RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 LITAFQ99732 161 aa12.76□□□□□ -0.37
TRAF4-204ENST00000422344 TTTY13Q9BZ97 58 aa12.75□□□□□ -0.37
TRAF4-204ENST00000422344 SPANXCQ9NY87 97 aa12.75□□□□□ -0.37
TRAF4-204ENST00000422344 CBY1Q9Y3M2 126 aa12.75□□□□□ -0.37
TRAF4-204ENST00000422344 AKR1D1P51857 326 aa12.74□□□□□ -0.37
TRAF4-204ENST00000422344 Q6ZRX8 168 aa12.74□□□□□ -0.37
TRAF4-204ENST00000422344 PPDPFQ9H3Y8 114 aa12.74□□□□□ -0.37
TRAF4-204ENST00000422344 SCGB1D4Q6XE38 83 aa12.73□□□□□ -0.37
TRAF4-204ENST00000422344 JOSD1Q15040 202 aaPredicted RBP12.72□□□□□ -0.37
TRAF4-204ENST00000422344 ATOH7Q8N100 152 aa12.72□□□□□ -0.37
TRAF4-204ENST00000422344 OR13C6PQ8NH95 151 aa12.72□□□□□ -0.37
TRAF4-204ENST00000422344 ZNF73O43830 326 aaPredicted RBP12.71□□□□□ -0.37
TRAF4-204ENST00000422344 GAGE2AQ6NT46 116 aa12.71□□□□□ -0.37
TRAF4-204ENST00000422344 HINT1P49773 126 aaPredicted RBP12.7□□□□□ -0.38
TRAF4-204ENST00000422344 S100A2P29034 98 aa12.69□□□□□ -0.38
TRAF4-204ENST00000422344 CTAG1AP78358 180 aa12.69□□□□□ -0.38
TRAF4-204ENST00000422344 ANKRD39Q53RE8 183 aa12.69□□□□□ -0.38
TRAF4-204ENST00000422344 Q9BRP9 147 aa12.69□□□□□ -0.38
TRAF4-204ENST00000422344 ERC2-IT1O76042 136 aa12.68□□□□□ -0.38
TRAF4-204ENST00000422344 LINC00483Q53H64 154 aa12.68□□□□□ -0.38
TRAF4-204ENST00000422344 C4orf48Q5BLP8 95 aa12.68□□□□□ -0.38
TRAF4-204ENST00000422344 SPAG11AQ6PDA7 123 aa12.68□□□□□ -0.38
TRAF4-204ENST00000422344 RETNLBQ9BQ08 111 aa12.67□□□□□ -0.38
TRAF4-204ENST00000422344 COPS9Q8WXC6 57 aa12.66□□□□□ -0.38
TRAF4-204ENST00000422344 SPANXDQ9BXN6 97 aa12.66□□□□□ -0.38
TRAF4-204ENST00000422344 LINC00518Q8N0U6 118 aa12.65□□□□□ -0.38
TRAF4-204ENST00000422344 HIST3H2BBQ8N257 126 aa12.64□□□□□ -0.39
TRAF4-204ENST00000422344 Q8NBF4 154 aa12.64□□□□□ -0.39
TRAF4-204ENST00000422344 S100A6P06703 90 aa12.63□□□□□ -0.39
TRAF4-204ENST00000422344 SNRPEP62304 92 aaKnown RBP12.63□□□□□ -0.39
TRAF4-204ENST00000422344 HIST1H2BLQ99880 126 aa12.62□□□□□ -0.39
TRAF4-204ENST00000422344 IGLV9-49A0A0B4J1Y8 123 aa12.61□□□□□ -0.39
TRAF4-204ENST00000422344 A0A0U1RQV1 116 aa12.61□□□□□ -0.39
TRAF4-204ENST00000422344 PCP2Q8IVA1 136 aa12.61□□□□□ -0.39
TRAF4-204ENST00000422344 KRTAP9-2Q9BYQ4 174 aa12.61□□□□□ -0.39
TRAF4-204ENST00000422344 IFITM1P13164 125 aa12.6□□□□□ -0.39
TRAF4-204ENST00000422344 MOBPQ13875 183 aa12.59□□□□□ -0.39
TRAF4-204ENST00000422344 Q6ZVH6 145 aa12.59□□□□□ -0.39
TRAF4-204ENST00000422344 HSBP1L1C9JCN9 74 aa12.57□□□□□ -0.4
TRAF4-204ENST00000422344 C5orf52A6NGY3 159 aa12.56□□□□□ -0.4
TRAF4-204ENST00000422344 DHRS4-AS1Q9P1J3 65 aa12.56□□□□□ -0.4
TRAF4-204ENST00000422344 IGLV7-46A0A075B6I9 117 aa12.55□□□□□ -0.4
TRAF4-204ENST00000422344 SPINK1P00995 79 aa12.55□□□□□ -0.4
TRAF4-204ENST00000422344 SSBP3-AS1Q7Z2R9 100 aa12.55□□□□□ -0.4
TRAF4-204ENST00000422344 ST20-AS1Q8NBB2 130 aa12.55□□□□□ -0.4
TRAF4-204ENST00000422344 COX7BP24311 80 aa12.54□□□□□ -0.4
TRAF4-204ENST00000422344 C6orf99Q4VX62 202 aa12.54□□□□□ -0.4
TRAF4-204ENST00000422344 C9orf153Q5TBE3 101 aa12.54□□□□□ -0.4
TRAF4-204ENST00000422344 MUSTN1Q8IVN3 82 aa12.54□□□□□ -0.4
TRAF4-204ENST00000422344 A6NDN8 102 aa12.53□□□□□ -0.4
TRAF4-204ENST00000422344 ELOF1P60002 83 aaKnown RBP12.52□□□□□ -0.41
TRAF4-204ENST00000422344 TPRXLQ17RH7 258 aa12.49□□□□□ -0.41
TRAF4-204ENST00000422344 SLC25A34Q6PIV7 304 aa12.49□□□□□ -0.41
TRAF4-204ENST00000422344 CDIP1Q9H305 208 aa12.49□□□□□ -0.41
TRAF4-204ENST00000422344 FP248Q71RG6 208 aaPredicted RBP12.48□□□□□ -0.41
TRAF4-204ENST00000422344 FAT4Q6V0I7 4981 aa12.47□□□□□ -0.41
TRAF4-204ENST00000422344 TRBV7-6A0A0J9YX20 115 aa12.47□□□□□ -0.41
TRAF4-204ENST00000422344 SCGB1D1O95968 90 aa12.47□□□□□ -0.41
TRAF4-204ENST00000422344 TRAV13-2A0A0B4J235 113 aa12.46□□□□□ -0.41
TRAF4-204ENST00000422344 A0A1B0GWB2 263 aa12.45□□□□□ -0.42
TRAF4-204ENST00000422344 SPRR1BP22528 89 aa12.45□□□□□ -0.42
TRAF4-204ENST00000422344 RPS29P62273 56 aaKnown RBP12.45□□□□□ -0.42
TRAF4-204ENST00000422344 LCE2AQ5TA79 106 aaPredicted RBP12.44□□□□□ -0.42
TRAF4-204ENST00000422344 LAMTOR3Q9UHA4 124 aa12.44□□□□□ -0.42
TRAF4-204ENST00000422344 TAL2Q16559 108 aa12.43□□□□□ -0.42
TRAF4-204ENST00000422344 DEFB105AQ8NG35 78 aa12.42□□□□□ -0.42
TRAF4-204ENST00000422344 A4D1N5 150 aa12.39□□□□□ -0.43
TRAF4-204ENST00000422344 SLC25A20O43772 301 aa12.39□□□□□ -0.43
TRAF4-204ENST00000422344 TEX49A0A1B0GTD5 131 aa12.38□□□□□ -0.43
TRAF4-204ENST00000422344 Q8N377 158 aa12.38□□□□□ -0.43
TRAF4-204ENST00000422344 SMIM11BQ8TCY0 68 aa12.38□□□□□ -0.43
TRAF4-204ENST00000422344 NHP2Q9NX24 153 aaKnown RBP12.37□□□□□ -0.43
TRAF4-204ENST00000422344 Q1RN00 199 aa12.36□□□□□ -0.43
TRAF4-204ENST00000422344 VAMP3Q15836 100 aa12.34□□□□□ -0.43
TRAF4-204ENST00000422344 KRTAP9-6A0A140TA67 174 aa12.33□□□□□ -0.44
TRAF4-204ENST00000422344 COX8AP10176 69 aa12.33□□□□□ -0.44
TRAF4-204ENST00000422344 HIST1H4GQ99525 98 aa12.33□□□□□ -0.44
TRAF4-204ENST00000422344 KRTAP13-3Q3SY46 172 aa12.31□□□□□ -0.44
TRAF4-204ENST00000422344 HRCT1Q6UXD1 115 aa12.31□□□□□ -0.44
TRAF4-204ENST00000422344 LIMD2Q9BT23 127 aa12.31□□□□□ -0.44
TRAF4-204ENST00000422344 PRO1933Q9H354 126 aa12.3□□□□□ -0.44
TRAF4-204ENST00000422344 MUC17Q685J3 4493 aa12.3□□□□□ -0.44
TRAF4-204ENST00000422344 IGLV5-48A0A075B6I7 105 aa12.29□□□□□ -0.44
TRAF4-204ENST00000422344 DLEU1O43261 78 aa12.28□□□□□ -0.44
TRAF4-204ENST00000422344 C12orf57Q99622 126 aa12.27□□□□□ -0.45
TRAF4-204ENST00000422344 LINC01547P58512 204 aaPredicted RBP12.26□□□□□ -0.45
TRAF4-204ENST00000422344 PAM16Q9Y3D7 125 aa12.26□□□□□ -0.45
TRAF4-204ENST00000422344 SPATA45Q537H7 98 aa12.25□□□□□ -0.45
TRAF4-204ENST00000422344 SMIM29Q86T20 159 aa12.25□□□□□ -0.45
TRAF4-204ENST00000422344 C14orf144Q96I85 54 aa12.25□□□□□ -0.45
TRAF4-204ENST00000422344 CD164Q04900 197 aa12.24□□□□□ -0.45
TRAF4-204ENST00000422344 VAMP8Q9BV40 100 aa12.24□□□□□ -0.45
TRAF4-204ENST00000422344 H7C2G1 150 aa12.23□□□□□ -0.45
TRAF4-204ENST00000422344 LINC00575Q6W349 94 aa12.23□□□□□ -0.45
TRAF4-204ENST00000422344 hADV29S1A0JD25 119 aa12.21□□□□□ -0.45
TRAF4-204ENST00000422344 F8WEM9 126 aa12.2□□□□□ -0.46
TRAF4-204ENST00000422344 BVES-AS1Q5T3Y7 98 aa12.19□□□□□ -0.46
TRAF4-204ENST00000422344 Q6ZQY7 126 aa12.18□□□□□ -0.46
TRAF4-204ENST00000422344 HIGD1BQ9P298 99 aa12.18□□□□□ -0.46
TRAF4-204ENST00000422344 RAB37Q96AX2 223 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms