RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 DEFB105AQ8NG35 78 aa10.33□□□□□ -0.76
CDH1-202ENST00000422392 LYSTQ99698 3801 aa10.32□□□□□ -0.76
CDH1-202ENST00000422392 NBEAL1Q6ZS30 2694 aa10.32□□□□□ -0.76
CDH1-202ENST00000422392 CXCL6P80162 114 aa10.32□□□□□ -0.76
CDH1-202ENST00000422392 DNAH3Q8TD57 4116 aa10.32□□□□□ -0.76
CDH1-202ENST00000422392 C11orf45Q8TAV5 145 aa10.31□□□□□ -0.76
CDH1-202ENST00000422392 Q8N9L7 120 aa10.31□□□□□ -0.76
CDH1-202ENST00000422392 NKAPP1Q8N9T2 125 aa10.3□□□□□ -0.76
CDH1-202ENST00000422392 C7orf33Q8WU49 177 aa10.3□□□□□ -0.76
CDH1-202ENST00000422392 FAM168BA1KXE4 195 aa10.29□□□□□ -0.76
CDH1-202ENST00000422392 RPL37AP8A6NKH3 93 aa10.29□□□□□ -0.76
CDH1-202ENST00000422392 CASC10Q5T4H9 136 aa10.29□□□□□ -0.76
CDH1-202ENST00000422392 SNURFQ9Y675 71 aa10.29□□□□□ -0.76
CDH1-202ENST00000422392 TRAV7A0A075B6U4 112 aa10.29□□□□□ -0.76
CDH1-202ENST00000422392 RPS28P62857 69 aaKnown RBP10.29□□□□□ -0.76
CDH1-202ENST00000422392 COL6A5A8TX70 2615 aa10.29□□□□□ -0.76
CDH1-202ENST00000422392 C3orf84H3BNL1 204 aa10.28□□□□□ -0.76
CDH1-202ENST00000422392 TM2D3Q9BRN9 247 aa10.27□□□□□ -0.77
CDH1-202ENST00000422392 DNAH1Q9P2D7 4330 aa10.27□□□□□ -0.77
CDH1-202ENST00000422392 KCNQ1DNQ9H478 68 aa10.26□□□□□ -0.77
CDH1-202ENST00000422392 PRB2P02812 416 aaPredicted RBP10.26□□□□□ -0.77
CDH1-202ENST00000422392 KRTAP24-1Q3LI83 254 aa10.26□□□□□ -0.77
CDH1-202ENST00000422392 Q8N377 158 aa10.25□□□□□ -0.77
CDH1-202ENST00000422392 DNAH10Q8IVF4 4471 aa10.25□□□□□ -0.77
CDH1-202ENST00000422392 RMI2Q96E14 147 aa10.25□□□□□ -0.77
CDH1-202ENST00000422392 H7BZZ5 65 aa10.24□□□□□ -0.77
CDH1-202ENST00000422392 DNAH10OSP0CZ25 163 aa10.23□□□□□ -0.77
CDH1-202ENST00000422392 BPY2O14599 106 aa10.22□□□□□ -0.77
CDH1-202ENST00000422392 LINC00588Q9Y4M8 146 aa10.22□□□□□ -0.77
CDH1-202ENST00000422392 Q9BRP9 147 aa10.22□□□□□ -0.77
CDH1-202ENST00000422392 BCE1O60756 84 aa10.21□□□□□ -0.78
CDH1-202ENST00000422392 NREPQ16612 68 aa10.21□□□□□ -0.78
CDH1-202ENST00000422392 KRTAP7-1Q8IUC3 87 aa10.21□□□□□ -0.78
CDH1-202ENST00000422392 FAM236DA0A1B0GTK5 79 aa10.2□□□□□ -0.78
CDH1-202ENST00000422392 FAM236CP0DP71 79 aa10.2□□□□□ -0.78
CDH1-202ENST00000422392 ST20-AS1Q8NBB2 130 aa10.2□□□□□ -0.78
CDH1-202ENST00000422392 CSMD3Q7Z407 3707 aa10.2□□□□□ -0.78
CDH1-202ENST00000422392 HUWE1Q7Z6Z7 4374 aaKnown RBP10.19□□□□□ -0.78
CDH1-202ENST00000422392 IGKV4-1P06312 121 aa10.19□□□□□ -0.78
CDH1-202ENST00000422392 KLKP1Q107X0 134 aa10.19□□□□□ -0.78
CDH1-202ENST00000422392 Q6ZRX8 168 aa10.19□□□□□ -0.78
CDH1-202ENST00000422392 F8WDY8 70 aa10.19□□□□□ -0.78
CDH1-202ENST00000422392 MRAPQ8TCY5 172 aa10.18□□□□□ -0.78
CDH1-202ENST00000422392 F8WEM9 126 aa10.18□□□□□ -0.78
CDH1-202ENST00000422392 COL7A1Q02388 2944 aa10.17□□□□□ -0.78
CDH1-202ENST00000422392 IGLV1-50A0A075B6I6 118 aa10.17□□□□□ -0.78
CDH1-202ENST00000422392 KRTAP4-16G5E9R7 235 aaPredicted RBP10.17□□□□□ -0.78
CDH1-202ENST00000422392 TLX1NBP0CAT3 122 aa10.17□□□□□ -0.78
CDH1-202ENST00000422392 ETDCA0A1B0GVM5 59 aa10.16□□□□□ -0.78
CDH1-202ENST00000422392 IGLV5-48A0A075B6I7 105 aa10.16□□□□□ -0.78
CDH1-202ENST00000422392 ERC2-IT1O76042 136 aa10.16□□□□□ -0.78
CDH1-202ENST00000422392 SRRM2Q9UQ35 2752 aaKnown RBP10.15□□□□□ -0.78
CDH1-202ENST00000422392 C4orf26Q17RF5 130 aa10.15□□□□□ -0.78
CDH1-202ENST00000422392 A0A1W2PNM2 257 aa10.14□□□□□ -0.79
CDH1-202ENST00000422392 DNAH9Q9NYC9 4486 aa10.14□□□□□ -0.79
CDH1-202ENST00000422392 DHRS4-AS1Q9P1J3 65 aa10.14□□□□□ -0.79
CDH1-202ENST00000422392 Q5XG85 94 aa10.13□□□□□ -0.79
CDH1-202ENST00000422392 TENM2Q9NT68 2774 aa10.13□□□□□ -0.79
CDH1-202ENST00000422392 PLA2G2DQ9UNK4 145 aa10.13□□□□□ -0.79
CDH1-202ENST00000422392 PRYO14603 147 aa10.12□□□□□ -0.79
CDH1-202ENST00000422392 SPRR1AP35321 89 aa10.12□□□□□ -0.79
CDH1-202ENST00000422392 C1orf137Q5JT78 98 aa10.12□□□□□ -0.79
CDH1-202ENST00000422392 MRPL55Q7Z7F7 128 aaKnown RBP10.12□□□□□ -0.79
CDH1-202ENST00000422392 UBE2BP63146 152 aa10.11□□□□□ -0.79
CDH1-202ENST00000422392 STAB2Q8WWQ8 2551 aa10.11□□□□□ -0.79
CDH1-202ENST00000422392 FUSP35637 526 aaKnown RBP eCLIP10.1□□□□□ -0.79
CDH1-202ENST00000422392 TMEM254Q8TBM7 123 aa10.1□□□□□ -0.79
CDH1-202ENST00000422392 IGLV5-37A0A075B6J1 123 aa10.1□□□□□ -0.79
CDH1-202ENST00000422392 A0A0G2JQZ4 141 aa10.1□□□□□ -0.79
CDH1-202ENST00000422392 A0A1W2PNN7 141 aa10.1□□□□□ -0.79
CDH1-202ENST00000422392 TNP2Q05952 138 aa10.1□□□□□ -0.79
CDH1-202ENST00000422392 MGAM2Q2M2H8 2515 aa10.09□□□□□ -0.79
CDH1-202ENST00000422392 HRCT1Q6UXD1 115 aa10.08□□□□□ -0.8
CDH1-202ENST00000422392 OCR1Q9BZK8 76 aa10.08□□□□□ -0.8
CDH1-202ENST00000422392 DNAH7Q8WXX0 4024 aa10.07□□□□□ -0.8
CDH1-202ENST00000422392 SERP1Q9Y6X1 66 aa10.06□□□□□ -0.8
CDH1-202ENST00000422392 IGKV2-24A0A0C4DH68 120 aa10.05□□□□□ -0.8
CDH1-202ENST00000422392 C5orf47Q569G3 176 aa10.05□□□□□ -0.8
CDH1-202ENST00000422392 SMIM29Q86T20 159 aa10.05□□□□□ -0.8
CDH1-202ENST00000422392 Q8NBF4 154 aa10.05□□□□□ -0.8
CDH1-202ENST00000422392 REG3GQ6UW15 175 aa10.04□□□□□ -0.8
CDH1-202ENST00000422392 FAM30AQ9NZY2 134 aa10.04□□□□□ -0.8
CDH1-202ENST00000422392 EPM2AB3EWF7 344 aa10.03□□□□□ -0.8
CDH1-202ENST00000422392 KRTAP1-5Q9BYS1 174 aa10.03□□□□□ -0.8
CDH1-202ENST00000422392 K7EIL1 84 aa10.03□□□□□ -0.8
CDH1-202ENST00000422392 HIGD2AQ9BW72 106 aa10.02□□□□□ -0.81
CDH1-202ENST00000422392 A0A096LNI7 61 aa10.02□□□□□ -0.81
CDH1-202ENST00000422392 PRLHP81277 87 aa10.02□□□□□ -0.81
CDH1-202ENST00000422392 SPRR4Q96PI1 79 aa10.01□□□□□ -0.81
CDH1-202ENST00000422392 NDUFC1O43677 76 aa10□□□□□ -0.81
CDH1-202ENST00000422392 K7EQZ3 153 aa10□□□□□ -0.81
CDH1-202ENST00000422392 DSCR10P59022 87 aa10□□□□□ -0.81
CDH1-202ENST00000422392 LINC00476Q8WZB0 136 aa10□□□□□ -0.81
CDH1-202ENST00000422392 A0A0U1RQV1 116 aa9.99□□□□□ -0.81
CDH1-202ENST00000422392 DEFB116Q30KQ4 102 aa9.99□□□□□ -0.81
CDH1-202ENST00000422392 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.98□□□□□ -0.81
CDH1-202ENST00000422392 FP248Q71RG6 208 aaPredicted RBP9.96□□□□□ -0.81
CDH1-202ENST00000422392 LINC00474Q9P2X8 69 aa9.96□□□□□ -0.81
CDH1-202ENST00000422392 A0A1B0GW54 56 aa9.96□□□□□ -0.82
CDH1-202ENST00000422392 IGFL1Q6UW32 110 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms