RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 HIST1H2BNQ99877 126 aa14.56□□□□□ -0.08
SMDT1-202ENST00000422252 HIST1H2BMQ99879 126 aa14.56□□□□□ -0.08
SMDT1-202ENST00000422252 Q9BRP9 147 aa14.56□□□□□ -0.08
SMDT1-202ENST00000422252 TRAV23DV6A0A075B6W5 121 aa14.53□□□□□ -0.08
SMDT1-202ENST00000422252 EIF4EBP3O60516 100 aaPredicted RBP14.53□□□□□ -0.08
SMDT1-202ENST00000422252 FP248Q71RG6 208 aaPredicted RBP14.52□□□□□ -0.09
SMDT1-202ENST00000422252 SPINK1P00995 79 aa14.51□□□□□ -0.09
SMDT1-202ENST00000422252 JOSD1Q15040 202 aaPredicted RBP14.5□□□□□ -0.09
SMDT1-202ENST00000422252 IGLV9-49A0A0B4J1Y8 123 aa14.49□□□□□ -0.09
SMDT1-202ENST00000422252 MOBPQ13875 183 aa14.49□□□□□ -0.09
SMDT1-202ENST00000422252 LINC01545Q5VT33 79 aa14.49□□□□□ -0.09
SMDT1-202ENST00000422252 MUC17Q685J3 4493 aa14.48□□□□□ -0.09
SMDT1-202ENST00000422252 ZNF73O43830 326 aaPredicted RBP14.48□□□□□ -0.09
SMDT1-202ENST00000422252 PET117Q6UWS5 81 aa14.47□□□□□ -0.09
SMDT1-202ENST00000422252 SSBP3-AS1Q7Z2R9 100 aa14.47□□□□□ -0.09
SMDT1-202ENST00000422252 LITAFQ99732 161 aa14.46□□□□□ -0.09
SMDT1-202ENST00000422252 CBY1Q9Y3M2 126 aa14.45□□□□□ -0.1
SMDT1-202ENST00000422252 TIMM17BO60830 172 aa14.44□□□□□ -0.1
SMDT1-202ENST00000422252 LINC00308Q8TCZ7 52 aa14.44□□□□□ -0.1
SMDT1-202ENST00000422252 SPANXCQ9NY87 97 aa14.44□□□□□ -0.1
SMDT1-202ENST00000422252 ZNF815PA8K554 130 aa14.41□□□□□ -0.1
SMDT1-202ENST00000422252 HINT1P49773 126 aaPredicted RBP14.41□□□□□ -0.1
SMDT1-202ENST00000422252 RPS29P62273 56 aaKnown RBP14.41□□□□□ -0.1
SMDT1-202ENST00000422252 C3orf79P0CE67 100 aa14.39□□□□□ -0.11
SMDT1-202ENST00000422252 OR13C6PQ8NH95 151 aa14.39□□□□□ -0.11
SMDT1-202ENST00000422252 KRTAP13-3Q3SY46 172 aa14.38□□□□□ -0.11
SMDT1-202ENST00000422252 C5orf52A6NGY3 159 aa14.37□□□□□ -0.11
SMDT1-202ENST00000422252 ST20-AS1Q8NBB2 130 aa14.37□□□□□ -0.11
SMDT1-202ENST00000422252 TTTY13Q9BZ97 58 aa14.37□□□□□ -0.11
SMDT1-202ENST00000422252 C9orf153Q5TBE3 101 aa14.36□□□□□ -0.11
SMDT1-202ENST00000422252 Q8N377 158 aa14.36□□□□□ -0.11
SMDT1-202ENST00000422252 COA6Q5JTJ3 125 aaKnown RBP14.35□□□□□ -0.11
SMDT1-202ENST00000422252 SPANXDQ9BXN6 97 aa14.35□□□□□ -0.11
SMDT1-202ENST00000422252 KRTDAPP60985 99 aa14.34□□□□□ -0.11
SMDT1-202ENST00000422252 FAT4Q6V0I7 4981 aa14.32□□□□□ -0.12
SMDT1-202ENST00000422252 SLC25A20O43772 301 aa14.31□□□□□ -0.12
SMDT1-202ENST00000422252 LINC00518Q8N0U6 118 aa14.31□□□□□ -0.12
SMDT1-202ENST00000422252 DHRS4-AS1Q9P1J3 65 aa14.31□□□□□ -0.12
SMDT1-202ENST00000422252 C20orf202A1L168 122 aa14.27□□□□□ -0.13
SMDT1-202ENST00000422252 SPRR1BP22528 89 aa14.27□□□□□ -0.13
SMDT1-202ENST00000422252 LCE2AQ5TA79 106 aaPredicted RBP14.27□□□□□ -0.13
SMDT1-202ENST00000422252 SCGB1D4Q6XE38 83 aa14.27□□□□□ -0.13
SMDT1-202ENST00000422252 COX7BP24311 80 aa14.25□□□□□ -0.13
SMDT1-202ENST00000422252 ELOF1P60002 83 aaKnown RBP14.25□□□□□ -0.13
SMDT1-202ENST00000422252 SLC25A34Q6PIV7 304 aa14.25□□□□□ -0.13
SMDT1-202ENST00000422252 ASB16-AS1Q495Z4 193 aa14.24□□□□□ -0.13
SMDT1-202ENST00000422252 C6orf99Q4VX62 202 aa14.24□□□□□ -0.13
SMDT1-202ENST00000422252 ANKRD39Q53RE8 183 aa14.24□□□□□ -0.13
SMDT1-202ENST00000422252 COPS9Q8WXC6 57 aa14.22□□□□□ -0.13
SMDT1-202ENST00000422252 IFITM1P13164 125 aa14.2□□□□□ -0.14
SMDT1-202ENST00000422252 ATOH7Q8N100 152 aa14.2□□□□□ -0.14
SMDT1-202ENST00000422252 LAMTOR3Q9UHA4 124 aa14.2□□□□□ -0.14
SMDT1-202ENST00000422252 Q6ZVH6 145 aa14.18□□□□□ -0.14
SMDT1-202ENST00000422252 TRBV7-6A0A0J9YX20 115 aa14.17□□□□□ -0.14
SMDT1-202ENST00000422252 AKR1D1P51857 326 aa14.17□□□□□ -0.14
SMDT1-202ENST00000422252 SEC61BP60468 96 aaKnown RBP14.17□□□□□ -0.14
SMDT1-202ENST00000422252 TAL2Q16559 108 aa14.15□□□□□ -0.14
SMDT1-202ENST00000422252 PCP2Q8IVA1 136 aa14.15□□□□□ -0.14
SMDT1-202ENST00000422252 LIMD2Q9BT23 127 aa14.15□□□□□ -0.14
SMDT1-202ENST00000422252 HRCT1Q6UXD1 115 aa14.14□□□□□ -0.15
SMDT1-202ENST00000422252 MUSTN1Q8IVN3 82 aa14.14□□□□□ -0.15
SMDT1-202ENST00000422252 DEFB105AQ8NG35 78 aa14.14□□□□□ -0.15
SMDT1-202ENST00000422252 A6NDN8 102 aa14.13□□□□□ -0.15
SMDT1-202ENST00000422252 A0A1B0GWB2 263 aa14.12□□□□□ -0.15
SMDT1-202ENST00000422252 TEX49A0A1B0GTD5 131 aa14.11□□□□□ -0.15
SMDT1-202ENST00000422252 Q1RN00 199 aa14.11□□□□□ -0.15
SMDT1-202ENST00000422252 XP32Q5T750 250 aa14.11□□□□□ -0.15
SMDT1-202ENST00000422252 SNRPEP62304 92 aaKnown RBP14.09□□□□□ -0.15
SMDT1-202ENST00000422252 KRTAP4-1Q9BYQ7 146 aa14.08□□□□□ -0.16
SMDT1-202ENST00000422252 PRO1933Q9H354 126 aa14.07□□□□□ -0.16
SMDT1-202ENST00000422252 CD164Q04900 197 aa14.06□□□□□ -0.16
SMDT1-202ENST00000422252 TRAV13-2A0A0B4J235 113 aa14.05□□□□□ -0.16
SMDT1-202ENST00000422252 A4D1N5 150 aa14.04□□□□□ -0.16
SMDT1-202ENST00000422252 LINC01547P58512 204 aaPredicted RBP14.04□□□□□ -0.16
SMDT1-202ENST00000422252 SMIM29Q86T20 159 aa14.04□□□□□ -0.16
SMDT1-202ENST00000422252 IGLV5-48A0A075B6I7 105 aa14.03□□□□□ -0.16
SMDT1-202ENST00000422252 KRTAP9-2Q9BYQ4 174 aa14.03□□□□□ -0.16
SMDT1-202ENST00000422252 HIST3H2BBQ8N257 126 aa14.02□□□□□ -0.17
SMDT1-202ENST00000422252 SMIM11BQ8TCY0 68 aa14.01□□□□□ -0.17
SMDT1-202ENST00000422252 H7C2G1 150 aa14□□□□□ -0.17
SMDT1-202ENST00000422252 HIST1H2BLQ99880 126 aa14□□□□□ -0.17
SMDT1-202ENST00000422252 NHP2Q9NX24 153 aaKnown RBP14□□□□□ -0.17
SMDT1-202ENST00000422252 S100A2P29034 98 aa13.99□□□□□ -0.17
SMDT1-202ENST00000422252 HSBP1L1C9JCN9 74 aa13.96□□□□□ -0.17
SMDT1-202ENST00000422252 Q5XG85 94 aa13.95□□□□□ -0.18
SMDT1-202ENST00000422252 C9orf92A6NGG3 77 aa13.94□□□□□ -0.18
SMDT1-202ENST00000422252 A0A0G2JQZ4 141 aa13.91□□□□□ -0.18
SMDT1-202ENST00000422252 VAMP3Q15836 100 aa13.91□□□□□ -0.18
SMDT1-202ENST00000422252 S100A6P06703 90 aa13.88□□□□□ -0.19
SMDT1-202ENST00000422252 C1orf195Q5TG92 126 aa13.87□□□□□ -0.19
SMDT1-202ENST00000422252 LINC00575Q6W349 94 aa13.87□□□□□ -0.19
SMDT1-202ENST00000422252 S100A1P23297 94 aa13.86□□□□□ -0.19
SMDT1-202ENST00000422252 PCOTHQ58A44 107 aa13.85□□□□□ -0.19
SMDT1-202ENST00000422252 F8WEM9 126 aa13.83□□□□□ -0.2
SMDT1-202ENST00000422252 hADV29S1A0JD25 119 aa13.82□□□□□ -0.2
SMDT1-202ENST00000422252 Q6ZQY7 126 aa13.81□□□□□ -0.2
SMDT1-202ENST00000422252 IGLV8-61A0A075B6I0 122 aa13.79□□□□□ -0.2
SMDT1-202ENST00000422252 SCGB1D1O95968 90 aa13.79□□□□□ -0.2
SMDT1-202ENST00000422252 TCL1BO95988 128 aa13.79□□□□□ -0.2
SMDT1-202ENST00000422252 HIST1H4GQ99525 98 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms