RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 SDIM1Q6ZPB5 146 aa3.69□□□□□ -1.82
NIFKP3-201ENST00000417799 C2orf91Q6ZV80 131 aa3.69□□□□□ -1.82
NIFKP3-201ENST00000417799 Q6ZVH6 145 aa3.69□□□□□ -1.82
NIFKP3-201ENST00000417799 SPANXDQ9BXN6 97 aa3.69□□□□□ -1.82
NIFKP3-201ENST00000417799 KRTAP4-4Q9BYR3 166 aa3.69□□□□□ -1.82
NIFKP3-201ENST00000417799 SPANXB1Q9NS25 103 aaPredicted RBP3.69□□□□□ -1.82
NIFKP3-201ENST00000417799 SPANXCQ9NY87 97 aa3.69□□□□□ -1.82
NIFKP3-201ENST00000417799 FRAS1Q86XX4 4008 aa3.68□□□□□ -1.82
NIFKP3-201ENST00000417799 LOC107984156A0A0G2JMH3 177 aa3.68□□□□□ -1.82
NIFKP3-201ENST00000417799 IFITM1P13164 125 aa3.68□□□□□ -1.82
NIFKP3-201ENST00000417799 TAL2Q16559 108 aa3.68□□□□□ -1.82
NIFKP3-201ENST00000417799 C9orf129Q5T035 196 aaKnown RBP3.68□□□□□ -1.82
NIFKP3-201ENST00000417799 ARL17AQ8IVW1 177 aa3.68□□□□□ -1.82
NIFKP3-201ENST00000417799 LINC00308Q8TCZ7 52 aa3.68□□□□□ -1.82
NIFKP3-201ENST00000417799 COPS9Q8WXC6 57 aa3.68□□□□□ -1.82
NIFKP3-201ENST00000417799 HIST1H4GQ99525 98 aa3.68□□□□□ -1.82
NIFKP3-201ENST00000417799 SND1-IT1Q9HBX3 110 aa3.68□□□□□ -1.82
NIFKP3-201ENST00000417799 XAGE1AQ9HD64 81 aa3.68□□□□□ -1.82
NIFKP3-201ENST00000417799 A0A096LNI7 61 aa3.67□□□□□ -1.82
NIFKP3-201ENST00000417799 IGKV2-24A0A0C4DH68 120 aa3.67□□□□□ -1.82
NIFKP3-201ENST00000417799 DDTP30046 118 aa3.67□□□□□ -1.82
NIFKP3-201ENST00000417799 NPC2P61916 151 aa3.67□□□□□ -1.82
NIFKP3-201ENST00000417799 MUSTN1Q8IVN3 82 aa3.67□□□□□ -1.82
NIFKP3-201ENST00000417799 LINC00474Q9P2X8 69 aa3.67□□□□□ -1.82
NIFKP3-201ENST00000417799 HECTD4Q9Y4D8 3996 aa3.66□□□□□ -1.82
NIFKP3-201ENST00000417799 A0A1B0GWB2 263 aa3.66□□□□□ -1.82
NIFKP3-201ENST00000417799 KRTAP10-1P60331 282 aa3.66□□□□□ -1.82
NIFKP3-201ENST00000417799 CTAG1AP78358 180 aa3.66□□□□□ -1.82
NIFKP3-201ENST00000417799 HSD52Q0P140 79 aa3.66□□□□□ -1.82
NIFKP3-201ENST00000417799 SOSTDC1Q6X4U4 206 aa3.66□□□□□ -1.82
NIFKP3-201ENST00000417799 CEND1Q8N111 149 aa3.66□□□□□ -1.82
NIFKP3-201ENST00000417799 DPH3Q96FX2 82 aa3.66□□□□□ -1.82
NIFKP3-201ENST00000417799 FAT2Q9NYQ8 4349 aa3.66□□□□□ -1.82
NIFKP3-201ENST00000417799 PANO1I0J062 215 aa3.65□□□□□ -1.83
NIFKP3-201ENST00000417799 CHTF8P0CG12 524 aa3.65□□□□□ -1.83
NIFKP3-201ENST00000417799 KRTAP10-5P60370 271 aa3.65□□□□□ -1.83
NIFKP3-201ENST00000417799 SPACA4Q8TDM5 124 aa3.65□□□□□ -1.83
NIFKP3-201ENST00000417799 RYR3Q15413 4870 aa3.64□□□□□ -1.83
NIFKP3-201ENST00000417799 DNAH11Q96DT5 4516 aa3.64□□□□□ -1.83
NIFKP3-201ENST00000417799 A0A1W2PNN7 141 aa3.64□□□□□ -1.83
NIFKP3-201ENST00000417799 PCP4L1A6NKN8 68 aa3.64□□□□□ -1.83
NIFKP3-201ENST00000417799 M0R143 59 aa3.64□□□□□ -1.83
NIFKP3-201ENST00000417799 NDUFC2O95298 119 aa3.64□□□□□ -1.83
NIFKP3-201ENST00000417799 FXYD2P54710 66 aa3.64□□□□□ -1.83
NIFKP3-201ENST00000417799 PRR3P79522 188 aaKnown RBP3.64□□□□□ -1.83
NIFKP3-201ENST00000417799 BVES-AS1Q5T3Y7 98 aa3.64□□□□□ -1.83
NIFKP3-201ENST00000417799 Q8NDZ9 215 aa3.64□□□□□ -1.83
NIFKP3-201ENST00000417799 TRBV10-2A0A0K0K1G8 114 aa3.63□□□□□ -1.83
NIFKP3-201ENST00000417799 NCR3O14931 201 aa3.63□□□□□ -1.83
NIFKP3-201ENST00000417799 HINT1P49773 126 aaPredicted RBP3.63□□□□□ -1.83
NIFKP3-201ENST00000417799 Q6ZSA8 131 aa3.63□□□□□ -1.83
NIFKP3-201ENST00000417799 FAM19A5Q7Z5A7 132 aaPredicted RBP3.63□□□□□ -1.83
NIFKP3-201ENST00000417799 NKAPP1Q8N9T2 125 aa3.63□□□□□ -1.83
NIFKP3-201ENST00000417799 PLAC8Q9NZF1 115 aa3.63□□□□□ -1.83
NIFKP3-201ENST00000417799 C22orf24Q9Y442 160 aa3.63□□□□□ -1.83
NIFKP3-201ENST00000417799 PKD1P98161 4303 aa3.63□□□□□ -1.83
NIFKP3-201ENST00000417799 IGKV2-28A0A075B6P5 120 aa3.62□□□□□ -1.83
NIFKP3-201ENST00000417799 M0R378 163 aa3.62□□□□□ -1.83
NIFKP3-201ENST00000417799 IGKV2D-28P01615 120 aa3.62□□□□□ -1.83
NIFKP3-201ENST00000417799 KRTAP1-4P0C5Y4 121 aa3.62□□□□□ -1.83
NIFKP3-201ENST00000417799 LINC00337Q8N6G1 96 aa3.62□□□□□ -1.83
NIFKP3-201ENST00000417799 C7orf33Q8WU49 177 aa3.62□□□□□ -1.83
NIFKP3-201ENST00000417799 DNAH5Q8TE73 4624 aa3.61□□□□□ -1.83
NIFKP3-201ENST00000417799 TRAV13-2A0A0B4J235 113 aa3.61□□□□□ -1.83
NIFKP3-201ENST00000417799 A0A0B4J2C4 111 aa3.61□□□□□ -1.83
NIFKP3-201ENST00000417799 A6NDN8 102 aa3.61□□□□□ -1.83
NIFKP3-201ENST00000417799 M0QXV9 152 aa3.61□□□□□ -1.83
NIFKP3-201ENST00000417799 S100A7L2Q5SY68 101 aa3.61□□□□□ -1.83
NIFKP3-201ENST00000417799 MRPL55Q7Z7F7 128 aaKnown RBP3.61□□□□□ -1.83
NIFKP3-201ENST00000417799 OR13C6PQ8NH95 151 aa3.61□□□□□ -1.83
NIFKP3-201ENST00000417799 CIRBP-AS1Q8TBR5 109 aa3.61□□□□□ -1.83
NIFKP3-201ENST00000417799 RAB37Q96AX2 223 aa3.61□□□□□ -1.83
NIFKP3-201ENST00000417799 LINC00167Q96N53 147 aa3.61□□□□□ -1.83
NIFKP3-201ENST00000417799 NHP2Q9NX24 153 aaKnown RBP3.61□□□□□ -1.83
NIFKP3-201ENST00000417799 IGLV1-50A0A075B6I6 118 aa3.6□□□□□ -1.83
NIFKP3-201ENST00000417799 TRBV10-3A0A0K0K1G6 114 aa3.6□□□□□ -1.83
NIFKP3-201ENST00000417799 IGLV6-57P01721 117 aa3.6□□□□□ -1.83
NIFKP3-201ENST00000417799 BATFQ16520 125 aa3.6□□□□□ -1.83
NIFKP3-201ENST00000417799 SCXQ7RTU7 201 aa3.6□□□□□ -1.83
NIFKP3-201ENST00000417799 PHF5AQ7RTV0 110 aaKnown RBP3.6□□□□□ -1.83
NIFKP3-201ENST00000417799 SNHG12Q9BXW3 62 aa3.6□□□□□ -1.83
NIFKP3-201ENST00000417799 TMEM126AQ9H061 195 aa3.6□□□□□ -1.83
NIFKP3-201ENST00000417799 PRO1854Q9UHT4 67 aa3.6□□□□□ -1.83
NIFKP3-201ENST00000417799 K7ERJ3 54 aa3.59□□□□□ -1.83
NIFKP3-201ENST00000417799 RPL13AP40429 203 aaKnown RBP3.59□□□□□ -1.83
NIFKP3-201ENST00000417799 UBE2BP63146 152 aa3.59□□□□□ -1.83
NIFKP3-201ENST00000417799 HAMPP81172 84 aa3.59□□□□□ -1.83
NIFKP3-201ENST00000417799 KCNQ1DNQ9H478 68 aa3.59□□□□□ -1.83
NIFKP3-201ENST00000417799 DNAH8Q96JB1 4490 aa3.58□□□□□ -1.84
NIFKP3-201ENST00000417799 A8MU10 97 aa3.58□□□□□ -1.84
NIFKP3-201ENST00000417799 CBY1Q9Y3M2 126 aa3.58□□□□□ -1.84
NIFKP3-201ENST00000417799 DYNC1H1Q14204 4646 aaKnown RBP3.58□□□□□ -1.84
NIFKP3-201ENST00000417799 TRAV23DV6A0A075B6W5 121 aa3.57□□□□□ -1.84
NIFKP3-201ENST00000417799 H7C2G1 150 aa3.57□□□□□ -1.84
NIFKP3-201ENST00000417799 ZNF73O43830 326 aaPredicted RBP3.57□□□□□ -1.84
NIFKP3-201ENST00000417799 KRTAP11-1Q8IUC1 163 aa3.57□□□□□ -1.84
NIFKP3-201ENST00000417799 SMIM11BQ8TCY0 68 aa3.57□□□□□ -1.84
NIFKP3-201ENST00000417799 LRP1BQ9NZR2 4599 aa3.57□□□□□ -1.84
NIFKP3-201ENST00000417799 PKHD1P08F94 4074 aa3.56□□□□□ -1.84
NIFKP3-201ENST00000417799 TSPAN13O95857 204 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms