RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 HIGD2AQ9BW72 106 aa6.53□□□□□ -1.36
USP49-204ENST00000423567 SPANXB1Q9NS25 103 aaPredicted RBP6.53□□□□□ -1.36
USP49-204ENST00000423567 ETDCA0A1B0GVM5 59 aa6.52□□□□□ -1.37
USP49-204ENST00000423567 NDUFC2O95298 119 aa6.52□□□□□ -1.37
USP49-204ENST00000423567 S100A6P06703 90 aa6.52□□□□□ -1.37
USP49-204ENST00000423567 DDTP30046 118 aa6.52□□□□□ -1.37
USP49-204ENST00000423567 NPC2P61916 151 aa6.52□□□□□ -1.37
USP49-204ENST00000423567 S100A7L2Q5SY68 101 aa6.52□□□□□ -1.37
USP49-204ENST00000423567 KCNQ1DNQ9H478 68 aa6.52□□□□□ -1.37
USP49-204ENST00000423567 TIMM17BO60830 172 aa6.51□□□□□ -1.37
USP49-204ENST00000423567 LINC00337Q8N6G1 96 aa6.51□□□□□ -1.37
USP49-204ENST00000423567 KRTAP4-2Q9BYR5 136 aa6.51□□□□□ -1.37
USP49-204ENST00000423567 FAM229BQ4G0N7 80 aa6.5□□□□□ -1.37
USP49-204ENST00000423567 ADAMTSL4-AS1Q5T5F5 129 aa6.5□□□□□ -1.37
USP49-204ENST00000423567 SCGB1D4Q6XE38 83 aa6.5□□□□□ -1.37
USP49-204ENST00000423567 TYMSOSQ8TAI1 123 aa6.5□□□□□ -1.37
USP49-204ENST00000423567 ZNF706Q9Y5V0 76 aaPredicted RBP6.5□□□□□ -1.37
USP49-204ENST00000423567 A0A087X002 238 aa6.49□□□□□ -1.37
USP49-204ENST00000423567 HIST3H2BBQ8N257 126 aa6.49□□□□□ -1.37
USP49-204ENST00000423567 CBY1Q9Y3M2 126 aa6.49□□□□□ -1.37
USP49-204ENST00000423567 SPRR1AP35321 89 aa6.48□□□□□ -1.37
USP49-204ENST00000423567 SNRPEP62304 92 aaKnown RBP6.48□□□□□ -1.37
USP49-204ENST00000423567 LCE5AQ5TCM9 118 aa6.48□□□□□ -1.37
USP49-204ENST00000423567 SOSTDC1Q6X4U4 206 aa6.48□□□□□ -1.37
USP49-204ENST00000423567 ATOH7Q8N100 152 aa6.48□□□□□ -1.37
USP49-204ENST00000423567 LINC00308Q8TCZ7 52 aa6.48□□□□□ -1.37
USP49-204ENST00000423567 KRTAP9-3Q9BYQ3 159 aa6.48□□□□□ -1.37
USP49-204ENST00000423567 TTTY13Q9BZ97 58 aa6.48□□□□□ -1.37
USP49-204ENST00000423567 SPANXCQ9NY87 97 aa6.48□□□□□ -1.37
USP49-204ENST00000423567 ANAPC11Q9NYG5 84 aa6.48□□□□□ -1.37
USP49-204ENST00000423567 HSBP1L1C9JCN9 74 aa6.47□□□□□ -1.37
USP49-204ENST00000423567 COPS9Q8WXC6 57 aa6.47□□□□□ -1.37
USP49-204ENST00000423567 LITAFQ99732 161 aa6.47□□□□□ -1.37
USP49-204ENST00000423567 HIST1H2BLQ99880 126 aa6.47□□□□□ -1.37
USP49-204ENST00000423567 KRTAP4-11Q9BYQ6 195 aa6.47□□□□□ -1.37
USP49-204ENST00000423567 TRAV23DV6A0A075B6W5 121 aa6.46□□□□□ -1.38
USP49-204ENST00000423567 IGLV6-57P01721 117 aa6.46□□□□□ -1.38
USP49-204ENST00000423567 B5MCH6 92 aa6.45□□□□□ -1.38
USP49-204ENST00000423567 KRTAP4-16G5E9R7 235 aaPredicted RBP6.45□□□□□ -1.38
USP49-204ENST00000423567 HINT1P49773 126 aaPredicted RBP6.45□□□□□ -1.38
USP49-204ENST00000423567 JOSD1Q15040 202 aaPredicted RBP6.45□□□□□ -1.38
USP49-204ENST00000423567 LINC00518Q8N0U6 118 aa6.45□□□□□ -1.38
USP49-204ENST00000423567 OR13C6PQ8NH95 151 aa6.45□□□□□ -1.38
USP49-204ENST00000423567 SMCR5Q8TEV8 140 aa6.45□□□□□ -1.38
USP49-204ENST00000423567 SPRR4Q96PI1 79 aa6.45□□□□□ -1.38
USP49-204ENST00000423567 ZNF73O43830 326 aaPredicted RBP6.44□□□□□ -1.38
USP49-204ENST00000423567 TSPAN13O95857 204 aa6.43□□□□□ -1.38
USP49-204ENST00000423567 IFITM1P13164 125 aa6.43□□□□□ -1.38
USP49-204ENST00000423567 KRTAP13-2Q52LG2 175 aa6.43□□□□□ -1.38
USP49-204ENST00000423567 Q6ZRX8 168 aa6.43□□□□□ -1.38
USP49-204ENST00000423567 Q6ZVH6 145 aa6.43□□□□□ -1.38
USP49-204ENST00000423567 LINC00304Q8N9R0 145 aa6.43□□□□□ -1.38
USP49-204ENST00000423567 SPANXDQ9BXN6 97 aa6.43□□□□□ -1.38
USP49-204ENST00000423567 PCP2Q8IVA1 136 aa6.42□□□□□ -1.38
USP49-204ENST00000423567 SCGB1D1O95968 90 aa6.41□□□□□ -1.38
USP49-204ENST00000423567 PRR4Q16378 134 aa6.41□□□□□ -1.38
USP49-204ENST00000423567 GAGE2AQ6NT46 116 aa6.41□□□□□ -1.38
USP49-204ENST00000423567 PPDPFQ9H3Y8 114 aa6.41□□□□□ -1.38
USP49-204ENST00000423567 C5orf52A6NGY3 159 aa6.39□□□□□ -1.39
USP49-204ENST00000423567 C3orf22Q8N5N4 141 aa6.39□□□□□ -1.39
USP49-204ENST00000423567 Q9BRP9 147 aa6.39□□□□□ -1.39
USP49-204ENST00000423567 ERC2-IT1O76042 136 aa6.38□□□□□ -1.39
USP49-204ENST00000423567 LINC00483Q53H64 154 aa6.38□□□□□ -1.39
USP49-204ENST00000423567 MUSTN1Q8IVN3 82 aa6.38□□□□□ -1.39
USP49-204ENST00000423567 A6NDN8 102 aa6.37□□□□□ -1.39
USP49-204ENST00000423567 CTAG1AP78358 180 aa6.37□□□□□ -1.39
USP49-204ENST00000423567 SPAG11AQ6PDA7 123 aa6.37□□□□□ -1.39
USP49-204ENST00000423567 DHRS4-AS1Q9P1J3 65 aa6.37□□□□□ -1.39
USP49-204ENST00000423567 LRP2P98164 4655 aa6.37□□□□□ -1.39
USP49-204ENST00000423567 COX7BP24311 80 aa6.36□□□□□ -1.39
USP49-204ENST00000423567 UBR4Q5T4S7 5183 aa6.36□□□□□ -1.39
USP49-204ENST00000423567 IGLV9-49A0A0B4J1Y8 123 aa6.35□□□□□ -1.39
USP49-204ENST00000423567 TRAV13-2A0A0B4J235 113 aa6.35□□□□□ -1.39
USP49-204ENST00000423567 C6orf99Q4VX62 202 aa6.35□□□□□ -1.39
USP49-204ENST00000423567 Q8NBF4 154 aa6.35□□□□□ -1.39
USP49-204ENST00000423567 ELOF1P60002 83 aaKnown RBP6.34□□□□□ -1.39
USP49-204ENST00000423567 TRBV7-6A0A0J9YX20 115 aa6.33□□□□□ -1.4
USP49-204ENST00000423567 MOBPQ13875 183 aa6.33□□□□□ -1.4
USP49-204ENST00000423567 SLC25A34Q6PIV7 304 aa6.33□□□□□ -1.4
USP49-204ENST00000423567 A0A1B0GWB2 263 aa6.32□□□□□ -1.4
USP49-204ENST00000423567 C9orf153Q5TBE3 101 aa6.32□□□□□ -1.4
USP49-204ENST00000423567 SSBP3-AS1Q7Z2R9 100 aa6.32□□□□□ -1.4
USP49-204ENST00000423567 ST20-AS1Q8NBB2 130 aa6.32□□□□□ -1.4
USP49-204ENST00000423567 RETNLBQ9BQ08 111 aa6.32□□□□□ -1.4
USP49-204ENST00000423567 A4D1N5 150 aa6.31□□□□□ -1.4
USP49-204ENST00000423567 SPINK1P00995 79 aa6.31□□□□□ -1.4
USP49-204ENST00000423567 COX8AP10176 69 aa6.31□□□□□ -1.4
USP49-204ENST00000423567 HIST1H4GQ99525 98 aa6.31□□□□□ -1.4
USP49-204ENST00000423567 CDIP1Q9H305 208 aa6.31□□□□□ -1.4
USP49-204ENST00000423567 NHP2Q9NX24 153 aaKnown RBP6.3□□□□□ -1.4
USP49-204ENST00000423567 LAMTOR3Q9UHA4 124 aa6.3□□□□□ -1.4
USP49-204ENST00000423567 DLEU1O43261 78 aa6.29□□□□□ -1.4
USP49-204ENST00000423567 VAMP3Q15836 100 aa6.29□□□□□ -1.4
USP49-204ENST00000423567 TAL2Q16559 108 aa6.29□□□□□ -1.4
USP49-204ENST00000423567 SPATA45Q537H7 98 aa6.29□□□□□ -1.4
USP49-204ENST00000423567 VAMP8Q9BV40 100 aa6.29□□□□□ -1.4
USP49-204ENST00000423567 PAM16Q9Y3D7 125 aa6.29□□□□□ -1.4
USP49-204ENST00000423567 IGLV7-46A0A075B6I9 117 aa6.28□□□□□ -1.4
USP49-204ENST00000423567 SPRR1BP22528 89 aa6.28□□□□□ -1.4
USP49-204ENST00000423567 SMIM11BQ8TCY0 68 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms