RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 TRGV2A0A075B6R0 118 aa2.22□□□□□ -2.05
HMGB3P23-201ENST00000414981 LCE6AA0A183 80 aa2.22□□□□□ -2.05
HMGB3P23-201ENST00000414981 F8WEM9 126 aa2.22□□□□□ -2.05
HMGB3P23-201ENST00000414981 HAMPP81172 84 aa2.22□□□□□ -2.05
HMGB3P23-201ENST00000414981 NREPQ16612 68 aa2.22□□□□□ -2.05
HMGB3P23-201ENST00000414981 FAM229BQ4G0N7 80 aa2.22□□□□□ -2.05
HMGB3P23-201ENST00000414981 Q6ZTI0 123 aa2.22□□□□□ -2.05
HMGB3P23-201ENST00000414981 RETNLBQ9BQ08 111 aa2.22□□□□□ -2.05
HMGB3P23-201ENST00000414981 CACNA1HO95180 2353 aa2.22□□□□□ -2.05
HMGB3P23-201ENST00000414981 CEP250Q9BV73 2442 aa2.21□□□□□ -2.06
HMGB3P23-201ENST00000414981 IGKV2D-24A0A075B6R9 120 aa2.21□□□□□ -2.06
HMGB3P23-201ENST00000414981 A8MUU9 505 aa2.21□□□□□ -2.06
HMGB3P23-201ENST00000414981 NDUFB1O75438 58 aa2.21□□□□□ -2.06
HMGB3P23-201ENST00000414981 ELOF1P60002 83 aaKnown RBP2.21□□□□□ -2.06
HMGB3P23-201ENST00000414981 Q1T7F1 81 aa2.21□□□□□ -2.06
HMGB3P23-201ENST00000414981 RP1L1Q8IWN7 2480 aaPredicted RBP2.21□□□□□ -2.06
HMGB3P23-201ENST00000414981 C1orf64Q8NEQ6 169 aa2.21□□□□□ -2.06
HMGB3P23-201ENST00000414981 NOP10Q9NPE3 64 aaKnown RBP2.21□□□□□ -2.06
HMGB3P23-201ENST00000414981 PRO0255Q9UI72 69 aa2.21□□□□□ -2.06
HMGB3P23-201ENST00000414981 PRUNE2Q8WUY3 3088 aa2.21□□□□□ -2.06
HMGB3P23-201ENST00000414981 ACACAQ13085 2346 aa2.2□□□□□ -2.06
HMGB3P23-201ENST00000414981 SPTBN2O15020 2390 aa2.2□□□□□ -2.06
HMGB3P23-201ENST00000414981 TRIOBPQ9H2D6 2365 aa2.2□□□□□ -2.06
HMGB3P23-201ENST00000414981 MED13LQ71F56 2210 aa2.2□□□□□ -2.06
HMGB3P23-201ENST00000414981 TRAV10A0A0B4J240 114 aa2.2□□□□□ -2.06
HMGB3P23-201ENST00000414981 H3BPC8 53 aa2.2□□□□□ -2.06
HMGB3P23-201ENST00000414981 Q6ZQY7 126 aa2.2□□□□□ -2.06
HMGB3P23-201ENST00000414981 CYP4F30PQ9H0H9 118 aa2.2□□□□□ -2.06
HMGB3P23-201ENST00000414981 LINC00474Q9P2X8 69 aa2.2□□□□□ -2.06
HMGB3P23-201ENST00000414981 MAP1BP46821 2468 aaKnown RBP2.2□□□□□ -2.06
HMGB3P23-201ENST00000414981 DSPP15924 2871 aaKnown RBP2.2□□□□□ -2.06
HMGB3P23-201ENST00000414981 NCOR1O75376 2440 aa2.19□□□□□ -2.06
HMGB3P23-201ENST00000414981 COL6A6A6NMZ7 2263 aa2.19□□□□□ -2.06
HMGB3P23-201ENST00000414981 IGLV5-48A0A075B6I7 105 aa2.19□□□□□ -2.06
HMGB3P23-201ENST00000414981 IGKV4-1P06312 121 aa2.19□□□□□ -2.06
HMGB3P23-201ENST00000414981 ROMO1P60602 79 aa2.19□□□□□ -2.06
HMGB3P23-201ENST00000414981 ASB16-AS1Q495Z4 193 aa2.19□□□□□ -2.06
HMGB3P23-201ENST00000414981 C10orf99Q6UWK7 81 aa2.19□□□□□ -2.06
HMGB3P23-201ENST00000414981 WFDC9Q8NEX5 89 aa2.19□□□□□ -2.06
HMGB3P23-201ENST00000414981 CELSR3Q9NYQ7 3312 aa2.19□□□□□ -2.06
HMGB3P23-201ENST00000414981 EP300Q09472 2414 aaPredicted RBP2.19□□□□□ -2.06
HMGB3P23-201ENST00000414981 hDV103S1A0JD37 113 aa2.18□□□□□ -2.06
HMGB3P23-201ENST00000414981 SPAG11BQ08648 103 aa2.18□□□□□ -2.06
HMGB3P23-201ENST00000414981 LELP1Q5T871 98 aa2.18□□□□□ -2.06
HMGB3P23-201ENST00000414981 SNURFQ9Y675 71 aa2.18□□□□□ -2.06
HMGB3P23-201ENST00000414981 MYO15AQ9UKN7 3530 aa2.18□□□□□ -2.06
HMGB3P23-201ENST00000414981 KALRNO60229 2985 aa2.18□□□□□ -2.06
HMGB3P23-201ENST00000414981 IGKV3OR2-268A0A0C4DH90 116 aa2.17□□□□□ -2.06
HMGB3P23-201ENST00000414981 ETDCA0A1B0GVM5 59 aa2.17□□□□□ -2.06
HMGB3P23-201ENST00000414981 H3BNG1 76 aa2.17□□□□□ -2.06
HMGB3P23-201ENST00000414981 C1orf134Q5TEV5 83 aa2.17□□□□□ -2.06
HMGB3P23-201ENST00000414981 LINC00269Q8N2A0 174 aa2.17□□□□□ -2.06
HMGB3P23-201ENST00000414981 SPANXA2-OT1Q8N9U9 137 aa2.17□□□□□ -2.06
HMGB3P23-201ENST00000414981 ZCCHC13Q8WW36 166 aaKnown RBP2.17□□□□□ -2.06
HMGB3P23-201ENST00000414981 SPRR4Q96PI1 79 aa2.17□□□□□ -2.06
HMGB3P23-201ENST00000414981 SPTBN1Q01082 2364 aaKnown RBP2.17□□□□□ -2.06
HMGB3P23-201ENST00000414981 PIEZO2Q9H5I5 2752 aa2.17□□□□□ -2.06
HMGB3P23-201ENST00000414981 EYSQ5T1H1 3165 aa2.16□□□□□ -2.06
HMGB3P23-201ENST00000414981 CFAP47Q6ZTR5 3102 aa2.16□□□□□ -2.06
HMGB3P23-201ENST00000414981 ADGRG4Q8IZF6 3080 aa2.16□□□□□ -2.06
HMGB3P23-201ENST00000414981 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.16□□□□□ -2.06
HMGB3P23-201ENST00000414981 ANGP03950 147 aaKnown RBP2.16□□□□□ -2.06
HMGB3P23-201ENST00000414981 DEFB136Q30KP8 78 aa2.16□□□□□ -2.06
HMGB3P23-201ENST00000414981 LIMD2Q9BT23 127 aa2.16□□□□□ -2.06
HMGB3P23-201ENST00000414981 KCNQ1DNQ9H478 68 aa2.16□□□□□ -2.06
HMGB3P23-201ENST00000414981 PRRC2CQ9Y520 2896 aaKnown RBP2.16□□□□□ -2.06
HMGB3P23-201ENST00000414981 PTPRZ1P23471 2315 aaPredicted RBP2.16□□□□□ -2.06
HMGB3P23-201ENST00000414981 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.16□□□□□ -2.06
HMGB3P23-201ENST00000414981 SORL1Q92673 2214 aa2.15□□□□□ -2.06
HMGB3P23-201ENST00000414981 LOC400499M0QZD8 3231 aa2.15□□□□□ -2.07
HMGB3P23-201ENST00000414981 ABCA2Q9BZC7 2435 aa2.15□□□□□ -2.07
HMGB3P23-201ENST00000414981 HCG22E2RYF7 251 aa2.15□□□□□ -2.07
HMGB3P23-201ENST00000414981 M0R2N4 97 aa2.15□□□□□ -2.07
HMGB3P23-201ENST00000414981 KPRPQ5T749 579 aaPredicted RBP2.15□□□□□ -2.07
HMGB3P23-201ENST00000414981 UNQ6190/PRO20217Q6UXQ8 127 aa2.15□□□□□ -2.07
HMGB3P23-201ENST00000414981 Q9BRP9 147 aa2.15□□□□□ -2.07
HMGB3P23-201ENST00000414981 PTPRQQ9UMZ3 2332 aa2.15□□□□□ -2.07
HMGB3P23-201ENST00000414981 C16orf90A8MZG2 172 aa2.14□□□□□ -2.07
HMGB3P23-201ENST00000414981 DEFB130BP0DP73 79 aa2.14□□□□□ -2.07
HMGB3P23-201ENST00000414981 DEFB130AP0DP74 79 aa2.14□□□□□ -2.07
HMGB3P23-201ENST00000414981 DEFB116Q30KQ4 102 aa2.14□□□□□ -2.07
HMGB3P23-201ENST00000414981 HIGD2AQ9BW72 106 aa2.14□□□□□ -2.07
HMGB3P23-201ENST00000414981 C6orf48Q9UBA6 75 aa2.14□□□□□ -2.07
HMGB3P23-201ENST00000414981 DMXL2Q8TDJ6 3036 aa2.14□□□□□ -2.07
HMGB3P23-201ENST00000414981 WDFY4Q6ZS81 3184 aa2.14□□□□□ -2.07
HMGB3P23-201ENST00000414981 CREBBPQ92793 2442 aa2.13□□□□□ -2.07
HMGB3P23-201ENST00000414981 PSCAO43653 123 aa2.13□□□□□ -2.07
HMGB3P23-201ENST00000414981 P0C880 135 aa2.13□□□□□ -2.07
HMGB3P23-201ENST00000414981 SPART-AS1P0CW21 52 aa2.13□□□□□ -2.07
HMGB3P23-201ENST00000414981 SPRR1AP35321 89 aa2.13□□□□□ -2.07
HMGB3P23-201ENST00000414981 KRTAP10-10P60014 251 aa2.13□□□□□ -2.07
HMGB3P23-201ENST00000414981 DEFB113Q30KQ7 82 aa2.13□□□□□ -2.07
HMGB3P23-201ENST00000414981 C9orf116Q5BN46 136 aaPredicted RBP2.13□□□□□ -2.07
HMGB3P23-201ENST00000414981 DCHS1Q96JQ0 3298 aa2.13□□□□□ -2.07
HMGB3P23-201ENST00000414981 SPTAN1Q13813 2472 aaKnown RBP2.13□□□□□ -2.07
HMGB3P23-201ENST00000414981 TLN1Q9Y490 2541 aaKnown RBP2.13□□□□□ -2.07
HMGB3P23-201ENST00000414981 ANKRD11Q6UB99 2663 aaPredicted RBP2.12□□□□□ -2.07
HMGB3P23-201ENST00000414981 TRAV22A0A0B4J277 110 aa2.12□□□□□ -2.07
HMGB3P23-201ENST00000414981 SPRR5A0A1B0GTR4 108 aa2.12□□□□□ -2.07
HMGB3P23-201ENST00000414981 LOC101927531A0A1B0GV80 90 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms