RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 TTTY13Q9BZ97 58 aa11.09□□□□□ -0.63
TRIM56-202ENST00000412507 SPANXB1Q9NS25 103 aaPredicted RBP11.09□□□□□ -0.63
TRIM56-202ENST00000412507 ETDCA0A1B0GVM5 59 aa11.08□□□□□ -0.64
TRIM56-202ENST00000412507 KRTAP4-16G5E9R7 235 aaPredicted RBP11.08□□□□□ -0.64
TRIM56-202ENST00000412507 NDUFC2O95298 119 aa11.08□□□□□ -0.64
TRIM56-202ENST00000412507 COX8AP10176 69 aa11.08□□□□□ -0.64
TRIM56-202ENST00000412507 LITAFQ99732 161 aa11.08□□□□□ -0.64
TRIM56-202ENST00000412507 DLEU1O43261 78 aa11.07□□□□□ -0.64
TRIM56-202ENST00000412507 PCP2Q8IVA1 136 aa11.07□□□□□ -0.64
TRIM56-202ENST00000412507 LINC00518Q8N0U6 118 aa11.07□□□□□ -0.64
TRIM56-202ENST00000412507 TIMM17BO60830 172 aa11.05□□□□□ -0.64
TRIM56-202ENST00000412507 TSPAN13O95857 204 aa11.05□□□□□ -0.64
TRIM56-202ENST00000412507 S100A7L2Q5SY68 101 aa11.05□□□□□ -0.64
TRIM56-202ENST00000412507 SLC25A34Q6PIV7 304 aa11.05□□□□□ -0.64
TRIM56-202ENST00000412507 SCGB1D4Q6XE38 83 aa11.05□□□□□ -0.64
TRIM56-202ENST00000412507 LINC00308Q8TCZ7 52 aa11.04□□□□□ -0.64
TRIM56-202ENST00000412507 SMCR5Q8TEV8 140 aa11.04□□□□□ -0.64
TRIM56-202ENST00000412507 C14orf144Q96I85 54 aa11.04□□□□□ -0.64
TRIM56-202ENST00000412507 SPRR4Q96PI1 79 aa11.04□□□□□ -0.64
TRIM56-202ENST00000412507 IGLV6-57P01721 117 aa11.03□□□□□ -0.64
TRIM56-202ENST00000412507 B5MCH6 92 aa11.02□□□□□ -0.65
TRIM56-202ENST00000412507 UQCR10Q9UDW1 63 aa11.02□□□□□ -0.65
TRIM56-202ENST00000412507 LPAP08519 4548 aa11.02□□□□□ -0.65
TRIM56-202ENST00000412507 C3orf22Q8N5N4 141 aa11.01□□□□□ -0.65
TRIM56-202ENST00000412507 TSTD3H0UI37 97 aa11□□□□□ -0.65
TRIM56-202ENST00000412507 SPANXCQ9NY87 97 aa11□□□□□ -0.65
TRIM56-202ENST00000412507 ZNF706Q9Y5V0 76 aaPredicted RBP11□□□□□ -0.65
TRIM56-202ENST00000412507 TRAV23DV6A0A075B6W5 121 aa10.99□□□□□ -0.65
TRIM56-202ENST00000412507 PRR4Q16378 134 aa10.98□□□□□ -0.65
TRIM56-202ENST00000412507 LINC00304Q8N9R0 145 aa10.98□□□□□ -0.65
TRIM56-202ENST00000412507 Q6ZRX8 168 aa10.97□□□□□ -0.65
TRIM56-202ENST00000412507 Q9BRP9 147 aa10.97□□□□□ -0.65
TRIM56-202ENST00000412507 PPDPFQ9H3Y8 114 aa10.97□□□□□ -0.65
TRIM56-202ENST00000412507 ERC2-IT1O76042 136 aa10.96□□□□□ -0.65
TRIM56-202ENST00000412507 Q6ZVH6 145 aa10.96□□□□□ -0.65
TRIM56-202ENST00000412507 OR13C6PQ8NH95 151 aa10.96□□□□□ -0.65
TRIM56-202ENST00000412507 PRO1933Q9H354 126 aa10.96□□□□□ -0.65
TRIM56-202ENST00000412507 HIGD1BQ9P298 99 aa10.96□□□□□ -0.65
TRIM56-202ENST00000412507 ZNF73O43830 326 aaPredicted RBP10.95□□□□□ -0.66
TRIM56-202ENST00000412507 SPANXDQ9BXN6 97 aa10.95□□□□□ -0.66
TRIM56-202ENST00000412507 COPS9Q8WXC6 57 aa10.94□□□□□ -0.66
TRIM56-202ENST00000412507 GAGE2AQ6NT46 116 aa10.93□□□□□ -0.66
TRIM56-202ENST00000412507 CBY1Q9Y3M2 126 aa10.92□□□□□ -0.66
TRIM56-202ENST00000412507 LINC00483Q53H64 154 aa10.91□□□□□ -0.66
TRIM56-202ENST00000412507 C2orf91Q6ZV80 131 aa10.91□□□□□ -0.66
TRIM56-202ENST00000412507 IFITM1P13164 125 aa10.9□□□□□ -0.66
TRIM56-202ENST00000412507 HINT1P49773 126 aaPredicted RBP10.89□□□□□ -0.67
TRIM56-202ENST00000412507 TAL2Q16559 108 aa10.89□□□□□ -0.67
TRIM56-202ENST00000412507 HIST1H4GQ99525 98 aa10.89□□□□□ -0.67
TRIM56-202ENST00000412507 RNF213Q63HN8 5207 aa10.89□□□□□ -0.67
TRIM56-202ENST00000412507 RETNLBQ9BQ08 111 aa10.88□□□□□ -0.67
TRIM56-202ENST00000412507 MUSTN1Q8IVN3 82 aa10.87□□□□□ -0.67
TRIM56-202ENST00000412507 HSD52Q0P140 79 aa10.86□□□□□ -0.67
TRIM56-202ENST00000412507 Q8NBF4 154 aa10.86□□□□□ -0.67
TRIM56-202ENST00000412507 IGLV9-49A0A0B4J1Y8 123 aa10.84□□□□□ -0.67
TRIM56-202ENST00000412507 CTAG1AP78358 180 aa10.84□□□□□ -0.67
TRIM56-202ENST00000412507 SPAG11AQ6PDA7 123 aa10.84□□□□□ -0.67
TRIM56-202ENST00000412507 ST20-AS1Q8NBB2 130 aa10.84□□□□□ -0.67
TRIM56-202ENST00000412507 C6orf99Q4VX62 202 aa10.83□□□□□ -0.68
TRIM56-202ENST00000412507 C4orf48Q5BLP8 95 aa10.83□□□□□ -0.68
TRIM56-202ENST00000412507 MOBPQ13875 183 aa10.82□□□□□ -0.68
TRIM56-202ENST00000412507 COX7BP24311 80 aa10.81□□□□□ -0.68
TRIM56-202ENST00000412507 CEND1Q8N111 149 aa10.81□□□□□ -0.68
TRIM56-202ENST00000412507 TMEM238LA0A1B0GVL6 79 aa10.8□□□□□ -0.68
TRIM56-202ENST00000412507 A6NDN8 102 aa10.8□□□□□ -0.68
TRIM56-202ENST00000412507 A6NJY4 79 aa10.8□□□□□ -0.68
TRIM56-202ENST00000412507 ELOF1P60002 83 aaKnown RBP10.8□□□□□ -0.68
TRIM56-202ENST00000412507 DHRS4-AS1Q9P1J3 65 aa10.8□□□□□ -0.68
TRIM56-202ENST00000412507 M0R143 59 aa10.79□□□□□ -0.68
TRIM56-202ENST00000412507 SSBP3-AS1Q7Z2R9 100 aa10.78□□□□□ -0.68
TRIM56-202ENST00000412507 A4D1N5 150 aa10.76□□□□□ -0.69
TRIM56-202ENST00000412507 C9orf153Q5TBE3 101 aa10.76□□□□□ -0.69
TRIM56-202ENST00000412507 TRAV13-2A0A0B4J235 113 aa10.74□□□□□ -0.69
TRIM56-202ENST00000412507 TRBV7-6A0A0J9YX20 115 aa10.74□□□□□ -0.69
TRIM56-202ENST00000412507 SPINK1P00995 79 aa10.74□□□□□ -0.69
TRIM56-202ENST00000412507 IGLV7-46A0A075B6I9 117 aa10.73□□□□□ -0.69
TRIM56-202ENST00000412507 PCP4L1A6NKN8 68 aa10.73□□□□□ -0.69
TRIM56-202ENST00000412507 SPRR1BP22528 89 aa10.73□□□□□ -0.69
TRIM56-202ENST00000412507 FXYD2P54710 66 aa10.73□□□□□ -0.69
TRIM56-202ENST00000412507 BVES-AS1Q5T3Y7 98 aa10.73□□□□□ -0.69
TRIM56-202ENST00000412507 A0A1B0GWB2 263 aa10.72□□□□□ -0.69
TRIM56-202ENST00000412507 SMIM11BQ8TCY0 68 aa10.71□□□□□ -0.69
TRIM56-202ENST00000412507 A0A0B4J2C4 111 aa10.7□□□□□ -0.7
TRIM56-202ENST00000412507 RAB37Q96AX2 223 aa10.7□□□□□ -0.7
TRIM56-202ENST00000412507 DEFB105AQ8NG35 78 aa10.69□□□□□ -0.7
TRIM56-202ENST00000412507 TPRXLQ17RH7 258 aa10.68□□□□□ -0.7
TRIM56-202ENST00000412507 NHP2Q9NX24 153 aaKnown RBP10.68□□□□□ -0.7
TRIM56-202ENST00000412507 CFC1BP0CG36 223 aa10.67□□□□□ -0.7
TRIM56-202ENST00000412507 CFC1P0CG37 223 aa10.67□□□□□ -0.7
TRIM56-202ENST00000412507 LAMTOR3Q9UHA4 124 aa10.67□□□□□ -0.7
TRIM56-202ENST00000412507 RPS29P62273 56 aaKnown RBP10.66□□□□□ -0.7
TRIM56-202ENST00000412507 FP248Q71RG6 208 aaPredicted RBP10.66□□□□□ -0.7
TRIM56-202ENST00000412507 TEX49A0A1B0GTD5 131 aa10.65□□□□□ -0.7
TRIM56-202ENST00000412507 BATFQ16520 125 aa10.65□□□□□ -0.7
TRIM56-202ENST00000412507 Q1RN00 199 aa10.65□□□□□ -0.7
TRIM56-202ENST00000412507 Q8N377 158 aa10.65□□□□□ -0.7
TRIM56-202ENST00000412507 CDIP1Q9H305 208 aa10.65□□□□□ -0.7
TRIM56-202ENST00000412507 PRO1854Q9UHT4 67 aa10.64□□□□□ -0.71
TRIM56-202ENST00000412507 LINC01547P58512 204 aaPredicted RBP10.63□□□□□ -0.71
TRIM56-202ENST00000412507 IGLV5-48A0A075B6I7 105 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms