RNA–Protein interactions for RNA: ENST00000420316.6

EGFR-204, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-204ENST00000420316 KRTAP13-1Q8IUC0 172 aa12.28□□□□□ -0.44
EGFR-204ENST00000420316 TRAV23DV6A0A075B6W5 121 aa12.27□□□□□ -0.44
EGFR-204ENST00000420316 SMIM6P0DI80 62 aa12.27□□□□□ -0.44
EGFR-204ENST00000420316 RPL28P46779 137 aaKnown RBP12.27□□□□□ -0.44
EGFR-204ENST00000420316 LINC00518Q8N0U6 118 aa12.27□□□□□ -0.44
EGFR-204ENST00000420316 PPDPFQ9H3Y8 114 aa12.27□□□□□ -0.44
EGFR-204ENST00000420316 A6NDN8 102 aa12.26□□□□□ -0.45
EGFR-204ENST00000420316 H0Y9J4 135 aa12.26□□□□□ -0.45
EGFR-204ENST00000420316 SPRR1AP35321 89 aa12.26□□□□□ -0.45
EGFR-204ENST00000420316 ETDCA0A1B0GVM5 59 aa12.26□□□□□ -0.45
EGFR-204ENST00000420316 KRTAP4-16G5E9R7 235 aaPredicted RBP12.25□□□□□ -0.45
EGFR-204ENST00000420316 UQCR10Q9UDW1 63 aa12.24□□□□□ -0.45
EGFR-204ENST00000420316 DMBT1Q9UGM3 2413 aaPredicted RBP12.23□□□□□ -0.45
EGFR-204ENST00000420316 J3QL48 77 aa12.22□□□□□ -0.45
EGFR-204ENST00000420316 ZNF73O43830 326 aaPredicted RBP12.22□□□□□ -0.45
EGFR-204ENST00000420316 HIGD2AQ9BW72 106 aa12.22□□□□□ -0.45
EGFR-204ENST00000420316 B5MCH6 92 aa12.22□□□□□ -0.45
EGFR-204ENST00000420316 LINC01600Q96MT4 127 aa12.22□□□□□ -0.45
EGFR-204ENST00000420316 CEND1Q8N111 149 aa12.2□□□□□ -0.46
EGFR-204ENST00000420316 TRAV13-2A0A0B4J235 113 aa12.18□□□□□ -0.46
EGFR-204ENST00000420316 FXYD2P54710 66 aa12.18□□□□□ -0.46
EGFR-204ENST00000420316 CBY1Q9Y3M2 126 aa12.18□□□□□ -0.46
EGFR-204ENST00000420316 TAL2Q16559 108 aa12.18□□□□□ -0.46
EGFR-204ENST00000420316 C6orf99Q4VX62 202 aa12.18□□□□□ -0.46
EGFR-204ENST00000420316 SMCR5Q8TEV8 140 aa12.17□□□□□ -0.46
EGFR-204ENST00000420316 ANAPC11Q9NYG5 84 aa12.17□□□□□ -0.46
EGFR-204ENST00000420316 KRTAP1-4P0C5Y4 121 aa12.16□□□□□ -0.46
EGFR-204ENST00000420316 CFC1BP0CG36 223 aa12.16□□□□□ -0.46
EGFR-204ENST00000420316 CFC1P0CG37 223 aa12.16□□□□□ -0.46
EGFR-204ENST00000420316 RPL13AP40429 203 aaKnown RBP12.16□□□□□ -0.46
EGFR-204ENST00000420316 SMIM11BQ8TCY0 68 aa12.16□□□□□ -0.46
EGFR-204ENST00000420316 Q9BRP9 147 aa12.16□□□□□ -0.46
EGFR-204ENST00000420316 MT1HL1P0DM35 61 aa12.15□□□□□ -0.46
EGFR-204ENST00000420316 HSD52Q0P140 79 aa12.15□□□□□ -0.46
EGFR-204ENST00000420316 Q6ZRX8 168 aa12.15□□□□□ -0.46
EGFR-204ENST00000420316 ERC2-IT1O76042 136 aa12.14□□□□□ -0.47
EGFR-204ENST00000420316 HERC1Q15751 4861 aa12.13□□□□□ -0.47
EGFR-204ENST00000420316 TNXBP22105 4242 aa12.13□□□□□ -0.47
EGFR-204ENST00000420316 H7C2G1 150 aa12.13□□□□□ -0.47
EGFR-204ENST00000420316 KRTAP10-8P60410 259 aa12.12□□□□□ -0.47
EGFR-204ENST00000420316 PRR26Q8N8Z3 221 aa12.12□□□□□ -0.47
EGFR-204ENST00000420316 RAB37Q96AX2 223 aa12.12□□□□□ -0.47
EGFR-204ENST00000420316 COX7BP24311 80 aa12.11□□□□□ -0.47
EGFR-204ENST00000420316 HINT1P49773 126 aaPredicted RBP12.11□□□□□ -0.47
EGFR-204ENST00000420316 ELOF1P60002 83 aaKnown RBP12.09□□□□□ -0.47
EGFR-204ENST00000420316 NHP2Q9NX24 153 aaKnown RBP12.09□□□□□ -0.47
EGFR-204ENST00000420316 A0A0B4J2C4 111 aa12.07□□□□□ -0.48
EGFR-204ENST00000420316 TMEM238LA0A1B0GVL6 79 aa12.07□□□□□ -0.48
EGFR-204ENST00000420316 A6NJY4 79 aa12.07□□□□□ -0.48
EGFR-204ENST00000420316 K7ERJ3 54 aa12.07□□□□□ -0.48
EGFR-204ENST00000420316 CTAG1AP78358 180 aa12.07□□□□□ -0.48
EGFR-204ENST00000420316 SPRR4Q96PI1 79 aa12.06□□□□□ -0.48
EGFR-204ENST00000420316 A0A087X002 238 aa12.05□□□□□ -0.48
EGFR-204ENST00000420316 ST20-AS1Q8NBB2 130 aa12.05□□□□□ -0.48
EGFR-204ENST00000420316 BVES-AS1Q5T3Y7 98 aa12.05□□□□□ -0.48
EGFR-204ENST00000420316 TSTD3H0UI37 97 aa12.04□□□□□ -0.48
EGFR-204ENST00000420316 A0A1B0GWB2 263 aa12.03□□□□□ -0.48
EGFR-204ENST00000420316 PRO1854Q9UHT4 67 aa12.03□□□□□ -0.48
EGFR-204ENST00000420316 Q1RN00 199 aa12.02□□□□□ -0.49
EGFR-204ENST00000420316 GAGE2AQ6NT46 116 aa12.02□□□□□ -0.49
EGFR-204ENST00000420316 TRBV7-6A0A0J9YX20 115 aa12.01□□□□□ -0.49
EGFR-204ENST00000420316 FAM229BQ4G0N7 80 aa12.01□□□□□ -0.49
EGFR-204ENST00000420316 ZNF706Q9Y5V0 76 aaPredicted RBP12.01□□□□□ -0.49
EGFR-204ENST00000420316 CRYGAP11844 174 aa12.01□□□□□ -0.49
EGFR-204ENST00000420316 DHRS4-AS1Q9P1J3 65 aa12.01□□□□□ -0.49
EGFR-204ENST00000420316 KRTAP13-2Q52LG2 175 aa12□□□□□ -0.49
EGFR-204ENST00000420316 VAMP3Q15836 100 aa11.98□□□□□ -0.49
EGFR-204ENST00000420316 C3orf22Q8N5N4 141 aa11.97□□□□□ -0.49
EGFR-204ENST00000420316 DEFB105AQ8NG35 78 aa11.96□□□□□ -0.5
EGFR-204ENST00000420316 LINC00575Q6W349 94 aa11.94□□□□□ -0.5
EGFR-204ENST00000420316 TYMSOSQ8TAI1 123 aa11.94□□□□□ -0.5
EGFR-204ENST00000420316 LINC00483Q53H64 154 aa11.93□□□□□ -0.5
EGFR-204ENST00000420316 TSPAN13O95857 204 aa11.92□□□□□ -0.5
EGFR-204ENST00000420316 M0R143 59 aa11.92□□□□□ -0.5
EGFR-204ENST00000420316 TRIAP1O43715 76 aa11.92□□□□□ -0.5
EGFR-204ENST00000420316 BATFQ16520 125 aa11.92□□□□□ -0.5
EGFR-204ENST00000420316 IGLV9-49A0A0B4J1Y8 123 aa11.91□□□□□ -0.5
EGFR-204ENST00000420316 SLC25A20O43772 301 aa11.9□□□□□ -0.5
EGFR-204ENST00000420316 FAM218AQ96MZ4 157 aa11.9□□□□□ -0.5
EGFR-204ENST00000420316 hADV29S1A0JD25 119 aa11.89□□□□□ -0.51
EGFR-204ENST00000420316 PSMB2P49721 201 aa11.89□□□□□ -0.51
EGFR-204ENST00000420316 LINC01547P58512 204 aaPredicted RBP11.88□□□□□ -0.51
EGFR-204ENST00000420316 Q6ZQY7 126 aa11.87□□□□□ -0.51
EGFR-204ENST00000420316 CLEC2BQ92478 149 aa11.86□□□□□ -0.51
EGFR-204ENST00000420316 NAA38Q9BRA0 125 aaKnown RBP11.86□□□□□ -0.51
EGFR-204ENST00000420316 MOBPQ13875 183 aa11.85□□□□□ -0.51
EGFR-204ENST00000420316 H0YGX0 51 aa11.84□□□□□ -0.51
EGFR-204ENST00000420316 SPRR1BP22528 89 aa11.84□□□□□ -0.51
EGFR-204ENST00000420316 TEX49A0A1B0GTD5 131 aa11.83□□□□□ -0.52
EGFR-204ENST00000420316 C9orf153Q5TBE3 101 aa11.83□□□□□ -0.52
EGFR-204ENST00000420316 Q8N377 158 aa11.83□□□□□ -0.52
EGFR-204ENST00000420316 IGLV5-48A0A075B6I7 105 aa11.82□□□□□ -0.52
EGFR-204ENST00000420316 HMCN2Q8NDA2 5059 aa11.8□□□□□ -0.52
EGFR-204ENST00000420316 SMIM29Q86T20 159 aa11.8□□□□□ -0.52
EGFR-204ENST00000420316 Q8NBF4 154 aa11.8□□□□□ -0.52
EGFR-204ENST00000420316 LINC00304Q8N9R0 145 aa11.79□□□□□ -0.52
EGFR-204ENST00000420316 LAMTOR3Q9UHA4 124 aa11.79□□□□□ -0.52
EGFR-204ENST00000420316 PCP4L1A6NKN8 68 aa11.78□□□□□ -0.52
EGFR-204ENST00000420316 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.78□□□□□ -0.52
EGFR-204ENST00000420316 COX6CP09669 75 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms