RNA–Protein interactions for RNA: ENST00000422887.1

ECHDC3-203, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-203ENST00000422887 A4D1N5 150 aa6.13□□□□□ -1.43
ECHDC3-203ENST00000422887 TSTD3H0UI37 97 aa6.13□□□□□ -1.43
ECHDC3-203ENST00000422887 SPRR1AP35321 89 aa6.13□□□□□ -1.43
ECHDC3-203ENST00000422887 RPL28P46779 137 aaKnown RBP6.13□□□□□ -1.43
ECHDC3-203ENST00000422887 OR13C6PQ8NH95 151 aa6.13□□□□□ -1.43
ECHDC3-203ENST00000422887 TNXBP22105 4242 aa6.12□□□□□ -1.43
ECHDC3-203ENST00000422887 SPINK6Q6UWN8 80 aa6.12□□□□□ -1.43
ECHDC3-203ENST00000422887 CEND1Q8N111 149 aa6.12□□□□□ -1.43
ECHDC3-203ENST00000422887 ETDCA0A1B0GVM5 59 aa6.11□□□□□ -1.43
ECHDC3-203ENST00000422887 A6NDN8 102 aa6.11□□□□□ -1.43
ECHDC3-203ENST00000422887 H0Y9J4 135 aa6.11□□□□□ -1.43
ECHDC3-203ENST00000422887 ZNF861PO60384 105 aa6.11□□□□□ -1.43
ECHDC3-203ENST00000422887 UBE2AP49459 152 aa6.11□□□□□ -1.43
ECHDC3-203ENST00000422887 HINT1P49773 126 aaPredicted RBP6.11□□□□□ -1.43
ECHDC3-203ENST00000422887 DIRC1Q969H9 104 aa6.11□□□□□ -1.43
ECHDC3-203ENST00000422887 A0A0B4J2C4 111 aa6.1□□□□□ -1.43
ECHDC3-203ENST00000422887 ZNF73O43830 326 aaPredicted RBP6.1□□□□□ -1.43
ECHDC3-203ENST00000422887 FAM19A1Q7Z5A9 133 aa6.1□□□□□ -1.43
ECHDC3-203ENST00000422887 KRTAP13-1Q8IUC0 172 aa6.1□□□□□ -1.43
ECHDC3-203ENST00000422887 PRO1933Q9H354 126 aa6.1□□□□□ -1.43
ECHDC3-203ENST00000422887 KRTAP4-16G5E9R7 235 aaPredicted RBP6.09□□□□□ -1.43
ECHDC3-203ENST00000422887 INAFM2P0DMQ5 153 aa6.09□□□□□ -1.43
ECHDC3-203ENST00000422887 RAB37Q96AX2 223 aa6.09□□□□□ -1.43
ECHDC3-203ENST00000422887 DMBT1Q9UGM3 2413 aaPredicted RBP6.08□□□□□ -1.44
ECHDC3-203ENST00000422887 TRBV7-6A0A0J9YX20 115 aa6.07□□□□□ -1.44
ECHDC3-203ENST00000422887 M0R143 59 aa6.07□□□□□ -1.44
ECHDC3-203ENST00000422887 CFC1BP0CG36 223 aa6.07□□□□□ -1.44
ECHDC3-203ENST00000422887 CFC1P0CG37 223 aa6.07□□□□□ -1.44
ECHDC3-203ENST00000422887 RPL13AP40429 203 aaKnown RBP6.07□□□□□ -1.44
ECHDC3-203ENST00000422887 FXYD2P54710 66 aa6.07□□□□□ -1.44
ECHDC3-203ENST00000422887 PRLHP81277 87 aa6.07□□□□□ -1.44
ECHDC3-203ENST00000422887 Q6ZRX8 168 aa6.07□□□□□ -1.44
ECHDC3-203ENST00000422887 A0A1B0GWB2 263 aa6.06□□□□□ -1.44
ECHDC3-203ENST00000422887 B5MCH6 92 aa6.06□□□□□ -1.44
ECHDC3-203ENST00000422887 C6orf99Q4VX62 202 aa6.06□□□□□ -1.44
ECHDC3-203ENST00000422887 ELOF1P60002 83 aaKnown RBP6.05□□□□□ -1.44
ECHDC3-203ENST00000422887 SMIM11BQ8TCY0 68 aa6.05□□□□□ -1.44
ECHDC3-203ENST00000422887 COX7BP24311 80 aa6.04□□□□□ -1.44
ECHDC3-203ENST00000422887 HIGD2AQ9BW72 106 aa6.04□□□□□ -1.44
ECHDC3-203ENST00000422887 NHP2Q9NX24 153 aaKnown RBP6.04□□□□□ -1.44
ECHDC3-203ENST00000422887 DHRS4-AS1Q9P1J3 65 aa6.04□□□□□ -1.44
ECHDC3-203ENST00000422887 PRO1854Q9UHT4 67 aa6.04□□□□□ -1.44
ECHDC3-203ENST00000422887 ZNF706Q9Y5V0 76 aaPredicted RBP6.04□□□□□ -1.44
ECHDC3-203ENST00000422887 CTAG1AP78358 180 aa6.03□□□□□ -1.44
ECHDC3-203ENST00000422887 VAMP3Q15836 100 aa6.03□□□□□ -1.44
ECHDC3-203ENST00000422887 BVES-AS1Q5T3Y7 98 aa6.03□□□□□ -1.44
ECHDC3-203ENST00000422887 HERC1Q15751 4861 aa6.02□□□□□ -1.45
ECHDC3-203ENST00000422887 OXTP01178 125 aa6.02□□□□□ -1.45
ECHDC3-203ENST00000422887 Q1RN00 199 aa6.02□□□□□ -1.45
ECHDC3-203ENST00000422887 SMCR5Q8TEV8 140 aa6.02□□□□□ -1.45
ECHDC3-203ENST00000422887 Q9BRP9 147 aa6.01□□□□□ -1.45
ECHDC3-203ENST00000422887 KRTAP29-1A8MX34 341 aaPredicted RBP6□□□□□ -1.45
ECHDC3-203ENST00000422887 H7C2G1 150 aa6□□□□□ -1.45
ECHDC3-203ENST00000422887 SLC25A20O43772 301 aa6□□□□□ -1.45
ECHDC3-203ENST00000422887 H0YGX0 51 aa5.99□□□□□ -1.45
ECHDC3-203ENST00000422887 K7ERJ3 54 aa5.99□□□□□ -1.45
ECHDC3-203ENST00000422887 KRTAP1-4P0C5Y4 121 aa5.99□□□□□ -1.45
ECHDC3-203ENST00000422887 FAM229BQ4G0N7 80 aa5.99□□□□□ -1.45
ECHDC3-203ENST00000422887 LINC01600Q96MT4 127 aa5.99□□□□□ -1.45
ECHDC3-203ENST00000422887 SNCGO76070 127 aa5.98□□□□□ -1.45
ECHDC3-203ENST00000422887 SPRR4Q96PI1 79 aa5.98□□□□□ -1.45
ECHDC3-203ENST00000422887 TSPAN13O95857 204 aa5.97□□□□□ -1.45
ECHDC3-203ENST00000422887 COX6CP09669 75 aa5.97□□□□□ -1.45
ECHDC3-203ENST00000422887 LINC00483Q53H64 154 aa5.97□□□□□ -1.45
ECHDC3-203ENST00000422887 LINC00575Q6W349 94 aa5.97□□□□□ -1.45
ECHDC3-203ENST00000422887 A0A1B0GX51 115 aa5.96□□□□□ -1.46
ECHDC3-203ENST00000422887 ERC2-IT1O76042 136 aa5.96□□□□□ -1.46
ECHDC3-203ENST00000422887 PSMB2P49721 201 aa5.96□□□□□ -1.46
ECHDC3-203ENST00000422887 hADV29S1A0JD25 119 aa5.95□□□□□ -1.46
ECHDC3-203ENST00000422887 TRIAP1O43715 76 aa5.95□□□□□ -1.46
ECHDC3-203ENST00000422887 CRYGAP11844 174 aa5.95□□□□□ -1.46
ECHDC3-203ENST00000422887 J3QL48 77 aa5.94□□□□□ -1.46
ECHDC3-203ENST00000422887 SPRR1BP22528 89 aa5.94□□□□□ -1.46
ECHDC3-203ENST00000422887 BATFQ16520 125 aa5.94□□□□□ -1.46
ECHDC3-203ENST00000422887 IGLV5-48A0A075B6I7 105 aa5.93□□□□□ -1.46
ECHDC3-203ENST00000422887 GHRHP01286 108 aa5.93□□□□□ -1.46
ECHDC3-203ENST00000422887 MT1HL1P0DM35 61 aa5.93□□□□□ -1.46
ECHDC3-203ENST00000422887 LYRM7Q5U5X0 104 aa5.93□□□□□ -1.46
ECHDC3-203ENST00000422887 GAGE2AQ6NT46 116 aa5.93□□□□□ -1.46
ECHDC3-203ENST00000422887 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.93□□□□□ -1.46
ECHDC3-203ENST00000422887 A0A087X002 238 aa5.92□□□□□ -1.46
ECHDC3-203ENST00000422887 TEX49A0A1B0GTD5 131 aa5.92□□□□□ -1.46
ECHDC3-203ENST00000422887 OCIAD2Q56VL3 154 aa5.92□□□□□ -1.46
ECHDC3-203ENST00000422887 PRR26Q8N8Z3 221 aa5.92□□□□□ -1.46
ECHDC3-203ENST00000422887 ST20-AS1Q8NBB2 130 aa5.92□□□□□ -1.46
ECHDC3-203ENST00000422887 PPDPFLQ8WWR9 84 aa5.92□□□□□ -1.46
ECHDC3-203ENST00000422887 KRTAP10-8P60410 259 aa5.91□□□□□ -1.46
ECHDC3-203ENST00000422887 Q6ZQY7 126 aa5.91□□□□□ -1.46
ECHDC3-203ENST00000422887 DNAL4O96015 105 aa5.9□□□□□ -1.46
ECHDC3-203ENST00000422887 SCGB1C2P0DMR2 95 aa5.9□□□□□ -1.46
ECHDC3-203ENST00000422887 TYMSOSQ8TAI1 123 aa5.9□□□□□ -1.46
ECHDC3-203ENST00000422887 LAMTOR3Q9UHA4 124 aa5.9□□□□□ -1.46
ECHDC3-203ENST00000422887 H3BQ85 93 aa5.89□□□□□ -1.47
ECHDC3-203ENST00000422887 LINC01547P58512 204 aaPredicted RBP5.89□□□□□ -1.47
ECHDC3-203ENST00000422887 FAM218AQ96MZ4 157 aa5.89□□□□□ -1.47
ECHDC3-203ENST00000422887 SNHG12Q9BXW3 62 aa5.89□□□□□ -1.47
ECHDC3-203ENST00000422887 ANAPC11Q9NYG5 84 aa5.89□□□□□ -1.47
ECHDC3-203ENST00000422887 TRACP01848 142 aa5.88□□□□□ -1.47
ECHDC3-203ENST00000422887 KRTAP13-2Q52LG2 175 aa5.88□□□□□ -1.47
ECHDC3-203ENST00000422887 Q8NBF4 154 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms