RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 Q6ZRX8 168 aa11.92□□□□□ -0.5
PKNOX1-202ENST00000418336 LINC00304Q8N9R0 145 aa11.92□□□□□ -0.5
PKNOX1-202ENST00000418336 HIST1H2BLQ99880 126 aa11.92□□□□□ -0.5
PKNOX1-202ENST00000418336 SPANXCQ9NY87 97 aa11.92□□□□□ -0.5
PKNOX1-202ENST00000418336 TRAV23DV6A0A075B6W5 121 aa11.91□□□□□ -0.5
PKNOX1-202ENST00000418336 C20orf202A1L168 122 aa11.89□□□□□ -0.51
PKNOX1-202ENST00000418336 S100A7L2Q5SY68 101 aa11.89□□□□□ -0.51
PKNOX1-202ENST00000418336 SPANXDQ9BXN6 97 aa11.89□□□□□ -0.51
PKNOX1-202ENST00000418336 ZNF706Q9Y5V0 76 aaPredicted RBP11.89□□□□□ -0.51
PKNOX1-202ENST00000418336 ZNF73O43830 326 aaPredicted RBP11.88□□□□□ -0.51
PKNOX1-202ENST00000418336 PRR4Q16378 134 aa11.88□□□□□ -0.51
PKNOX1-202ENST00000418336 PCP2Q8IVA1 136 aa11.88□□□□□ -0.51
PKNOX1-202ENST00000418336 CTAG1AP78358 180 aa11.86□□□□□ -0.51
PKNOX1-202ENST00000418336 PPDPFQ9H3Y8 114 aa11.86□□□□□ -0.51
PKNOX1-202ENST00000418336 MUC2Q02817 5179 aa11.86□□□□□ -0.51
PKNOX1-202ENST00000418336 S100A12P80511 92 aa11.85□□□□□ -0.51
PKNOX1-202ENST00000418336 RETNLBQ9BQ08 111 aa11.82□□□□□ -0.52
PKNOX1-202ENST00000418336 AKR1D1P51857 326 aa11.81□□□□□ -0.52
PKNOX1-202ENST00000418336 GAGE2AQ6NT46 116 aa11.81□□□□□ -0.52
PKNOX1-202ENST00000418336 MUC17Q685J3 4493 aa11.81□□□□□ -0.52
PKNOX1-202ENST00000418336 SCGB1D4Q6XE38 83 aa11.8□□□□□ -0.52
PKNOX1-202ENST00000418336 SNRPEP62304 92 aaKnown RBP11.79□□□□□ -0.52
PKNOX1-202ENST00000418336 ST20-AS1Q8NBB2 130 aa11.79□□□□□ -0.52
PKNOX1-202ENST00000418336 Q8NBF4 154 aa11.79□□□□□ -0.52
PKNOX1-202ENST00000418336 C5orf52A6NGY3 159 aa11.77□□□□□ -0.53
PKNOX1-202ENST00000418336 IFITM1P13164 125 aa11.77□□□□□ -0.53
PKNOX1-202ENST00000418336 S100A2P29034 98 aa11.77□□□□□ -0.53
PKNOX1-202ENST00000418336 JOSD1Q15040 202 aaPredicted RBP11.77□□□□□ -0.53
PKNOX1-202ENST00000418336 Q6ZVH6 145 aa11.77□□□□□ -0.53
PKNOX1-202ENST00000418336 MUSTN1Q8IVN3 82 aa11.77□□□□□ -0.53
PKNOX1-202ENST00000418336 LINC00518Q8N0U6 118 aa11.77□□□□□ -0.53
PKNOX1-202ENST00000418336 SPAG11AQ6PDA7 123 aa11.76□□□□□ -0.53
PKNOX1-202ENST00000418336 OR13C6PQ8NH95 151 aa11.76□□□□□ -0.53
PKNOX1-202ENST00000418336 ELOF1P60002 83 aaKnown RBP11.75□□□□□ -0.53
PKNOX1-202ENST00000418336 CBY1Q9Y3M2 126 aa11.74□□□□□ -0.53
PKNOX1-202ENST00000418336 S100A6P06703 90 aa11.73□□□□□ -0.53
PKNOX1-202ENST00000418336 SPRR1BP22528 89 aa11.73□□□□□ -0.53
PKNOX1-202ENST00000418336 MOBPQ13875 183 aa11.72□□□□□ -0.53
PKNOX1-202ENST00000418336 C6orf99Q4VX62 202 aa11.72□□□□□ -0.53
PKNOX1-202ENST00000418336 IGLV9-49A0A0B4J1Y8 123 aa11.71□□□□□ -0.53
PKNOX1-202ENST00000418336 SSBP3-AS1Q7Z2R9 100 aa11.71□□□□□ -0.53
PKNOX1-202ENST00000418336 DHRS4-AS1Q9P1J3 65 aa11.69□□□□□ -0.54
PKNOX1-202ENST00000418336 SPINK1P00995 79 aa11.68□□□□□ -0.54
PKNOX1-202ENST00000418336 COX7BP24311 80 aa11.68□□□□□ -0.54
PKNOX1-202ENST00000418336 HINT1P49773 126 aaPredicted RBP11.68□□□□□ -0.54
PKNOX1-202ENST00000418336 TPRXLQ17RH7 258 aa11.68□□□□□ -0.54
PKNOX1-202ENST00000418336 COPS9Q8WXC6 57 aa11.68□□□□□ -0.54
PKNOX1-202ENST00000418336 TRBV7-6A0A0J9YX20 115 aa11.67□□□□□ -0.54
PKNOX1-202ENST00000418336 IGLV7-46A0A075B6I9 117 aa11.66□□□□□ -0.54
PKNOX1-202ENST00000418336 RPS29P62273 56 aaKnown RBP11.65□□□□□ -0.54
PKNOX1-202ENST00000418336 LINC01547P58512 204 aaPredicted RBP11.64□□□□□ -0.55
PKNOX1-202ENST00000418336 Q8N377 158 aa11.64□□□□□ -0.55
PKNOX1-202ENST00000418336 C4orf48Q5BLP8 95 aa11.63□□□□□ -0.55
PKNOX1-202ENST00000418336 A6NDN8 102 aa11.62□□□□□ -0.55
PKNOX1-202ENST00000418336 HSBP1L1C9JCN9 74 aa11.62□□□□□ -0.55
PKNOX1-202ENST00000418336 FP248Q71RG6 208 aaPredicted RBP11.62□□□□□ -0.55
PKNOX1-202ENST00000418336 SMIM11BQ8TCY0 68 aa11.62□□□□□ -0.55
PKNOX1-202ENST00000418336 A0A1B0GWB2 263 aa11.61□□□□□ -0.55
PKNOX1-202ENST00000418336 SCGB1D1O95968 90 aa11.61□□□□□ -0.55
PKNOX1-202ENST00000418336 TRAV13-2A0A0B4J235 113 aa11.6□□□□□ -0.55
PKNOX1-202ENST00000418336 COX8AP10176 69 aa11.6□□□□□ -0.55
PKNOX1-202ENST00000418336 SMIM29Q86T20 159 aa11.6□□□□□ -0.55
PKNOX1-202ENST00000418336 A4D1N5 150 aa11.59□□□□□ -0.55
PKNOX1-202ENST00000418336 IGLV5-48A0A075B6I7 105 aa11.58□□□□□ -0.56
PKNOX1-202ENST00000418336 KRTAP13-3Q3SY46 172 aa11.58□□□□□ -0.56
PKNOX1-202ENST00000418336 C9orf153Q5TBE3 101 aa11.58□□□□□ -0.56
PKNOX1-202ENST00000418336 FAT4Q6V0I7 4981 aa11.58□□□□□ -0.56
PKNOX1-202ENST00000418336 DLEU1O43261 78 aa11.56□□□□□ -0.56
PKNOX1-202ENST00000418336 TEX49A0A1B0GTD5 131 aa11.53□□□□□ -0.56
PKNOX1-202ENST00000418336 SLC25A34Q6PIV7 304 aa11.52□□□□□ -0.57
PKNOX1-202ENST00000418336 DEFB105AQ8NG35 78 aa11.52□□□□□ -0.57
PKNOX1-202ENST00000418336 Q1RN00 199 aa11.51□□□□□ -0.57
PKNOX1-202ENST00000418336 CDIP1Q9H305 208 aa11.51□□□□□ -0.57
PKNOX1-202ENST00000418336 LAMTOR3Q9UHA4 124 aa11.51□□□□□ -0.57
PKNOX1-202ENST00000418336 SLC25A20O43772 301 aa11.5□□□□□ -0.57
PKNOX1-202ENST00000418336 TAL2Q16559 108 aa11.5□□□□□ -0.57
PKNOX1-202ENST00000418336 C2orf91Q6ZV80 131 aa11.49□□□□□ -0.57
PKNOX1-202ENST00000418336 C14orf144Q96I85 54 aa11.49□□□□□ -0.57
PKNOX1-202ENST00000418336 LINC00575Q6W349 94 aa11.48□□□□□ -0.57
PKNOX1-202ENST00000418336 PAM16Q9Y3D7 125 aa11.48□□□□□ -0.57
PKNOX1-202ENST00000418336 SPATA45Q537H7 98 aa11.47□□□□□ -0.57
PKNOX1-202ENST00000418336 HIST1H4GQ99525 98 aa11.47□□□□□ -0.57
PKNOX1-202ENST00000418336 C12orf57Q99622 126 aa11.47□□□□□ -0.57
PKNOX1-202ENST00000418336 HIGD1BQ9P298 99 aa11.46□□□□□ -0.57
PKNOX1-202ENST00000418336 A0A0G2JQZ4 141 aa11.44□□□□□ -0.58
PKNOX1-202ENST00000418336 CFC1BP0CG36 223 aa11.44□□□□□ -0.58
PKNOX1-202ENST00000418336 CFC1P0CG37 223 aa11.44□□□□□ -0.58
PKNOX1-202ENST00000418336 NHP2Q9NX24 153 aaKnown RBP11.44□□□□□ -0.58
PKNOX1-202ENST00000418336 CD164Q04900 197 aa11.43□□□□□ -0.58
PKNOX1-202ENST00000418336 HRCT1Q6UXD1 115 aa11.43□□□□□ -0.58
PKNOX1-202ENST00000418336 PRO1933Q9H354 126 aa11.42□□□□□ -0.58
PKNOX1-202ENST00000418336 VAMP8Q9BV40 100 aa11.41□□□□□ -0.58
PKNOX1-202ENST00000418336 PYY3Q5JQD4 70 aa11.4□□□□□ -0.58
PKNOX1-202ENST00000418336 hADV29S1A0JD25 119 aa11.39□□□□□ -0.59
PKNOX1-202ENST00000418336 VAMP3Q15836 100 aa11.39□□□□□ -0.59
PKNOX1-202ENST00000418336 Q5XG85 94 aa11.39□□□□□ -0.59
PKNOX1-202ENST00000418336 Q6ZQY7 126 aa11.38□□□□□ -0.59
PKNOX1-202ENST00000418336 ASB16-AS1Q495Z4 193 aa11.37□□□□□ -0.59
PKNOX1-202ENST00000418336 LIMD2Q9BT23 127 aa11.37□□□□□ -0.59
PKNOX1-202ENST00000418336 A0A0B4J2C4 111 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 225 ms