RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 DAND5Q8N907 189 aa4.51□□□□□ -1.69
AC012560.1-202ENST00000421324 MIEN1Q9BRT3 115 aa4.51□□□□□ -1.69
AC012560.1-202ENST00000421324 PKHD1L1Q86WI1 4243 aa4.5□□□□□ -1.69
AC012560.1-202ENST00000421324 LOC107984156A0A0G2JMH3 177 aa4.5□□□□□ -1.69
AC012560.1-202ENST00000421324 C20orf202A1L168 122 aa4.5□□□□□ -1.69
AC012560.1-202ENST00000421324 NCR3O14931 201 aa4.5□□□□□ -1.69
AC012560.1-202ENST00000421324 C3orf79P0CE67 100 aa4.5□□□□□ -1.69
AC012560.1-202ENST00000421324 CRYGAP11844 174 aa4.5□□□□□ -1.69
AC012560.1-202ENST00000421324 PRLHP81277 87 aa4.5□□□□□ -1.69
AC012560.1-202ENST00000421324 KRTAP13-1Q8IUC0 172 aa4.5□□□□□ -1.69
AC012560.1-202ENST00000421324 ARL17AQ8IVW1 177 aa4.5□□□□□ -1.69
AC012560.1-202ENST00000421324 FAT3Q8TDW7 4589 aa4.5□□□□□ -1.69
AC012560.1-202ENST00000421324 A0A0J9YXY3 114 aa4.49□□□□□ -1.69
AC012560.1-202ENST00000421324 AKR1D1P51857 326 aa4.49□□□□□ -1.69
AC012560.1-202ENST00000421324 KCNQ1DNQ9H478 68 aa4.49□□□□□ -1.69
AC012560.1-202ENST00000421324 TRBV10-3A0A0K0K1G6 114 aa4.48□□□□□ -1.69
AC012560.1-202ENST00000421324 TRBV10-2A0A0K0K1G8 114 aa4.48□□□□□ -1.69
AC012560.1-202ENST00000421324 ETDCA0A1B0GVM5 59 aa4.48□□□□□ -1.69
AC012560.1-202ENST00000421324 S100A7L2Q5SY68 101 aa4.48□□□□□ -1.69
AC012560.1-202ENST00000421324 TYMSOSQ8TAI1 123 aa4.48□□□□□ -1.69
AC012560.1-202ENST00000421324 HIGD2AQ9BW72 106 aa4.48□□□□□ -1.69
AC012560.1-202ENST00000421324 SPANXB1Q9NS25 103 aaPredicted RBP4.48□□□□□ -1.69
AC012560.1-202ENST00000421324 ANAPC11Q9NYG5 84 aa4.48□□□□□ -1.69
AC012560.1-202ENST00000421324 ZNF815PA8K554 130 aa4.47□□□□□ -1.69
AC012560.1-202ENST00000421324 NDUFC2O95298 119 aa4.47□□□□□ -1.69
AC012560.1-202ENST00000421324 DDTP30046 118 aa4.47□□□□□ -1.69
AC012560.1-202ENST00000421324 NPC2P61916 151 aa4.47□□□□□ -1.69
AC012560.1-202ENST00000421324 FAM229BQ4G0N7 80 aa4.47□□□□□ -1.69
AC012560.1-202ENST00000421324 ADAMTSL4-AS1Q5T5F5 129 aa4.47□□□□□ -1.69
AC012560.1-202ENST00000421324 LINC00337Q8N6G1 96 aa4.47□□□□□ -1.69
AC012560.1-202ENST00000421324 A0A087X002 238 aa4.46□□□□□ -1.7
AC012560.1-202ENST00000421324 TIMM17BO60830 172 aa4.46□□□□□ -1.7
AC012560.1-202ENST00000421324 S100A6P06703 90 aa4.46□□□□□ -1.7
AC012560.1-202ENST00000421324 S100A2P29034 98 aa4.46□□□□□ -1.7
AC012560.1-202ENST00000421324 SPRR1AP35321 89 aa4.46□□□□□ -1.7
AC012560.1-202ENST00000421324 CBY1Q9Y3M2 126 aa4.46□□□□□ -1.7
AC012560.1-202ENST00000421324 ZNF706Q9Y5V0 76 aaPredicted RBP4.46□□□□□ -1.7
AC012560.1-202ENST00000421324 TSPAN13O95857 204 aa4.45□□□□□ -1.7
AC012560.1-202ENST00000421324 SCGB1D4Q6XE38 83 aa4.45□□□□□ -1.7
AC012560.1-202ENST00000421324 LINC00308Q8TCZ7 52 aa4.45□□□□□ -1.7
AC012560.1-202ENST00000421324 SMCR5Q8TEV8 140 aa4.45□□□□□ -1.7
AC012560.1-202ENST00000421324 KRTAP4-16G5E9R7 235 aaPredicted RBP4.44□□□□□ -1.7
AC012560.1-202ENST00000421324 IGLV6-57P01721 117 aa4.44□□□□□ -1.7
AC012560.1-202ENST00000421324 HINT1P49773 126 aaPredicted RBP4.44□□□□□ -1.7
AC012560.1-202ENST00000421324 SNRPEP62304 92 aaKnown RBP4.44□□□□□ -1.7
AC012560.1-202ENST00000421324 SOSTDC1Q6X4U4 206 aa4.44□□□□□ -1.7
AC012560.1-202ENST00000421324 ATOH7Q8N100 152 aa4.44□□□□□ -1.7
AC012560.1-202ENST00000421324 OR13C6PQ8NH95 151 aa4.44□□□□□ -1.7
AC012560.1-202ENST00000421324 COPS9Q8WXC6 57 aa4.44□□□□□ -1.7
AC012560.1-202ENST00000421324 SPRR4Q96PI1 79 aa4.44□□□□□ -1.7
AC012560.1-202ENST00000421324 LITAFQ99732 161 aa4.44□□□□□ -1.7
AC012560.1-202ENST00000421324 TTTY13Q9BZ97 58 aa4.44□□□□□ -1.7
AC012560.1-202ENST00000421324 SPANXCQ9NY87 97 aa4.44□□□□□ -1.7
AC012560.1-202ENST00000421324 HMCN2Q8NDA2 5059 aa4.43□□□□□ -1.7
AC012560.1-202ENST00000421324 TRAV23DV6A0A075B6W5 121 aa4.43□□□□□ -1.7
AC012560.1-202ENST00000421324 JOSD1Q15040 202 aaPredicted RBP4.43□□□□□ -1.7
AC012560.1-202ENST00000421324 PRR4Q16378 134 aa4.43□□□□□ -1.7
AC012560.1-202ENST00000421324 KRTAP13-2Q52LG2 175 aa4.43□□□□□ -1.7
AC012560.1-202ENST00000421324 LINC00518Q8N0U6 118 aa4.43□□□□□ -1.7
AC012560.1-202ENST00000421324 HIST3H2BBQ8N257 126 aa4.43□□□□□ -1.7
AC012560.1-202ENST00000421324 HIST1H2BLQ99880 126 aa4.43□□□□□ -1.7
AC012560.1-202ENST00000421324 HSBP1L1C9JCN9 74 aa4.42□□□□□ -1.7
AC012560.1-202ENST00000421324 ZNF73O43830 326 aaPredicted RBP4.42□□□□□ -1.7
AC012560.1-202ENST00000421324 LINC00304Q8N9R0 145 aa4.42□□□□□ -1.7
AC012560.1-202ENST00000421324 TNXBP22105 4242 aa4.41□□□□□ -1.7
AC012560.1-202ENST00000421324 IFITM1P13164 125 aa4.41□□□□□ -1.7
AC012560.1-202ENST00000421324 GAGE2AQ6NT46 116 aa4.41□□□□□ -1.7
AC012560.1-202ENST00000421324 Q6ZRX8 168 aa4.41□□□□□ -1.7
AC012560.1-202ENST00000421324 Q6ZVH6 145 aa4.41□□□□□ -1.7
AC012560.1-202ENST00000421324 SPANXDQ9BXN6 97 aa4.41□□□□□ -1.7
AC012560.1-202ENST00000421324 PPDPFQ9H3Y8 114 aa4.41□□□□□ -1.7
AC012560.1-202ENST00000421324 CTAG1AP78358 180 aa4.4□□□□□ -1.71
AC012560.1-202ENST00000421324 PCP2Q8IVA1 136 aa4.4□□□□□ -1.71
AC012560.1-202ENST00000421324 C3orf22Q8N5N4 141 aa4.4□□□□□ -1.71
AC012560.1-202ENST00000421324 ERC2-IT1O76042 136 aa4.39□□□□□ -1.71
AC012560.1-202ENST00000421324 SCGB1D1O95968 90 aa4.39□□□□□ -1.71
AC012560.1-202ENST00000421324 SPAG11AQ6PDA7 123 aa4.39□□□□□ -1.71
AC012560.1-202ENST00000421324 MUSTN1Q8IVN3 82 aa4.39□□□□□ -1.71
AC012560.1-202ENST00000421324 Q9BRP9 147 aa4.39□□□□□ -1.71
AC012560.1-202ENST00000421324 A6NDN8 102 aa4.38□□□□□ -1.71
AC012560.1-202ENST00000421324 C5orf52A6NGY3 159 aa4.38□□□□□ -1.71
AC012560.1-202ENST00000421324 LINC00483Q53H64 154 aa4.38□□□□□ -1.71
AC012560.1-202ENST00000421324 DHRS4-AS1Q9P1J3 65 aa4.38□□□□□ -1.71
AC012560.1-202ENST00000421324 UBR4Q5T4S7 5183 aa4.38□□□□□ -1.71
AC012560.1-202ENST00000421324 COX7BP24311 80 aa4.37□□□□□ -1.71
AC012560.1-202ENST00000421324 SSBP3-AS1Q7Z2R9 100 aa4.37□□□□□ -1.71
AC012560.1-202ENST00000421324 Q8NBF4 154 aa4.37□□□□□ -1.71
AC012560.1-202ENST00000421324 IGLV9-49A0A0B4J1Y8 123 aa4.36□□□□□ -1.71
AC012560.1-202ENST00000421324 C6orf99Q4VX62 202 aa4.36□□□□□ -1.71
AC012560.1-202ENST00000421324 TRAV13-2A0A0B4J235 113 aa4.35□□□□□ -1.71
AC012560.1-202ENST00000421324 TRBV7-6A0A0J9YX20 115 aa4.35□□□□□ -1.71
AC012560.1-202ENST00000421324 SPINK1P00995 79 aa4.35□□□□□ -1.71
AC012560.1-202ENST00000421324 MOBPQ13875 183 aa4.35□□□□□ -1.71
AC012560.1-202ENST00000421324 SLC25A34Q6PIV7 304 aa4.35□□□□□ -1.71
AC012560.1-202ENST00000421324 ST20-AS1Q8NBB2 130 aa4.35□□□□□ -1.71
AC012560.1-202ENST00000421324 RETNLBQ9BQ08 111 aa4.35□□□□□ -1.71
AC012560.1-202ENST00000421324 IGLV7-46A0A075B6I9 117 aa4.34□□□□□ -1.71
AC012560.1-202ENST00000421324 ELOF1P60002 83 aaKnown RBP4.34□□□□□ -1.71
AC012560.1-202ENST00000421324 KRTAP10-6P60371 365 aaPredicted RBP4.34□□□□□ -1.71
AC012560.1-202ENST00000421324 TAL2Q16559 108 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms