RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 CRYGAP11844 174 aa5.97□□□□□ -1.45
TMEM248-202ENST00000413593 LINC00337Q8N6G1 96 aa5.97□□□□□ -1.45
TMEM248-202ENST00000413593 LINC00308Q8TCZ7 52 aa5.97□□□□□ -1.45
TMEM248-202ENST00000413593 HIGD2AQ9BW72 106 aa5.97□□□□□ -1.45
TMEM248-202ENST00000413593 ANAPC11Q9NYG5 84 aa5.97□□□□□ -1.45
TMEM248-202ENST00000413593 IGLV6-57P01721 117 aa5.96□□□□□ -1.46
TMEM248-202ENST00000413593 SNRPEP62304 92 aaKnown RBP5.96□□□□□ -1.46
TMEM248-202ENST00000413593 S100A12P80511 92 aa5.96□□□□□ -1.46
TMEM248-202ENST00000413593 ETDCA0A1B0GVM5 59 aa5.95□□□□□ -1.46
TMEM248-202ENST00000413593 FAM229BQ4G0N7 80 aa5.95□□□□□ -1.46
TMEM248-202ENST00000413593 S100A7L2Q5SY68 101 aa5.95□□□□□ -1.46
TMEM248-202ENST00000413593 SCGB1D4Q6XE38 83 aa5.95□□□□□ -1.46
TMEM248-202ENST00000413593 PCP2Q8IVA1 136 aa5.95□□□□□ -1.46
TMEM248-202ENST00000413593 SPANXCQ9NY87 97 aa5.95□□□□□ -1.46
TMEM248-202ENST00000413593 C5orf52A6NGY3 159 aa5.94□□□□□ -1.46
TMEM248-202ENST00000413593 KRTAP13-2Q52LG2 175 aa5.94□□□□□ -1.46
TMEM248-202ENST00000413593 TRAV23DV6A0A075B6W5 121 aa5.93□□□□□ -1.46
TMEM248-202ENST00000413593 B5MCH6 92 aa5.93□□□□□ -1.46
TMEM248-202ENST00000413593 TYMSOSQ8TAI1 123 aa5.93□□□□□ -1.46
TMEM248-202ENST00000413593 SMCR5Q8TEV8 140 aa5.93□□□□□ -1.46
TMEM248-202ENST00000413593 SPRR4Q96PI1 79 aa5.93□□□□□ -1.46
TMEM248-202ENST00000413593 SPANXDQ9BXN6 97 aa5.93□□□□□ -1.46
TMEM248-202ENST00000413593 HSBP1L1C9JCN9 74 aa5.91□□□□□ -1.46
TMEM248-202ENST00000413593 ZNF73O43830 326 aaPredicted RBP5.91□□□□□ -1.46
TMEM248-202ENST00000413593 Q6ZRX8 168 aa5.91□□□□□ -1.46
TMEM248-202ENST00000413593 PPDPFQ9H3Y8 114 aa5.91□□□□□ -1.46
TMEM248-202ENST00000413593 ZNF706Q9Y5V0 76 aaPredicted RBP5.91□□□□□ -1.46
TMEM248-202ENST00000413593 UBR4Q5T4S7 5183 aa5.91□□□□□ -1.46
TMEM248-202ENST00000413593 IFITM1P13164 125 aa5.9□□□□□ -1.46
TMEM248-202ENST00000413593 Q6ZVH6 145 aa5.9□□□□□ -1.46
TMEM248-202ENST00000413593 LINC00518Q8N0U6 118 aa5.9□□□□□ -1.46
TMEM248-202ENST00000413593 OR13C6PQ8NH95 151 aa5.9□□□□□ -1.46
TMEM248-202ENST00000413593 Q9BRP9 147 aa5.9□□□□□ -1.46
TMEM248-202ENST00000413593 CBY1Q9Y3M2 126 aa5.9□□□□□ -1.46
TMEM248-202ENST00000413593 ERC2-IT1O76042 136 aa5.89□□□□□ -1.47
TMEM248-202ENST00000413593 SCGB1D1O95968 90 aa5.89□□□□□ -1.47
TMEM248-202ENST00000413593 COPS9Q8WXC6 57 aa5.89□□□□□ -1.47
TMEM248-202ENST00000413593 LRP2P98164 4655 aa5.88□□□□□ -1.47
TMEM248-202ENST00000413593 JOSD1Q15040 202 aaPredicted RBP5.88□□□□□ -1.47
TMEM248-202ENST00000413593 MUSTN1Q8IVN3 82 aa5.88□□□□□ -1.47
TMEM248-202ENST00000413593 C3orf22Q8N5N4 141 aa5.88□□□□□ -1.47
TMEM248-202ENST00000413593 TSPAN13O95857 204 aa5.87□□□□□ -1.47
TMEM248-202ENST00000413593 LINC00483Q53H64 154 aa5.87□□□□□ -1.47
TMEM248-202ENST00000413593 HINT1P49773 126 aaPredicted RBP5.86□□□□□ -1.47
TMEM248-202ENST00000413593 GAGE2AQ6NT46 116 aa5.86□□□□□ -1.47
TMEM248-202ENST00000413593 LINC00304Q8N9R0 145 aa5.86□□□□□ -1.47
TMEM248-202ENST00000413593 KRTAP9-2Q9BYQ4 174 aa5.86□□□□□ -1.47
TMEM248-202ENST00000413593 C6orf99Q4VX62 202 aa5.85□□□□□ -1.47
TMEM248-202ENST00000413593 ELOF1P60002 83 aaKnown RBP5.84□□□□□ -1.47
TMEM248-202ENST00000413593 KRTAP4-12Q9BQ66 201 aa5.84□□□□□ -1.47
TMEM248-202ENST00000413593 A6NDN8 102 aa5.83□□□□□ -1.48
TMEM248-202ENST00000413593 COX8AP10176 69 aa5.83□□□□□ -1.48
TMEM248-202ENST00000413593 COX7BP24311 80 aa5.83□□□□□ -1.48
TMEM248-202ENST00000413593 PRR4Q16378 134 aa5.83□□□□□ -1.48
TMEM248-202ENST00000413593 ST20-AS1Q8NBB2 130 aa5.83□□□□□ -1.48
TMEM248-202ENST00000413593 DHRS4-AS1Q9P1J3 65 aa5.83□□□□□ -1.48
TMEM248-202ENST00000413593 TRAV13-2A0A0B4J235 113 aa5.82□□□□□ -1.48
TMEM248-202ENST00000413593 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.82□□□□□ -1.48
TMEM248-202ENST00000413593 CTAG1AP78358 180 aa5.82□□□□□ -1.48
TMEM248-202ENST00000413593 TRBV7-6A0A0J9YX20 115 aa5.81□□□□□ -1.48
TMEM248-202ENST00000413593 KRTAP9-6A0A140TA67 174 aa5.81□□□□□ -1.48
TMEM248-202ENST00000413593 A4D1N5 150 aa5.81□□□□□ -1.48
TMEM248-202ENST00000413593 DLEU1O43261 78 aa5.81□□□□□ -1.48
TMEM248-202ENST00000413593 SPAG11AQ6PDA7 123 aa5.81□□□□□ -1.48
TMEM248-202ENST00000413593 Q8NBF4 154 aa5.81□□□□□ -1.48
TMEM248-202ENST00000413593 PAM16Q9Y3D7 125 aa5.81□□□□□ -1.48
TMEM248-202ENST00000413593 IGLV9-49A0A0B4J1Y8 123 aa5.8□□□□□ -1.48
TMEM248-202ENST00000413593 A0A1B0GWB2 263 aa5.8□□□□□ -1.48
TMEM248-202ENST00000413593 MOBPQ13875 183 aa5.8□□□□□ -1.48
TMEM248-202ENST00000413593 SPATA45Q537H7 98 aa5.8□□□□□ -1.48
TMEM248-202ENST00000413593 C14orf144Q96I85 54 aa5.8□□□□□ -1.48
TMEM248-202ENST00000413593 SPRR1BP22528 89 aa5.79□□□□□ -1.48
TMEM248-202ENST00000413593 SSBP3-AS1Q7Z2R9 100 aa5.79□□□□□ -1.48
TMEM248-202ENST00000413593 SMIM11BQ8TCY0 68 aa5.79□□□□□ -1.48
TMEM248-202ENST00000413593 HIST1H4GQ99525 98 aa5.79□□□□□ -1.48
TMEM248-202ENST00000413593 RETNLBQ9BQ08 111 aa5.79□□□□□ -1.48
TMEM248-202ENST00000413593 VAMP8Q9BV40 100 aa5.79□□□□□ -1.48
TMEM248-202ENST00000413593 LPAP08519 4548 aa5.77□□□□□ -1.49
TMEM248-202ENST00000413593 SLC25A34Q6PIV7 304 aa5.77□□□□□ -1.49
TMEM248-202ENST00000413593 KRTAP19-1Q8IUB9 90 aa5.77□□□□□ -1.49
TMEM248-202ENST00000413593 HIGD1BQ9P298 99 aa5.77□□□□□ -1.49
TMEM248-202ENST00000413593 TMA7Q9Y2S6 64 aaKnown RBP5.77□□□□□ -1.49
TMEM248-202ENST00000413593 SPINK1P00995 79 aa5.76□□□□□ -1.49
TMEM248-202ENST00000413593 PYY3Q5JQD4 70 aa5.76□□□□□ -1.49
TMEM248-202ENST00000413593 LCE3BQ5TA77 95 aa5.76□□□□□ -1.49
TMEM248-202ENST00000413593 C9orf153Q5TBE3 101 aa5.76□□□□□ -1.49
TMEM248-202ENST00000413593 C2orf91Q6ZV80 131 aa5.76□□□□□ -1.49
TMEM248-202ENST00000413593 C12orf57Q99622 126 aa5.76□□□□□ -1.49
TMEM248-202ENST00000413593 TEX49A0A1B0GTD5 131 aa5.74□□□□□ -1.49
TMEM248-202ENST00000413593 VAMP3Q15836 100 aa5.74□□□□□ -1.49
TMEM248-202ENST00000413593 TAL2Q16559 108 aa5.74□□□□□ -1.49
TMEM248-202ENST00000413593 DEFB105AQ8NG35 78 aa5.74□□□□□ -1.49
TMEM248-202ENST00000413593 NHP2Q9NX24 153 aaKnown RBP5.74□□□□□ -1.49
TMEM248-202ENST00000413593 LAMTOR3Q9UHA4 124 aa5.74□□□□□ -1.49
TMEM248-202ENST00000413593 IGLV5-48A0A075B6I7 105 aa5.73□□□□□ -1.49
TMEM248-202ENST00000413593 IGLV7-46A0A075B6I9 117 aa5.73□□□□□ -1.49
TMEM248-202ENST00000413593 LINC01547P58512 204 aaPredicted RBP5.73□□□□□ -1.49
TMEM248-202ENST00000413593 RPS29P62273 56 aaKnown RBP5.73□□□□□ -1.49
TMEM248-202ENST00000413593 CFC1BP0CG36 223 aa5.72□□□□□ -1.49
TMEM248-202ENST00000413593 CFC1P0CG37 223 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms