RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 ETDCA0A1B0GVM5 59 aa14.78□□□□□ -0.04
APOE-202ENST00000425718 ZNF861PO60384 105 aa14.78□□□□□ -0.04
APOE-202ENST00000425718 SPRR1AP35321 89 aa14.78□□□□□ -0.04
APOE-202ENST00000425718 KRTAP17-1Q9BYP8 105 aa14.78□□□□□ -0.04
APOE-202ENST00000425718 SRRM2Q9UQ35 2752 aaKnown RBP14.78□□□□□ -0.04
APOE-202ENST00000425718 FAM19A1Q7Z5A9 133 aa14.77□□□□□ -0.05
APOE-202ENST00000425718 H0Y9J4 135 aa14.76□□□□□ -0.05
APOE-202ENST00000425718 INAFM2P0DMQ5 153 aa14.76□□□□□ -0.05
APOE-202ENST00000425718 DIRC1Q969H9 104 aa14.76□□□□□ -0.05
APOE-202ENST00000425718 ZNF73O43830 326 aaPredicted RBP14.74□□□□□ -0.05
APOE-202ENST00000425718 RAB37Q96AX2 223 aa14.74□□□□□ -0.05
APOE-202ENST00000425718 A0A0B4J2C4 111 aa14.73□□□□□ -0.05
APOE-202ENST00000425718 KRTAP4-16G5E9R7 235 aaPredicted RBP14.7□□□□□ -0.06
APOE-202ENST00000425718 KRTAP4-5Q9BYR2 181 aa14.7□□□□□ -0.06
APOE-202ENST00000425718 TRBV7-6A0A0J9YX20 115 aa14.69□□□□□ -0.06
APOE-202ENST00000425718 KRTAP13-1Q8IUC0 172 aa14.69□□□□□ -0.06
APOE-202ENST00000425718 CFC1BP0CG36 223 aa14.68□□□□□ -0.06
APOE-202ENST00000425718 CFC1P0CG37 223 aa14.68□□□□□ -0.06
APOE-202ENST00000425718 M0R143 59 aa14.67□□□□□ -0.06
APOE-202ENST00000425718 RPL13AP40429 203 aaKnown RBP14.67□□□□□ -0.06
APOE-202ENST00000425718 FXYD2P54710 66 aa14.67□□□□□ -0.06
APOE-202ENST00000425718 PKHD1L1Q86WI1 4243 aa14.67□□□□□ -0.06
APOE-202ENST00000425718 B5MCH6 92 aa14.66□□□□□ -0.06
APOE-202ENST00000425718 PRLHP81277 87 aa14.66□□□□□ -0.06
APOE-202ENST00000425718 Q6ZRX8 168 aa14.66□□□□□ -0.06
APOE-202ENST00000425718 VAMP3Q15836 100 aa14.65□□□□□ -0.06
APOE-202ENST00000425718 C6orf99Q4VX62 202 aa14.65□□□□□ -0.06
APOE-202ENST00000425718 A0A1B0GWB2 263 aa14.64□□□□□ -0.07
APOE-202ENST00000425718 SMIM11BQ8TCY0 68 aa14.63□□□□□ -0.07
APOE-202ENST00000425718 PRO1854Q9UHT4 67 aa14.63□□□□□ -0.07
APOE-202ENST00000425718 COX7BP24311 80 aa14.62□□□□□ -0.07
APOE-202ENST00000425718 CTAG1AP78358 180 aa14.62□□□□□ -0.07
APOE-202ENST00000425718 HIGD2AQ9BW72 106 aa14.62□□□□□ -0.07
APOE-202ENST00000425718 NHP2Q9NX24 153 aaKnown RBP14.62□□□□□ -0.07
APOE-202ENST00000425718 FLG2Q5D862 2391 aaPredicted RBP14.61□□□□□ -0.07
APOE-202ENST00000425718 ELOF1P60002 83 aaKnown RBP14.6□□□□□ -0.07
APOE-202ENST00000425718 BVES-AS1Q5T3Y7 98 aa14.6□□□□□ -0.07
APOE-202ENST00000425718 DHRS4-AS1Q9P1J3 65 aa14.6□□□□□ -0.07
APOE-202ENST00000425718 ZNF706Q9Y5V0 76 aaPredicted RBP14.6□□□□□ -0.07
APOE-202ENST00000425718 Q1RN00 199 aa14.58□□□□□ -0.08
APOE-202ENST00000425718 OXTP01178 125 aa14.56□□□□□ -0.08
APOE-202ENST00000425718 H7C2G1 150 aa14.54□□□□□ -0.08
APOE-202ENST00000425718 SMCR5Q8TEV8 140 aa14.54□□□□□ -0.08
APOE-202ENST00000425718 SLC25A20O43772 301 aa14.53□□□□□ -0.08
APOE-202ENST00000425718 Q9BRP9 147 aa14.52□□□□□ -0.09
APOE-202ENST00000425718 SNCGO76070 127 aa14.51□□□□□ -0.09
APOE-202ENST00000425718 H0YGX0 51 aa14.49□□□□□ -0.09
APOE-202ENST00000425718 KRTAP29-1A8MX34 341 aaPredicted RBP14.48□□□□□ -0.09
APOE-202ENST00000425718 ABCA13Q86UQ4 5058 aa14.48□□□□□ -0.09
APOE-202ENST00000425718 COX6CP09669 75 aa14.47□□□□□ -0.09
APOE-202ENST00000425718 FAM229BQ4G0N7 80 aa14.47□□□□□ -0.09
APOE-202ENST00000425718 LINC01600Q96MT4 127 aa14.47□□□□□ -0.09
APOE-202ENST00000425718 SPRR4Q96PI1 79 aa14.46□□□□□ -0.09
APOE-202ENST00000425718 K7ERJ3 54 aa14.45□□□□□ -0.1
APOE-202ENST00000425718 KRTAP1-4P0C5Y4 121 aa14.44□□□□□ -0.1
APOE-202ENST00000425718 PSMB2P49721 201 aa14.43□□□□□ -0.1
APOE-202ENST00000425718 LINC00575Q6W349 94 aa14.43□□□□□ -0.1
APOE-202ENST00000425718 ERC2-IT1O76042 136 aa14.42□□□□□ -0.1
APOE-202ENST00000425718 CRYGAP11844 174 aa14.42□□□□□ -0.1
APOE-202ENST00000425718 hADV29S1A0JD25 119 aa14.41□□□□□ -0.1
APOE-202ENST00000425718 A0A1B0GX51 115 aa14.4□□□□□ -0.1
APOE-202ENST00000425718 TSPAN13O95857 204 aa14.4□□□□□ -0.1
APOE-202ENST00000425718 BATFQ16520 125 aa14.39□□□□□ -0.11
APOE-202ENST00000425718 LINC00483Q53H64 154 aa14.39□□□□□ -0.11
APOE-202ENST00000425718 TRIAP1O43715 76 aa14.38□□□□□ -0.11
APOE-202ENST00000425718 MYCBP2O75592 4640 aa14.37□□□□□ -0.11
APOE-202ENST00000425718 J3QL48 77 aa14.37□□□□□ -0.11
APOE-202ENST00000425718 GAGE2AQ6NT46 116 aa14.37□□□□□ -0.11
APOE-202ENST00000425718 FAT3Q8TDW7 4589 aa14.36□□□□□ -0.11
APOE-202ENST00000425718 GHRHP01286 108 aa14.35□□□□□ -0.11
APOE-202ENST00000425718 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.34□□□□□ -0.11
APOE-202ENST00000425718 TEX49A0A1B0GTD5 131 aa14.33□□□□□ -0.12
APOE-202ENST00000425718 SCGB1C2P0DMR2 95 aa14.33□□□□□ -0.12
APOE-202ENST00000425718 SPRR1BP22528 89 aa14.33□□□□□ -0.12
APOE-202ENST00000425718 OCIAD2Q56VL3 154 aa14.32□□□□□ -0.12
APOE-202ENST00000425718 LYRM7Q5U5X0 104 aa14.32□□□□□ -0.12
APOE-202ENST00000425718 PRR26Q8N8Z3 221 aa14.32□□□□□ -0.12
APOE-202ENST00000425718 LRP1Q07954 4544 aaKnown RBP14.31□□□□□ -0.12
APOE-202ENST00000425718 ST20-AS1Q8NBB2 130 aa14.31□□□□□ -0.12
APOE-202ENST00000425718 IGLV5-48A0A075B6I7 105 aa14.3□□□□□ -0.12
APOE-202ENST00000425718 KRTAP10-8P60410 259 aa14.3□□□□□ -0.12
APOE-202ENST00000425718 PPDPFLQ8WWR9 84 aa14.3□□□□□ -0.12
APOE-202ENST00000425718 PCLOQ9Y6V0 5065 aa14.29□□□□□ -0.12
APOE-202ENST00000425718 Q6ZQY7 126 aa14.29□□□□□ -0.12
APOE-202ENST00000425718 TYMSOSQ8TAI1 123 aa14.29□□□□□ -0.12
APOE-202ENST00000425718 LAMTOR3Q9UHA4 124 aa14.29□□□□□ -0.12
APOE-202ENST00000425718 A0A087X002 238 aa14.28□□□□□ -0.12
APOE-202ENST00000425718 ANAPC11Q9NYG5 84 aa14.28□□□□□ -0.12
APOE-202ENST00000425718 DMBT1Q9UGM3 2413 aaPredicted RBP14.27□□□□□ -0.12
APOE-202ENST00000425718 H3BQ85 93 aa14.27□□□□□ -0.13
APOE-202ENST00000425718 DNAL4O96015 105 aa14.27□□□□□ -0.13
APOE-202ENST00000425718 DEFB105AQ8NG35 78 aa14.27□□□□□ -0.13
APOE-202ENST00000425718 PCP4L1A6NKN8 68 aa14.25□□□□□ -0.13
APOE-202ENST00000425718 MT1HL1P0DM35 61 aa14.25□□□□□ -0.13
APOE-202ENST00000425718 FAM218AQ96MZ4 157 aa14.24□□□□□ -0.13
APOE-202ENST00000425718 SNHG12Q9BXW3 62 aa14.24□□□□□ -0.13
APOE-202ENST00000425718 CLEC2BQ92478 149 aa14.23□□□□□ -0.13
APOE-202ENST00000425718 LINC01547P58512 204 aaPredicted RBP14.22□□□□□ -0.13
APOE-202ENST00000425718 COL5A1-AS1Q5SY13 56 aa14.22□□□□□ -0.13
APOE-202ENST00000425718 KRTAP13-2Q52LG2 175 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms