RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 ACYP1P07311 99 aa5.69□□□□□ -1.5
SNCA-206ENST00000420646 C3orf22Q8N5N4 141 aa5.69□□□□□ -1.5
SNCA-206ENST00000420646 MUC7Q8TAX7 377 aa5.69□□□□□ -1.5
SNCA-206ENST00000420646 LAMTOR3Q9UHA4 124 aa5.69□□□□□ -1.5
SNCA-206ENST00000420646 DYNC2H1Q8NCM8 4307 aaKnown RBP5.68□□□□□ -1.5
SNCA-206ENST00000420646 TMEM256-PLSCR3K7ERE1 68 aa5.68□□□□□ -1.5
SNCA-206ENST00000420646 FUSP35637 526 aaKnown RBP eCLIP5.68□□□□□ -1.5
SNCA-206ENST00000420646 NKAPP1Q8N9T2 125 aa5.68□□□□□ -1.5
SNCA-206ENST00000420646 UPK3BQ9BT76 320 aa5.68□□□□□ -1.5
SNCA-206ENST00000420646 PSCAO43653 123 aa5.68□□□□□ -1.5
SNCA-206ENST00000420646 COX7BP24311 80 aa5.68□□□□□ -1.5
SNCA-206ENST00000420646 CYSTM1Q9H1C7 97 aa5.68□□□□□ -1.5
SNCA-206ENST00000420646 UQCRQO14949 82 aa5.68□□□□□ -1.5
SNCA-206ENST00000420646 IGKV3D-7A0A0C4DH55 119 aa5.67□□□□□ -1.5
SNCA-206ENST00000420646 ELOF1P60002 83 aaKnown RBP5.67□□□□□ -1.5
SNCA-206ENST00000420646 SDIM1Q6ZPB5 146 aa5.67□□□□□ -1.5
SNCA-206ENST00000420646 DEFB105AQ8NG35 78 aa5.67□□□□□ -1.5
SNCA-206ENST00000420646 LINC00643Q86TS7 51 aa5.66□□□□□ -1.5
SNCA-206ENST00000420646 DNAH2Q9P225 4427 aa5.66□□□□□ -1.5
SNCA-206ENST00000420646 A0A1B0GX51 115 aa5.65□□□□□ -1.5
SNCA-206ENST00000420646 J3KT08 172 aa5.65□□□□□ -1.5
SNCA-206ENST00000420646 CHTF8P0CG12 524 aa5.65□□□□□ -1.5
SNCA-206ENST00000420646 C4orf26Q17RF5 130 aa5.65□□□□□ -1.51
SNCA-206ENST00000420646 LINC00528Q8N1L1 170 aa5.65□□□□□ -1.51
SNCA-206ENST00000420646 RMI2Q96E14 147 aa5.65□□□□□ -1.51
SNCA-206ENST00000420646 VPS13DQ5THJ4 4388 aa5.64□□□□□ -1.51
SNCA-206ENST00000420646 A0A096LNI7 61 aa5.64□□□□□ -1.51
SNCA-206ENST00000420646 CCKP06307 115 aa5.64□□□□□ -1.51
SNCA-206ENST00000420646 RBM3P98179 157 aaKnown RBP5.64□□□□□ -1.51
SNCA-206ENST00000420646 A0A087WVE0 104 aa5.63□□□□□ -1.51
SNCA-206ENST00000420646 OXTP01178 125 aa5.63□□□□□ -1.51
SNCA-206ENST00000420646 COX7CP15954 63 aa5.63□□□□□ -1.51
SNCA-206ENST00000420646 A0A1W2PNN7 141 aa5.63□□□□□ -1.51
SNCA-206ENST00000420646 JMJD7-PLA2G4BH0Y9G9 81 aa5.63□□□□□ -1.51
SNCA-206ENST00000420646 TLX1NBP0CAT3 122 aa5.63□□□□□ -1.51
SNCA-206ENST00000420646 HRCT1Q6UXD1 115 aa5.63□□□□□ -1.51
SNCA-206ENST00000420646 ST20-AS1Q8NBB2 130 aa5.62□□□□□ -1.51
SNCA-206ENST00000420646 KCNQ1DNQ9H478 68 aa5.62□□□□□ -1.51
SNCA-206ENST00000420646 Q9BRP9 147 aa5.62□□□□□ -1.51
SNCA-206ENST00000420646 IGLV1-50A0A075B6I6 118 aa5.61□□□□□ -1.51
SNCA-206ENST00000420646 ERC2-IT1O76042 136 aa5.61□□□□□ -1.51
SNCA-206ENST00000420646 DSCR8Q96T75 97 aa5.61□□□□□ -1.51
SNCA-206ENST00000420646 Q6ZQT0 140 aa5.61□□□□□ -1.51
SNCA-206ENST00000420646 MRPL55Q7Z7F7 128 aaKnown RBP5.61□□□□□ -1.51
SNCA-206ENST00000420646 CRYGAP11844 174 aa5.61□□□□□ -1.51
SNCA-206ENST00000420646 F8WDY8 70 aa5.6□□□□□ -1.51
SNCA-206ENST00000420646 NBDYA0A0U1RRE5 68 aa5.6□□□□□ -1.51
SNCA-206ENST00000420646 ATOX1O00244 68 aa5.6□□□□□ -1.51
SNCA-206ENST00000420646 RPS28P62857 69 aaKnown RBP5.6□□□□□ -1.51
SNCA-206ENST00000420646 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.6□□□□□ -1.51
SNCA-206ENST00000420646 KRTAP11-1Q8IUC1 163 aa5.6□□□□□ -1.51
SNCA-206ENST00000420646 PANO1I0J062 215 aa5.59□□□□□ -1.51
SNCA-206ENST00000420646 KRTAP4-16G5E9R7 235 aaPredicted RBP5.59□□□□□ -1.52
SNCA-206ENST00000420646 HIST1H4AP62805 103 aaKnown RBP5.59□□□□□ -1.52
SNCA-206ENST00000420646 Q8N377 158 aa5.59□□□□□ -1.52
SNCA-206ENST00000420646 HECTD4Q9Y4D8 3996 aa5.59□□□□□ -1.52
SNCA-206ENST00000420646 A0A0G2JQZ4 141 aa5.58□□□□□ -1.52
SNCA-206ENST00000420646 ETDCA0A1B0GVM5 59 aa5.58□□□□□ -1.52
SNCA-206ENST00000420646 PRLHP81277 87 aa5.58□□□□□ -1.52
SNCA-206ENST00000420646 Q6ZRX8 168 aa5.58□□□□□ -1.52
SNCA-206ENST00000420646 DPH3Q96FX2 82 aa5.58□□□□□ -1.52
SNCA-206ENST00000420646 FRAS1Q86XX4 4008 aa5.58□□□□□ -1.52
SNCA-206ENST00000420646 TRBV7-6A0A0J9YX20 115 aa5.58□□□□□ -1.52
SNCA-206ENST00000420646 LRCOL1A6NCL2 159 aa5.58□□□□□ -1.52
SNCA-206ENST00000420646 NUPR2A6NF83 97 aa5.58□□□□□ -1.52
SNCA-206ENST00000420646 UBE2BP63146 152 aa5.58□□□□□ -1.52
SNCA-206ENST00000420646 SCXQ7RTU7 201 aa5.57□□□□□ -1.52
SNCA-206ENST00000420646 PHF5AQ7RTV0 110 aaKnown RBP5.57□□□□□ -1.52
SNCA-206ENST00000420646 FAM19A1Q7Z5A9 133 aa5.57□□□□□ -1.52
SNCA-206ENST00000420646 PLA2G2DQ9UNK4 145 aa5.57□□□□□ -1.52
SNCA-206ENST00000420646 RYR3Q15413 4870 aa5.57□□□□□ -1.52
SNCA-206ENST00000420646 C16orf90A8MZG2 172 aa5.56□□□□□ -1.52
SNCA-206ENST00000420646 LINC01547P58512 204 aaPredicted RBP5.56□□□□□ -1.52
SNCA-206ENST00000420646 TMEM258P61165 79 aa5.56□□□□□ -1.52
SNCA-206ENST00000420646 CNBPP62633 177 aaKnown RBP5.56□□□□□ -1.52
SNCA-206ENST00000420646 HAMPP81172 84 aa5.56□□□□□ -1.52
SNCA-206ENST00000420646 Q5XG85 94 aa5.56□□□□□ -1.52
SNCA-206ENST00000420646 Q6ZRN7 208 aaPredicted RBP5.56□□□□□ -1.52
SNCA-206ENST00000420646 DNAH6Q9C0G6 4158 aa5.55□□□□□ -1.52
SNCA-206ENST00000420646 LOC110117498A0A087WWA1 95 aa5.55□□□□□ -1.52
SNCA-206ENST00000420646 TRBV7-4A0A0J9YYF1 115 aa5.55□□□□□ -1.52
SNCA-206ENST00000420646 IGLV5-37A0A075B6J1 123 aa5.55□□□□□ -1.52
SNCA-206ENST00000420646 C3orf84H3BNL1 204 aa5.55□□□□□ -1.52
SNCA-206ENST00000420646 SPRR1AP35321 89 aa5.55□□□□□ -1.52
SNCA-206ENST00000420646 REG3GQ6UW15 175 aa5.55□□□□□ -1.52
SNCA-206ENST00000420646 HIGD2AQ9BW72 106 aa5.54□□□□□ -1.52
SNCA-206ENST00000420646 UBL5Q9BZL1 73 aa5.54□□□□□ -1.52
SNCA-206ENST00000420646 Q6JHZ5 121 aa5.54□□□□□ -1.52
SNCA-206ENST00000420646 SERP2Q8N6R1 65 aa5.54□□□□□ -1.52
SNCA-206ENST00000420646 HYDINQ4G0P3 5121 aa5.54□□□□□ -1.52
SNCA-206ENST00000420646 PRYO14603 147 aa5.54□□□□□ -1.52
SNCA-206ENST00000420646 Q6ZVQ6 151 aa5.54□□□□□ -1.52
SNCA-206ENST00000420646 C9orf163Q8N9P6 203 aa5.52□□□□□ -1.53
SNCA-206ENST00000420646 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.52□□□□□ -1.53
SNCA-206ENST00000420646 Q8N9L7 120 aa5.52□□□□□ -1.53
SNCA-206ENST00000420646 DHRS4-AS1Q9P1J3 65 aa5.52□□□□□ -1.53
SNCA-206ENST00000420646 DNAH17Q9UFH2 4485 aa5.51□□□□□ -1.53
SNCA-206ENST00000420646 DNAH8Q96JB1 4490 aa5.51□□□□□ -1.53
SNCA-206ENST00000420646 LY6G6CO95867 125 aa5.5□□□□□ -1.53
SNCA-206ENST00000420646 LINC00336Q6ZUF6 198 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms