RNA–Protein interactions for RNA: ENST00000422080.5

HDLBP-208, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-208ENST00000422080 HIST1H2BHQ93079 126 aa10.13□□□□□ -0.79
HDLBP-208ENST00000422080 HIST1H2BNQ99877 126 aa10.13□□□□□ -0.79
HDLBP-208ENST00000422080 HIST1H2BMQ99879 126 aa10.13□□□□□ -0.79
HDLBP-208ENST00000422080 Q9BRP9 147 aa10.13□□□□□ -0.79
HDLBP-208ENST00000422080 MUC17Q685J3 4493 aa10.12□□□□□ -0.79
HDLBP-208ENST00000422080 TRAV23DV6A0A075B6W5 121 aa10.11□□□□□ -0.79
HDLBP-208ENST00000422080 EIF4EBP3O60516 100 aaPredicted RBP10.11□□□□□ -0.79
HDLBP-208ENST00000422080 JOSD1Q15040 202 aaPredicted RBP10.11□□□□□ -0.79
HDLBP-208ENST00000422080 SSBP3-AS1Q7Z2R9 100 aa10.11□□□□□ -0.79
HDLBP-208ENST00000422080 LINC01545Q5VT33 79 aa10.1□□□□□ -0.79
HDLBP-208ENST00000422080 PET117Q6UWS5 81 aa10.1□□□□□ -0.79
HDLBP-208ENST00000422080 CBY1Q9Y3M2 126 aa10.1□□□□□ -0.79
HDLBP-208ENST00000422080 ZNF73O43830 326 aaPredicted RBP10.09□□□□□ -0.79
HDLBP-208ENST00000422080 NPC2P61916 151 aa10.09□□□□□ -0.79
HDLBP-208ENST00000422080 TIMM17BO60830 172 aa10.08□□□□□ -0.8
HDLBP-208ENST00000422080 LITAFQ99732 161 aa10.08□□□□□ -0.8
HDLBP-208ENST00000422080 IGLV9-49A0A0B4J1Y8 123 aa10.07□□□□□ -0.8
HDLBP-208ENST00000422080 MOBPQ13875 183 aa10.07□□□□□ -0.8
HDLBP-208ENST00000422080 RPS29P62273 56 aaKnown RBP10.06□□□□□ -0.8
HDLBP-208ENST00000422080 LINC00308Q8TCZ7 52 aa10.06□□□□□ -0.8
HDLBP-208ENST00000422080 SPANXCQ9NY87 97 aa10.06□□□□□ -0.8
HDLBP-208ENST00000422080 C5orf52A6NGY3 159 aa10.05□□□□□ -0.8
HDLBP-208ENST00000422080 HINT1P49773 126 aaPredicted RBP10.05□□□□□ -0.8
HDLBP-208ENST00000422080 ZNF815PA8K554 130 aa10.03□□□□□ -0.8
HDLBP-208ENST00000422080 C3orf79P0CE67 100 aa10.03□□□□□ -0.8
HDLBP-208ENST00000422080 COA6Q5JTJ3 125 aaKnown RBP10.03□□□□□ -0.8
HDLBP-208ENST00000422080 KRTAP13-3Q3SY46 172 aa10.01□□□□□ -0.81
HDLBP-208ENST00000422080 OR13C6PQ8NH95 151 aa10.01□□□□□ -0.81
HDLBP-208ENST00000422080 LINC00518Q8N0U6 118 aa10□□□□□ -0.81
HDLBP-208ENST00000422080 Q8N377 158 aa10□□□□□ -0.81
HDLBP-208ENST00000422080 ST20-AS1Q8NBB2 130 aa10□□□□□ -0.81
HDLBP-208ENST00000422080 SPANXDQ9BXN6 97 aa10□□□□□ -0.81
HDLBP-208ENST00000422080 SLC25A20O43772 301 aa9.98□□□□□ -0.81
HDLBP-208ENST00000422080 C9orf153Q5TBE3 101 aa9.98□□□□□ -0.81
HDLBP-208ENST00000422080 TTTY13Q9BZ97 58 aa9.98□□□□□ -0.81
HDLBP-208ENST00000422080 DHRS4-AS1Q9P1J3 65 aa9.98□□□□□ -0.81
HDLBP-208ENST00000422080 KRTDAPP60985 99 aa9.97□□□□□ -0.81
HDLBP-208ENST00000422080 FAT4Q6V0I7 4981 aa9.97□□□□□ -0.81
HDLBP-208ENST00000422080 SPRR1BP22528 89 aa9.96□□□□□ -0.82
HDLBP-208ENST00000422080 C20orf202A1L168 122 aa9.95□□□□□ -0.82
HDLBP-208ENST00000422080 SLC25A34Q6PIV7 304 aa9.95□□□□□ -0.82
HDLBP-208ENST00000422080 COX7BP24311 80 aa9.93□□□□□ -0.82
HDLBP-208ENST00000422080 ELOF1P60002 83 aaKnown RBP9.93□□□□□ -0.82
HDLBP-208ENST00000422080 ASB16-AS1Q495Z4 193 aa9.93□□□□□ -0.82
HDLBP-208ENST00000422080 LCE2AQ5TA79 106 aaPredicted RBP9.93□□□□□ -0.82
HDLBP-208ENST00000422080 SCGB1D4Q6XE38 83 aa9.93□□□□□ -0.82
HDLBP-208ENST00000422080 COPS9Q8WXC6 57 aa9.93□□□□□ -0.82
HDLBP-208ENST00000422080 C6orf99Q4VX62 202 aa9.92□□□□□ -0.82
HDLBP-208ENST00000422080 IFITM1P13164 125 aa9.91□□□□□ -0.82
HDLBP-208ENST00000422080 AKR1D1P51857 326 aa9.91□□□□□ -0.82
HDLBP-208ENST00000422080 ANKRD39Q53RE8 183 aa9.91□□□□□ -0.82
HDLBP-208ENST00000422080 LAMTOR3Q9UHA4 124 aa9.91□□□□□ -0.82
HDLBP-208ENST00000422080 TRBV7-6A0A0J9YX20 115 aa9.9□□□□□ -0.82
HDLBP-208ENST00000422080 Q6ZVH6 145 aa9.9□□□□□ -0.82
HDLBP-208ENST00000422080 SEC61BP60468 96 aaKnown RBP9.88□□□□□ -0.83
HDLBP-208ENST00000422080 ATOH7Q8N100 152 aa9.87□□□□□ -0.83
HDLBP-208ENST00000422080 TAL2Q16559 108 aa9.86□□□□□ -0.83
HDLBP-208ENST00000422080 SNRPEP62304 92 aaKnown RBP9.85□□□□□ -0.83
HDLBP-208ENST00000422080 PCP2Q8IVA1 136 aa9.85□□□□□ -0.83
HDLBP-208ENST00000422080 MUSTN1Q8IVN3 82 aa9.85□□□□□ -0.83
HDLBP-208ENST00000422080 LIMD2Q9BT23 127 aa9.85□□□□□ -0.83
HDLBP-208ENST00000422080 TEX49A0A1B0GTD5 131 aa9.84□□□□□ -0.83
HDLBP-208ENST00000422080 A0A1B0GWB2 263 aa9.84□□□□□ -0.83
HDLBP-208ENST00000422080 A6NDN8 102 aa9.84□□□□□ -0.83
HDLBP-208ENST00000422080 XP32Q5T750 250 aa9.83□□□□□ -0.84
HDLBP-208ENST00000422080 DEFB105AQ8NG35 78 aa9.83□□□□□ -0.84
HDLBP-208ENST00000422080 CD164Q04900 197 aa9.82□□□□□ -0.84
HDLBP-208ENST00000422080 HRCT1Q6UXD1 115 aa9.82□□□□□ -0.84
HDLBP-208ENST00000422080 A4D1N5 150 aa9.81□□□□□ -0.84
HDLBP-208ENST00000422080 PRO1933Q9H354 126 aa9.81□□□□□ -0.84
HDLBP-208ENST00000422080 TRAV13-2A0A0B4J235 113 aa9.8□□□□□ -0.84
HDLBP-208ENST00000422080 Q1RN00 199 aa9.8□□□□□ -0.84
HDLBP-208ENST00000422080 IGLV5-48A0A075B6I7 105 aa9.79□□□□□ -0.84
HDLBP-208ENST00000422080 SMIM29Q86T20 159 aa9.79□□□□□ -0.84
HDLBP-208ENST00000422080 KRTAP4-1Q9BYQ7 146 aa9.79□□□□□ -0.84
HDLBP-208ENST00000422080 LINC01547P58512 204 aaPredicted RBP9.77□□□□□ -0.85
HDLBP-208ENST00000422080 HIST3H2BBQ8N257 126 aa9.76□□□□□ -0.85
HDLBP-208ENST00000422080 SMIM11BQ8TCY0 68 aa9.76□□□□□ -0.85
HDLBP-208ENST00000422080 KRTAP9-2Q9BYQ4 174 aa9.76□□□□□ -0.85
HDLBP-208ENST00000422080 NHP2Q9NX24 153 aaKnown RBP9.76□□□□□ -0.85
HDLBP-208ENST00000422080 H7C2G1 150 aa9.75□□□□□ -0.85
HDLBP-208ENST00000422080 S100A2P29034 98 aa9.75□□□□□ -0.85
HDLBP-208ENST00000422080 Q5XG85 94 aa9.75□□□□□ -0.85
HDLBP-208ENST00000422080 HIST1H2BLQ99880 126 aa9.75□□□□□ -0.85
HDLBP-208ENST00000422080 HSBP1L1C9JCN9 74 aa9.73□□□□□ -0.85
HDLBP-208ENST00000422080 VAMP3Q15836 100 aa9.71□□□□□ -0.86
HDLBP-208ENST00000422080 S100A1P23297 94 aa9.68□□□□□ -0.86
HDLBP-208ENST00000422080 C9orf92A6NGG3 77 aa9.67□□□□□ -0.86
HDLBP-208ENST00000422080 S100A6P06703 90 aa9.67□□□□□ -0.86
HDLBP-208ENST00000422080 C1orf195Q5TG92 126 aa9.67□□□□□ -0.86
HDLBP-208ENST00000422080 LINC00575Q6W349 94 aa9.67□□□□□ -0.86
HDLBP-208ENST00000422080 A0A0G2JQZ4 141 aa9.66□□□□□ -0.86
HDLBP-208ENST00000422080 PCOTHQ58A44 107 aa9.64□□□□□ -0.87
HDLBP-208ENST00000422080 hADV29S1A0JD25 119 aa9.63□□□□□ -0.87
HDLBP-208ENST00000422080 F8WEM9 126 aa9.62□□□□□ -0.87
HDLBP-208ENST00000422080 TCL1BO95988 128 aa9.62□□□□□ -0.87
HDLBP-208ENST00000422080 SCGB1D1O95968 90 aa9.6□□□□□ -0.87
HDLBP-208ENST00000422080 Q6ZQY7 126 aa9.6□□□□□ -0.87
HDLBP-208ENST00000422080 IGLV8-61A0A075B6I0 122 aa9.59□□□□□ -0.87
HDLBP-208ENST00000422080 Q6JHZ5 121 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms