RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 DHRS4-AS1Q9P1J3 65 aa11.51□□□□□ -0.57
SDCBP-202ENST00000413219 LINC01556Q5JQF7 62 aa11.5□□□□□ -0.57
SDCBP-202ENST00000413219 C7orf33Q8WU49 177 aa11.5□□□□□ -0.57
SDCBP-202ENST00000413219 VWFP04275 2813 aa11.5□□□□□ -0.57
SDCBP-202ENST00000413219 C3orf84H3BNL1 204 aa11.5□□□□□ -0.57
SDCBP-202ENST00000413219 PLA2G2DQ9UNK4 145 aa11.5□□□□□ -0.57
SDCBP-202ENST00000413219 FUSP35637 526 aaKnown RBP eCLIP11.49□□□□□ -0.57
SDCBP-202ENST00000413219 ESRGQ1W209 222 aa11.49□□□□□ -0.57
SDCBP-202ENST00000413219 PRO0628Q9UI54 55 aa11.49□□□□□ -0.57
SDCBP-202ENST00000413219 DEFB105AQ8NG35 78 aa11.48□□□□□ -0.57
SDCBP-202ENST00000413219 IGKV2D-24A0A075B6R9 120 aa11.47□□□□□ -0.57
SDCBP-202ENST00000413219 TLX1NBP0CAT3 122 aa11.47□□□□□ -0.57
SDCBP-202ENST00000413219 SERTAD4-AS1Q5TG53 156 aa11.47□□□□□ -0.57
SDCBP-202ENST00000413219 LINC00336Q6ZUF6 198 aa11.47□□□□□ -0.57
SDCBP-202ENST00000413219 Q6ZRX8 168 aa11.46□□□□□ -0.57
SDCBP-202ENST00000413219 Q6ZTC4 211 aa11.46□□□□□ -0.57
SDCBP-202ENST00000413219 TENM4Q6N022 2769 aa11.45□□□□□ -0.58
SDCBP-202ENST00000413219 IGLV5-37A0A075B6J1 123 aa11.45□□□□□ -0.58
SDCBP-202ENST00000413219 TNP2Q05952 138 aa11.45□□□□□ -0.58
SDCBP-202ENST00000413219 KRTAP4-16G5E9R7 235 aaPredicted RBP11.44□□□□□ -0.58
SDCBP-202ENST00000413219 LINC00474Q9P2X8 69 aa11.44□□□□□ -0.58
SDCBP-202ENST00000413219 A0A1W2PNM2 257 aa11.43□□□□□ -0.58
SDCBP-202ENST00000413219 LCE6AA0A183 80 aa11.42□□□□□ -0.58
SDCBP-202ENST00000413219 SPRR1AP35321 89 aa11.42□□□□□ -0.58
SDCBP-202ENST00000413219 INAFM1C9JVW0 142 aa11.41□□□□□ -0.58
SDCBP-202ENST00000413219 C1orf137Q5JT78 98 aa11.41□□□□□ -0.58
SDCBP-202ENST00000413219 Q8NBF4 154 aa11.41□□□□□ -0.58
SDCBP-202ENST00000413219 Q9BRP9 147 aa11.41□□□□□ -0.58
SDCBP-202ENST00000413219 RETNQ9HD89 108 aa11.41□□□□□ -0.58
SDCBP-202ENST00000413219 ITPR2Q14571 2701 aa11.41□□□□□ -0.58
SDCBP-202ENST00000413219 IGLV1-50A0A075B6I6 118 aa11.4□□□□□ -0.58
SDCBP-202ENST00000413219 J3QKU1 62 aa11.4□□□□□ -0.58
SDCBP-202ENST00000413219 HIGD2AQ9BW72 106 aa11.4□□□□□ -0.58
SDCBP-202ENST00000413219 ETDCA0A1B0GVM5 59 aa11.4□□□□□ -0.58
SDCBP-202ENST00000413219 SMIM29Q86T20 159 aa11.4□□□□□ -0.58
SDCBP-202ENST00000413219 SPRR4Q96PI1 79 aa11.4□□□□□ -0.58
SDCBP-202ENST00000413219 DNAH10OSP0CZ25 163 aa11.38□□□□□ -0.59
SDCBP-202ENST00000413219 HIVEP1P15822 2718 aa11.38□□□□□ -0.59
SDCBP-202ENST00000413219 UNC79Q9P2D8 2635 aa11.36□□□□□ -0.59
SDCBP-202ENST00000413219 RPL37AP8A6NKH3 93 aa11.36□□□□□ -0.59
SDCBP-202ENST00000413219 FAM229BQ4G0N7 80 aa11.36□□□□□ -0.59
SDCBP-202ENST00000413219 NOTCH2Q04721 2471 aa11.35□□□□□ -0.59
SDCBP-202ENST00000413219 DEFB131BA0A096LNP1 70 aa11.35□□□□□ -0.59
SDCBP-202ENST00000413219 FAM30AQ9NZY2 134 aa11.35□□□□□ -0.59
SDCBP-202ENST00000413219 ST20-AS1Q8NBB2 130 aa11.33□□□□□ -0.6
SDCBP-202ENST00000413219 DSCR10P59022 87 aa11.32□□□□□ -0.6
SDCBP-202ENST00000413219 FAM168BA1KXE4 195 aa11.31□□□□□ -0.6
SDCBP-202ENST00000413219 ZCCHC13Q8WW36 166 aaKnown RBP11.31□□□□□ -0.6
SDCBP-202ENST00000413219 TENM1Q9UKZ4 2725 aa11.3□□□□□ -0.6
SDCBP-202ENST00000413219 KRTAP10-11P60412 298 aa11.3□□□□□ -0.6
SDCBP-202ENST00000413219 KRTAP7-1Q8IUC3 87 aa11.3□□□□□ -0.6
SDCBP-202ENST00000413219 C11orf45Q8TAV5 145 aa11.29□□□□□ -0.6
SDCBP-202ENST00000413219 MRPL55Q7Z7F7 128 aaKnown RBP11.29□□□□□ -0.6
SDCBP-202ENST00000413219 OXLD1Q5BKU9 147 aa11.28□□□□□ -0.6
SDCBP-202ENST00000413219 hDV103S1A0JD37 113 aa11.27□□□□□ -0.61
SDCBP-202ENST00000413219 K7EQZ3 153 aa11.27□□□□□ -0.61
SDCBP-202ENST00000413219 MPLKIPQ8TAP9 179 aa11.27□□□□□ -0.61
SDCBP-202ENST00000413219 FASNP49327 2511 aaKnown RBP11.27□□□□□ -0.61
SDCBP-202ENST00000413219 UBE2BP63146 152 aa11.26□□□□□ -0.61
SDCBP-202ENST00000413219 HCG22E2RYF7 251 aa11.24□□□□□ -0.61
SDCBP-202ENST00000413219 REG3GQ6UW15 175 aa11.24□□□□□ -0.61
SDCBP-202ENST00000413219 BRK1Q8WUW1 75 aa11.24□□□□□ -0.61
SDCBP-202ENST00000413219 LINC00476Q8WZB0 136 aa11.23□□□□□ -0.61
SDCBP-202ENST00000413219 CASC10Q5T4H9 136 aa11.23□□□□□ -0.61
SDCBP-202ENST00000413219 NSD1Q96L73 2696 aaPredicted RBP11.22□□□□□ -0.61
SDCBP-202ENST00000413219 TEP1Q99973 2627 aaKnown RBP11.21□□□□□ -0.61
SDCBP-202ENST00000413219 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.21□□□□□ -0.62
SDCBP-202ENST00000413219 LINC00588Q9Y4M8 146 aa11.21□□□□□ -0.62
SDCBP-202ENST00000413219 PSCAO43653 123 aa11.2□□□□□ -0.62
SDCBP-202ENST00000413219 CYP4F30PQ9H0H9 118 aa11.2□□□□□ -0.62
SDCBP-202ENST00000413219 ATRQ13535 2644 aa11.19□□□□□ -0.62
SDCBP-202ENST00000413219 IGLV8-61A0A075B6I0 122 aa11.19□□□□□ -0.62
SDCBP-202ENST00000413219 C1orf64Q8NEQ6 169 aa11.18□□□□□ -0.62
SDCBP-202ENST00000413219 Q1T7F1 81 aa11.18□□□□□ -0.62
SDCBP-202ENST00000413219 IGFL1Q6UW32 110 aa11.18□□□□□ -0.62
SDCBP-202ENST00000413219 HELZ2Q9BYK8 2649 aaKnown RBP11.17□□□□□ -0.62
SDCBP-202ENST00000413219 NDUFB1O75438 58 aa11.16□□□□□ -0.62
SDCBP-202ENST00000413219 TRRAPQ9Y4A5 3859 aa11.16□□□□□ -0.62
SDCBP-202ENST00000413219 PKIGQ9Y2B9 76 aa11.13□□□□□ -0.63
SDCBP-202ENST00000413219 OTOGQ6ZRI0 2925 aa11.13□□□□□ -0.63
SDCBP-202ENST00000413219 PKD1L1Q8TDX9 2849 aa11.12□□□□□ -0.63
SDCBP-202ENST00000413219 MP68P56378 58 aa11.1□□□□□ -0.63
SDCBP-202ENST00000413219 DNAH1Q9P2D7 4330 aa11.09□□□□□ -0.63
SDCBP-202ENST00000413219 A0A087WSZ3 146 aa11.08□□□□□ -0.63
SDCBP-202ENST00000413219 A0A0G2JQZ4 141 aa11.08□□□□□ -0.64
SDCBP-202ENST00000413219 A0A1W2PNN7 141 aa11.08□□□□□ -0.64
SDCBP-202ENST00000413219 KRTAP29-1A8MX34 341 aaPredicted RBP11.07□□□□□ -0.64
SDCBP-202ENST00000413219 C16orf90A8MZG2 172 aa11.07□□□□□ -0.64
SDCBP-202ENST00000413219 WFDC13Q8IUB5 93 aa11.07□□□□□ -0.64
SDCBP-202ENST00000413219 TENM3Q9P273 2699 aa11.07□□□□□ -0.64
SDCBP-202ENST00000413219 TRAV22A0A0B4J277 110 aa11.07□□□□□ -0.64
SDCBP-202ENST00000413219 H3BPC8 53 aa11.06□□□□□ -0.64
SDCBP-202ENST00000413219 PRLHP81277 87 aa11.06□□□□□ -0.64
SDCBP-202ENST00000413219 KMT2BQ9UMN6 2715 aaPredicted RBP11.06□□□□□ -0.64
SDCBP-202ENST00000413219 LRCOL1A6NCL2 159 aa11.05□□□□□ -0.64
SDCBP-202ENST00000413219 DEFB116Q30KQ4 102 aa11.05□□□□□ -0.64
SDCBP-202ENST00000413219 C1orf195Q5TG92 126 aa11.05□□□□□ -0.64
SDCBP-202ENST00000413219 A0A096LNI7 61 aa11.05□□□□□ -0.64
SDCBP-202ENST00000413219 CNBPP62633 177 aaKnown RBP11.04□□□□□ -0.64
SDCBP-202ENST00000413219 UBE2AP49459 152 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms