicted RBP3.56□□□□□ -1.84
NIF3L1-207ENST00000426253 KRTDAPP60985 99 aa3.55□□□□□ -1.84
NIF3L1-207ENST00000426253 COA6Q5JTJ3 125 aaKnown RBP3.55□□□□□ -1.84
NIF3L1-207ENST00000426253 C3orf22Q8N5N4 141 aa3.55□□□□□ -1.84
NIF3L1-207ENST00000426253 SPANXB1Q9NS25 103 aaPredicted RBP3.55□□□□□ -1.84
NIF3L1-207ENST00000426253 SYNE2Q8WXH0 6885 aaKnown RBP3.55□□□□□ -1.84
NIF3L1-207ENST00000426253 IGLV6-57P01721 117 aa3.54□□□□□ -1.84
NIF3L1-207ENST00000426253 CTAG1AP78358 180 aa3.54□□□□□ -1.84
NIF3L1-207ENST00000426253 CXCL6P80162 114 aa3.54□□□□□ -1.84
NIF3L1-207ENST00000426253 SPAG11AQ6PDA7 123 aa3.54□□□□□ -1.84
NIF3L1-207ENST00000426253 SOSTDC1Q6X4U4 206 aa3.54□□□□□ -1.84
NIF3L1-207ENST00000426253 LINC00308Q8TCZ7 52 aa3.54□□□□□ -1.84
NIF3L1-207ENST00000426253 TRAV23DV6A0A075B6W5 121 aa3.53□□□□□ -1.84
NIF3L1-207ENST00000426253 ZNF815PA8K554 130 aa3.53□□□□□ -1.84
NIF3L1-207ENST00000426253 TIMM17BO60830 172 aa3.53□□□□□ -1.84
NIF3L1-207ENST00000426253 ERC2-IT1O76042 136 aa3.53□□□□□ -1.84
NIF3L1-207ENST00000426253 HINT1P49773 126 aaPredicted RBP3.53□□□□□ -1.84
NIF3L1-207ENST00000426253 JOSD1Q15040 202 aaPredicted RBP3.53□□□□□ -1.84
NIF3L1-207ENST00000426253 OR13C6PQ8NH95 151 aa3.53□□□□□ -1.84
NIF3L1-207ENST00000426253 RETNLBQ9BQ08 111 aa3.53□□□□□ -1.84
NIF3L1-207ENST00000426253 CBY1Q9Y3M2 126 aa3.53□□□□□ -1.84
NIF3L1-207ENST00000426253 C20orf202A1L168 122 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms