RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 OR13C6PQ8NH95 151 aa8.81□□□□□ -1
LIMS1-206ENST00000414829 HIGD2AQ9BW72 106 aa8.81□□□□□ -1
LIMS1-206ENST00000414829 LRP1Q07954 4544 aaKnown RBP8.81□□□□□ -1
LIMS1-206ENST00000414829 KRTAP1-4P0C5Y4 121 aa8.8□□□□□ -1
LIMS1-206ENST00000414829 FAT3Q8TDW7 4589 aa8.8□□□□□ -1
LIMS1-206ENST00000414829 ZNF73O43830 326 aaPredicted RBP8.79□□□□□ -1
LIMS1-206ENST00000414829 PAM16Q9Y3D7 125 aa8.79□□□□□ -1
LIMS1-206ENST00000414829 TRAV13-2A0A0B4J235 113 aa8.78□□□□□ -1
LIMS1-206ENST00000414829 KRTAP4-16G5E9R7 235 aaPredicted RBP8.78□□□□□ -1
LIMS1-206ENST00000414829 CRYGAP11844 174 aa8.78□□□□□ -1
LIMS1-206ENST00000414829 KRTAP10-8P60410 259 aa8.78□□□□□ -1
LIMS1-206ENST00000414829 FAM229BQ4G0N7 80 aa8.78□□□□□ -1
LIMS1-206ENST00000414829 SPATA45Q537H7 98 aa8.78□□□□□ -1
LIMS1-206ENST00000414829 Q6ZRX8 168 aa8.78□□□□□ -1
LIMS1-206ENST00000414829 MUSTN1Q8IVN3 82 aa8.77□□□□□ -1.01
LIMS1-206ENST00000414829 B5MCH6 92 aa8.76□□□□□ -1.01
LIMS1-206ENST00000414829 SLC25A34Q6PIV7 304 aa8.76□□□□□ -1.01
LIMS1-206ENST00000414829 PRR26Q8N8Z3 221 aa8.76□□□□□ -1.01
LIMS1-206ENST00000414829 HIST1H4GQ99525 98 aa8.75□□□□□ -1.01
LIMS1-206ENST00000414829 A6NDN8 102 aa8.74□□□□□ -1.01
LIMS1-206ENST00000414829 HIGD1BQ9P298 99 aa8.73□□□□□ -1.01
LIMS1-206ENST00000414829 HERC1Q15751 4861 aa8.73□□□□□ -1.01
LIMS1-206ENST00000414829 TRBV7-6A0A0J9YX20 115 aa8.72□□□□□ -1.01
LIMS1-206ENST00000414829 PYY3Q5JQD4 70 aa8.72□□□□□ -1.01
LIMS1-206ENST00000414829 C14orf144Q96I85 54 aa8.72□□□□□ -1.01
LIMS1-206ENST00000414829 DHRS4-AS1Q9P1J3 65 aa8.72□□□□□ -1.01
LIMS1-206ENST00000414829 TYMSOSQ8TAI1 123 aa8.71□□□□□ -1.02
LIMS1-206ENST00000414829 SMCR5Q8TEV8 140 aa8.71□□□□□ -1.02
LIMS1-206ENST00000414829 SPRR4Q96PI1 79 aa8.71□□□□□ -1.02
LIMS1-206ENST00000414829 A4D1N5 150 aa8.7□□□□□ -1.02
LIMS1-206ENST00000414829 C6orf99Q4VX62 202 aa8.7□□□□□ -1.02
LIMS1-206ENST00000414829 A0A1B0GWB2 263 aa8.69□□□□□ -1.02
LIMS1-206ENST00000414829 COX7BP24311 80 aa8.69□□□□□ -1.02
LIMS1-206ENST00000414829 ELOF1P60002 83 aaKnown RBP8.69□□□□□ -1.02
LIMS1-206ENST00000414829 TNXBP22105 4242 aa8.69□□□□□ -1.02
LIMS1-206ENST00000414829 A0A087X002 238 aa8.68□□□□□ -1.02
LIMS1-206ENST00000414829 TMEM238LA0A1B0GVL6 79 aa8.68□□□□□ -1.02
LIMS1-206ENST00000414829 A6NJY4 79 aa8.68□□□□□ -1.02
LIMS1-206ENST00000414829 TAL2Q16559 108 aa8.68□□□□□ -1.02
LIMS1-206ENST00000414829 Q9BRP9 147 aa8.68□□□□□ -1.02
LIMS1-206ENST00000414829 LINC00483Q53H64 154 aa8.67□□□□□ -1.02
LIMS1-206ENST00000414829 NHP2Q9NX24 153 aaKnown RBP8.67□□□□□ -1.02
LIMS1-206ENST00000414829 CTAG1AP78358 180 aa8.66□□□□□ -1.02
LIMS1-206ENST00000414829 VAMP3Q15836 100 aa8.66□□□□□ -1.02
LIMS1-206ENST00000414829 ANAPC11Q9NYG5 84 aa8.65□□□□□ -1.02
LIMS1-206ENST00000414829 GAGE2AQ6NT46 116 aa8.64□□□□□ -1.03
LIMS1-206ENST00000414829 C2orf91Q6ZV80 131 aa8.64□□□□□ -1.03
LIMS1-206ENST00000414829 SMIM11BQ8TCY0 68 aa8.64□□□□□ -1.03
LIMS1-206ENST00000414829 SLC25A20O43772 301 aa8.63□□□□□ -1.03
LIMS1-206ENST00000414829 ERC2-IT1O76042 136 aa8.63□□□□□ -1.03
LIMS1-206ENST00000414829 A0A0B4J2C4 111 aa8.62□□□□□ -1.03
LIMS1-206ENST00000414829 KRTAP13-2Q52LG2 175 aa8.62□□□□□ -1.03
LIMS1-206ENST00000414829 RAB37Q96AX2 223 aa8.62□□□□□ -1.03
LIMS1-206ENST00000414829 UQCR10Q9UDW1 63 aa8.62□□□□□ -1.03
LIMS1-206ENST00000414829 HSD52Q0P140 79 aa8.61□□□□□ -1.03
LIMS1-206ENST00000414829 BVES-AS1Q5T3Y7 98 aa8.61□□□□□ -1.03
LIMS1-206ENST00000414829 CEND1Q8N111 149 aa8.61□□□□□ -1.03
LIMS1-206ENST00000414829 LINC00304Q8N9R0 145 aa8.61□□□□□ -1.03
LIMS1-206ENST00000414829 SMIM6P0DI80 62 aa8.6□□□□□ -1.03
LIMS1-206ENST00000414829 SPAG11AQ6PDA7 123 aa8.6□□□□□ -1.03
LIMS1-206ENST00000414829 C12orf57Q99622 126 aa8.6□□□□□ -1.03
LIMS1-206ENST00000414829 SNCGO76070 127 aa8.58□□□□□ -1.04
LIMS1-206ENST00000414829 C4orf48Q5BLP8 95 aa8.58□□□□□ -1.04
LIMS1-206ENST00000414829 CFC1BP0CG36 223 aa8.57□□□□□ -1.04
LIMS1-206ENST00000414829 CFC1P0CG37 223 aa8.57□□□□□ -1.04
LIMS1-206ENST00000414829 SPRR1BP22528 89 aa8.57□□□□□ -1.04
LIMS1-206ENST00000414829 C3orf22Q8N5N4 141 aa8.57□□□□□ -1.04
LIMS1-206ENST00000414829 SSBP3-AS1Q7Z2R9 100 aa8.56□□□□□ -1.04
LIMS1-206ENST00000414829 LAMTOR3Q9UHA4 124 aa8.56□□□□□ -1.04
LIMS1-206ENST00000414829 IGLV9-49A0A0B4J1Y8 123 aa8.55□□□□□ -1.04
LIMS1-206ENST00000414829 TEX49A0A1B0GTD5 131 aa8.55□□□□□ -1.04
LIMS1-206ENST00000414829 MOBPQ13875 183 aa8.55□□□□□ -1.04
LIMS1-206ENST00000414829 ST20-AS1Q8NBB2 130 aa8.55□□□□□ -1.04
LIMS1-206ENST00000414829 Q8NBF4 154 aa8.55□□□□□ -1.04
LIMS1-206ENST00000414829 Q1RN00 199 aa8.54□□□□□ -1.04
LIMS1-206ENST00000414829 C9orf153Q5TBE3 101 aa8.54□□□□□ -1.04
LIMS1-206ENST00000414829 PRO1854Q9UHT4 67 aa8.54□□□□□ -1.04
LIMS1-206ENST00000414829 H7C2G1 150 aa8.53□□□□□ -1.04
LIMS1-206ENST00000414829 LINC00575Q6W349 94 aa8.53□□□□□ -1.04
LIMS1-206ENST00000414829 HMCN2Q8NDA2 5059 aa8.52□□□□□ -1.05
LIMS1-206ENST00000414829 IGLV5-48A0A075B6I7 105 aa8.52□□□□□ -1.05
LIMS1-206ENST00000414829 hADV29S1A0JD25 119 aa8.52□□□□□ -1.05
LIMS1-206ENST00000414829 H0YGX0 51 aa8.52□□□□□ -1.05
LIMS1-206ENST00000414829 TSPAN13O95857 204 aa8.52□□□□□ -1.05
LIMS1-206ENST00000414829 SPINK1P00995 79 aa8.52□□□□□ -1.05
LIMS1-206ENST00000414829 FXYD2P54710 66 aa8.52□□□□□ -1.05
LIMS1-206ENST00000414829 RPS29P62273 56 aaKnown RBP8.5□□□□□ -1.05
LIMS1-206ENST00000414829 DEFB105AQ8NG35 78 aa8.5□□□□□ -1.05
LIMS1-206ENST00000414829 GHRHP01286 108 aa8.49□□□□□ -1.05
LIMS1-206ENST00000414829 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.49□□□□□ -1.05
LIMS1-206ENST00000414829 PPDPFLQ8WWR9 84 aa8.49□□□□□ -1.05
LIMS1-206ENST00000414829 A0A1B0GX51 115 aa8.47□□□□□ -1.05
LIMS1-206ENST00000414829 F8WEM9 126 aa8.47□□□□□ -1.05
LIMS1-206ENST00000414829 TSTD3H0UI37 97 aa8.47□□□□□ -1.05
LIMS1-206ENST00000414829 M0R143 59 aa8.47□□□□□ -1.05
LIMS1-206ENST00000414829 PRR4Q16378 134 aa8.47□□□□□ -1.05
LIMS1-206ENST00000414829 Q6ZQY7 126 aa8.47□□□□□ -1.05
LIMS1-206ENST00000414829 COX6CP09669 75 aa8.46□□□□□ -1.06
LIMS1-206ENST00000414829 OCIAD2Q56VL3 154 aa8.46□□□□□ -1.06
LIMS1-206ENST00000414829 PRO1933Q9H354 126 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms