RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 X6R8D5 127 aa9.51□□□□□ -0.89
SREBF2-202ENST00000424354 COL12A1Q99715 3063 aa9.51□□□□□ -0.89
SREBF2-202ENST00000424354 LITAFQ99732 161 aa9.51□□□□□ -0.89
SREBF2-202ENST00000424354 LINC00167Q96N53 147 aa9.5□□□□□ -0.89
SREBF2-202ENST00000424354 TM2D3Q9BRN9 247 aa9.49□□□□□ -0.89
SREBF2-202ENST00000424354 IGSF10Q6WRI0 2623 aa9.49□□□□□ -0.89
SREBF2-202ENST00000424354 SPAG11AQ6PDA7 123 aa9.49□□□□□ -0.89
SREBF2-202ENST00000424354 ERC2-IT1O76042 136 aa9.49□□□□□ -0.89
SREBF2-202ENST00000424354 Q6ZRX8 168 aa9.47□□□□□ -0.89
SREBF2-202ENST00000424354 C7orf65Q6ZTY9 151 aa9.46□□□□□ -0.89
SREBF2-202ENST00000424354 H3BNG1 76 aa9.46□□□□□ -0.9
SREBF2-202ENST00000424354 TRAV22A0A0B4J277 110 aa9.45□□□□□ -0.9
SREBF2-202ENST00000424354 IGKV2D-30A0A075B6S6 120 aa9.45□□□□□ -0.9
SREBF2-202ENST00000424354 IGKV2-30P06310 120 aa9.45□□□□□ -0.9
SREBF2-202ENST00000424354 LINC00476Q8WZB0 136 aa9.44□□□□□ -0.9
SREBF2-202ENST00000424354 A0A096LNT2 108 aa9.44□□□□□ -0.9
SREBF2-202ENST00000424354 KLK9Q2XQG4 91 aa9.44□□□□□ -0.9
SREBF2-202ENST00000424354 TEP1Q99973 2627 aaKnown RBP9.44□□□□□ -0.9
SREBF2-202ENST00000424354 CHD6Q8TD26 2715 aa9.43□□□□□ -0.9
SREBF2-202ENST00000424354 SERTAD4-AS1Q5TG53 156 aa9.43□□□□□ -0.9
SREBF2-202ENST00000424354 KALRNO60229 2985 aa9.43□□□□□ -0.9
SREBF2-202ENST00000424354 FHL3Q13643 280 aa9.42□□□□□ -0.9
SREBF2-202ENST00000424354 MGAM2Q2M2H8 2515 aa9.42□□□□□ -0.9
SREBF2-202ENST00000424354 GVQW2A0A096LPI5 108 aaPredicted RBP9.42□□□□□ -0.9
SREBF2-202ENST00000424354 C8orf87E5RJ46 101 aa9.4□□□□□ -0.9
SREBF2-202ENST00000424354 MAST4O15021 2626 aa9.4□□□□□ -0.9
SREBF2-202ENST00000424354 TRBV7-4A0A0J9YYF1 115 aa9.4□□□□□ -0.91
SREBF2-202ENST00000424354 MOBPQ13875 183 aa9.39□□□□□ -0.91
SREBF2-202ENST00000424354 KRTAP1-3Q8IUG1 177 aa9.39□□□□□ -0.91
SREBF2-202ENST00000424354 TACC2O95359 2948 aa9.39□□□□□ -0.91
SREBF2-202ENST00000424354 IGLV6-57P01721 117 aa9.39□□□□□ -0.91
SREBF2-202ENST00000424354 CYP4F30PQ9H0H9 118 aa9.38□□□□□ -0.91
SREBF2-202ENST00000424354 LRBAP50851 2863 aa9.37□□□□□ -0.91
SREBF2-202ENST00000424354 MDFIQ99750 246 aa9.37□□□□□ -0.91
SREBF2-202ENST00000424354 ATP11AUNQ6ZP68 121 aa9.37□□□□□ -0.91
SREBF2-202ENST00000424354 KLKP1Q107X0 134 aa9.35□□□□□ -0.91
SREBF2-202ENST00000424354 KRTAP24-1Q3LI83 254 aa9.35□□□□□ -0.91
SREBF2-202ENST00000424354 LOC101927531A0A1B0GV80 90 aa9.34□□□□□ -0.91
SREBF2-202ENST00000424354 ST20-AS1Q8NBB2 130 aa9.34□□□□□ -0.91
SREBF2-202ENST00000424354 MUC4Q99102 2169 aa9.33□□□□□ -0.92
SREBF2-202ENST00000424354 VPREB1P12018 145 aa9.33□□□□□ -0.92
SREBF2-202ENST00000424354 A8MWP4 228 aa9.32□□□□□ -0.92
SREBF2-202ENST00000424354 EPM2AB3EWF7 344 aa9.32□□□□□ -0.92
SREBF2-202ENST00000424354 KRTAP21-3Q3LHN1 58 aa9.32□□□□□ -0.92
SREBF2-202ENST00000424354 C16orf90A8MZG2 172 aa9.32□□□□□ -0.92
SREBF2-202ENST00000424354 WDFY3Q8IZQ1 3526 aa9.31□□□□□ -0.92
SREBF2-202ENST00000424354 RPL37AP61513 92 aaKnown RBP9.31□□□□□ -0.92
SREBF2-202ENST00000424354 A8MUN3 132 aa9.3□□□□□ -0.92
SREBF2-202ENST00000424354 LINC00313P59037 77 aa9.3□□□□□ -0.92
SREBF2-202ENST00000424354 COA5Q86WW8 74 aa9.3□□□□□ -0.92
SREBF2-202ENST00000424354 K7EQZ3 153 aa9.29□□□□□ -0.92
SREBF2-202ENST00000424354 SPACA4Q8TDM5 124 aa9.29□□□□□ -0.92
SREBF2-202ENST00000424354 PHF5AQ7RTV0 110 aaKnown RBP9.29□□□□□ -0.92
SREBF2-202ENST00000424354 Q6ZRP5 223 aa9.27□□□□□ -0.92
SREBF2-202ENST00000424354 GCN1Q92616 2671 aaKnown RBP9.27□□□□□ -0.92
SREBF2-202ENST00000424354 Q8NAQ8 132 aa9.26□□□□□ -0.93
SREBF2-202ENST00000424354 KRTAP1-1Q07627 177 aa9.26□□□□□ -0.93
SREBF2-202ENST00000424354 KCNQ1DNQ9H478 68 aa9.26□□□□□ -0.93
SREBF2-202ENST00000424354 TEX15Q9BXT5 2789 aa9.26□□□□□ -0.93
SREBF2-202ENST00000424354 LINC00528Q8N1L1 170 aa9.26□□□□□ -0.93
SREBF2-202ENST00000424354 UNC79Q9P2D8 2635 aa9.26□□□□□ -0.93
SREBF2-202ENST00000424354 ITPR1Q14643 2758 aa9.25□□□□□ -0.93
SREBF2-202ENST00000424354 FAM229AH3BQW9 127 aa9.25□□□□□ -0.93
SREBF2-202ENST00000424354 MRPL34Q9BQ48 92 aaKnown RBP9.25□□□□□ -0.93
SREBF2-202ENST00000424354 H7BZZ5 65 aa9.24□□□□□ -0.93
SREBF2-202ENST00000424354 EIF4EBP3O60516 100 aaPredicted RBP9.24□□□□□ -0.93
SREBF2-202ENST00000424354 DMDP11532 3685 aa9.23□□□□□ -0.93
SREBF2-202ENST00000424354 ASPMQ8IZT6 3477 aa9.22□□□□□ -0.93
SREBF2-202ENST00000424354 IGLV1-50A0A075B6I6 118 aa9.22□□□□□ -0.93
SREBF2-202ENST00000424354 DCHS1Q96JQ0 3298 aa9.22□□□□□ -0.93
SREBF2-202ENST00000424354 LINC00336Q6ZUF6 198 aa9.22□□□□□ -0.93
SREBF2-202ENST00000424354 UQCR11O14957 56 aa9.22□□□□□ -0.93
SREBF2-202ENST00000424354 WWC2-AS2Q96NR7 200 aa9.21□□□□□ -0.94
SREBF2-202ENST00000424354 CD164Q04900 197 aa9.2□□□□□ -0.94
SREBF2-202ENST00000424354 DNAH10OSP0CZ25 163 aa9.2□□□□□ -0.94
SREBF2-202ENST00000424354 LINC01600Q96MT4 127 aa9.2□□□□□ -0.94
SREBF2-202ENST00000424354 LINC00588Q9Y4M8 146 aa9.2□□□□□ -0.94
SREBF2-202ENST00000424354 UBR5O95071 2799 aaPredicted RBP9.19□□□□□ -0.94
SREBF2-202ENST00000424354 IGLV8-61A0A075B6I0 122 aa9.19□□□□□ -0.94
SREBF2-202ENST00000424354 PRR15Q8IV56 129 aa9.18□□□□□ -0.94
SREBF2-202ENST00000424354 ZANQ9Y493 2812 aa9.18□□□□□ -0.94
SREBF2-202ENST00000424354 SPINT4Q6UDR6 99 aa9.18□□□□□ -0.94
SREBF2-202ENST00000424354 RTL8CO15255 209 aa9.17□□□□□ -0.94
SREBF2-202ENST00000424354 IGFL1Q6UW32 110 aa9.17□□□□□ -0.94
SREBF2-202ENST00000424354 LAMA5O15230 3695 aa9.17□□□□□ -0.94
SREBF2-202ENST00000424354 ITPR2Q14571 2701 aa9.17□□□□□ -0.94
SREBF2-202ENST00000424354 STAB1Q9NY15 2570 aa9.17□□□□□ -0.94
SREBF2-202ENST00000424354 NBDYA0A0U1RRE5 68 aa9.16□□□□□ -0.94
SREBF2-202ENST00000424354 FAM168BA1KXE4 195 aa9.16□□□□□ -0.94
SREBF2-202ENST00000424354 CSNK1G2-AS1Q8NCQ2 148 aa9.15□□□□□ -0.94
SREBF2-202ENST00000424354 CHTF8P0CG12 524 aa9.15□□□□□ -0.94
SREBF2-202ENST00000424354 PRR34Q9NV39 138 aa9.15□□□□□ -0.95
SREBF2-202ENST00000424354 C8orf17Q9NRJ1 99 aa9.14□□□□□ -0.95
SREBF2-202ENST00000424354 TYMSOSQ8TAI1 123 aa9.14□□□□□ -0.95
SREBF2-202ENST00000424354 KTN1-AS1Q86SY8 53 aa9.14□□□□□ -0.95
SREBF2-202ENST00000424354 NOTCH1P46531 2555 aa9.13□□□□□ -0.95
SREBF2-202ENST00000424354 Q8N377 158 aa9.13□□□□□ -0.95
SREBF2-202ENST00000424354 COL6A5A8TX70 2615 aa9.13□□□□□ -0.95
SREBF2-202ENST00000424354 Q96NJ1 140 aa9.12□□□□□ -0.95
SREBF2-202ENST00000424354 MIR22HGQ0VDD5 57 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms