RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 SPINK4O60575 86 aa1.49□□□□□ -2.17
BRCA1-204ENST00000412061 CD52P31358 61 aa1.49□□□□□ -2.17
BRCA1-204ENST00000412061 TFF3Q07654 80 aa1.49□□□□□ -2.17
BRCA1-204ENST00000412061 DEFB121Q5J5C9 76 aa1.49□□□□□ -2.17
BRCA1-204ENST00000412061 SPATA8Q6RVD6 105 aa1.49□□□□□ -2.17
BRCA1-204ENST00000412061 UBE2D4Q9Y2X8 147 aa1.49□□□□□ -2.17
BRCA1-204ENST00000412061 HILPDAQ9Y5L2 63 aa1.49□□□□□ -2.17
BRCA1-204ENST00000412061 A0A1B0GUT8 65 aa1.48□□□□□ -2.17
BRCA1-204ENST00000412061 FCER1GP30273 86 aa1.48□□□□□ -2.17
BRCA1-204ENST00000412061 PIGYQ3MUY2 71 aa1.48□□□□□ -2.17
BRCA1-204ENST00000412061 KMT2BQ9UMN6 2715 aaPredicted RBP1.48□□□□□ -2.17
BRCA1-204ENST00000412061 STATHP02808 62 aa1.47□□□□□ -2.17
BRCA1-204ENST00000412061 IFI27P40305 119 aaPredicted RBP1.47□□□□□ -2.17
BRCA1-204ENST00000412061 JMJD1CQ15652 2540 aa1.47□□□□□ -2.17
BRCA1-204ENST00000412061 SSBP3-AS1Q7Z2R9 100 aa1.47□□□□□ -2.17
BRCA1-204ENST00000412061 LINC01549A6NIU2 74 aa1.46□□□□□ -2.18
BRCA1-204ENST00000412061 K7EMI3 77 aa1.46□□□□□ -2.18
BRCA1-204ENST00000412061 PLNP26678 52 aa1.46□□□□□ -2.18
BRCA1-204ENST00000412061 A0A1B0GU69 56 aa1.45□□□□□ -2.18
BRCA1-204ENST00000412061 ATXN8Q156A1 80 aa1.45□□□□□ -2.18
BRCA1-204ENST00000412061 CNFNQ9BYD5 112 aa1.45□□□□□ -2.18
BRCA1-204ENST00000412061 COX6B1P14854 86 aa1.44□□□□□ -2.18
BRCA1-204ENST00000412061 PRCDQ00LT1 54 aa1.44□□□□□ -2.18
BRCA1-204ENST00000412061 OTOGLQ3ZCN5 2332 aa1.44□□□□□ -2.18
BRCA1-204ENST00000412061 AHCTF1Q8WYP5 2266 aa1.43□□□□□ -2.18
BRCA1-204ENST00000412061 A0A0D9SG42 100 aa1.43□□□□□ -2.18
BRCA1-204ENST00000412061 H3BVH4 76 aa1.43□□□□□ -2.18
BRCA1-204ENST00000412061 CRIP1P50238 77 aa1.43□□□□□ -2.18
BRCA1-204ENST00000412061 TIMM8BQ9Y5J9 83 aaPredicted RBP1.42□□□□□ -2.18
BRCA1-204ENST00000412061 NDUFA3O95167 84 aa1.41□□□□□ -2.18
BRCA1-204ENST00000412061 C10orf95Q9H7T3 257 aa1.41□□□□□ -2.18
BRCA1-204ENST00000412061 ASH1LQ9NR48 2969 aaKnown RBP1.41□□□□□ -2.18
BRCA1-204ENST00000412061 SPTY2D1-AS1A0A0U1RR47 76 aa1.4□□□□□ -2.18
BRCA1-204ENST00000412061 IGIPA6NJ69 53 aa1.4□□□□□ -2.18
BRCA1-204ENST00000412061 DEFB110Q30KQ9 67 aa1.4□□□□□ -2.18
BRCA1-204ENST00000412061 TMEM167AQ8TBQ9 72 aa1.4□□□□□ -2.18
BRCA1-204ENST00000412061 LINC00959A0A1B0GUT2 108 aa1.4□□□□□ -2.19
BRCA1-204ENST00000412061 DEFB108AA8MXU0 73 aa1.4□□□□□ -2.19
BRCA1-204ENST00000412061 I3L3M4 83 aa1.4□□□□□ -2.19
BRCA1-204ENST00000412061 MRPL33O75394 65 aaKnown RBP1.4□□□□□ -2.19
BRCA1-204ENST00000412061 POLR2KP53803 58 aaKnown RBP1.4□□□□□ -2.19
BRCA1-204ENST00000412061 RPL39P5Q59GN2 51 aa1.4□□□□□ -2.19
BRCA1-204ENST00000412061 SMIM2Q9BVW6 85 aa1.4□□□□□ -2.19
BRCA1-204ENST00000412061 HELZ2Q9BYK8 2649 aaKnown RBP1.39□□□□□ -2.19
BRCA1-204ENST00000412061 GOLGA4Q13439 2230 aaKnown RBP1.39□□□□□ -2.19
BRCA1-204ENST00000412061 TRBV7-4A0A0J9YYF1 115 aa1.39□□□□□ -2.19
BRCA1-204ENST00000412061 I3L2K1 104 aa1.39□□□□□ -2.19
BRCA1-204ENST00000412061 WT1-ASQ06250 92 aa1.39□□□□□ -2.19
BRCA1-204ENST00000412061 ATP5EP2Q5VTU8 51 aa1.39□□□□□ -2.19
BRCA1-204ENST00000412061 A0A0C4DFX4 3053 aa1.38□□□□□ -2.19
BRCA1-204ENST00000412061 H0YGX0 51 aa1.38□□□□□ -2.19
BRCA1-204ENST00000412061 KLK9Q2XQG4 91 aa1.38□□□□□ -2.19
BRCA1-204ENST00000412061 DEFB112Q30KQ8 113 aa1.38□□□□□ -2.19
BRCA1-204ENST00000412061 FAM208BQ5VWN6 2430 aa1.37□□□□□ -2.19
BRCA1-204ENST00000412061 K7EIM0 57 aa1.36□□□□□ -2.19
BRCA1-204ENST00000412061 TP53AIP1Q9HCN2 124 aa1.36□□□□□ -2.19
BRCA1-204ENST00000412061 PCNTO95613 3336 aa1.35□□□□□ -2.19
BRCA1-204ENST00000412061 TRAV21A0A0B4J279 112 aa1.35□□□□□ -2.19
BRCA1-204ENST00000412061 M0R1W7 72 aa1.35□□□□□ -2.19
BRCA1-204ENST00000412061 NDUFA1O15239 70 aa1.35□□□□□ -2.19
BRCA1-204ENST00000412061 COX6A2Q02221 97 aa1.35□□□□□ -2.19
BRCA1-204ENST00000412061 LINC00308Q8TCZ7 52 aa1.35□□□□□ -2.19
BRCA1-204ENST00000412061 LEAP2Q969E1 77 aa1.35□□□□□ -2.19
BRCA1-204ENST00000412061 USF3Q68DE3 2245 aa1.35□□□□□ -2.19
BRCA1-204ENST00000412061 ZNF462Q96JM2 2506 aa1.34□□□□□ -2.19
BRCA1-204ENST00000412061 M0QY20 66 aa1.34□□□□□ -2.2
BRCA1-204ENST00000412061 RPL39P62891 51 aaKnown RBP1.34□□□□□ -2.2
BRCA1-204ENST00000412061 RPL39LQ96EH5 51 aaKnown RBP1.34□□□□□ -2.2
BRCA1-204ENST00000412061 GAFA1Q96PS6 74 aa1.34□□□□□ -2.2
BRCA1-204ENST00000412061 UBL5Q9BZL1 73 aa1.34□□□□□ -2.2
BRCA1-204ENST00000412061 KAAG1Q9UBP8 84 aa1.34□□□□□ -2.2
BRCA1-204ENST00000412061 CRCT1Q9UGL9 99 aa1.34□□□□□ -2.2
BRCA1-204ENST00000412061 GOLGB1Q14789 3259 aaKnown RBP1.34□□□□□ -2.2
BRCA1-204ENST00000412061 SRCAPQ6ZRS2 3230 aa1.33□□□□□ -2.2
BRCA1-204ENST00000412061 DEFB133Q30KQ1 61 aa1.33□□□□□ -2.2
BRCA1-204ENST00000412061 ENHOQ6UWT2 76 aa1.33□□□□□ -2.2
BRCA1-204ENST00000412061 KRTAP4-1Q9BYQ7 146 aa1.33□□□□□ -2.2
BRCA1-204ENST00000412061 PRO0255Q9UI72 69 aa1.33□□□□□ -2.2
BRCA1-204ENST00000412061 ANKRD17O75179 2603 aaKnown RBP1.32□□□□□ -2.2
BRCA1-204ENST00000412061 LCE6AA0A183 80 aa1.32□□□□□ -2.2
BRCA1-204ENST00000412061 WFDC9Q8NEX5 89 aa1.32□□□□□ -2.2
BRCA1-204ENST00000412061 URB1O60287 2271 aaKnown RBP1.32□□□□□ -2.2
BRCA1-204ENST00000412061 NDUFB1O75438 58 aa1.31□□□□□ -2.2
BRCA1-204ENST00000412061 CENPFP49454 3210 aa1.31□□□□□ -2.2
BRCA1-204ENST00000412061 DEFB114Q30KQ6 69 aa1.31□□□□□ -2.2
BRCA1-204ENST00000412061 DEFB108BQ8NET1 73 aa1.31□□□□□ -2.2
BRCA1-204ENST00000412061 CDKN2A-AS1Q9UH64 79 aa1.31□□□□□ -2.2
BRCA1-204ENST00000412061 U3KQA8 63 aa1.31□□□□□ -2.2
BRCA1-204ENST00000412061 TNCP24821 2201 aa1.31□□□□□ -2.2
BRCA1-204ENST00000412061 PLCE1Q9P212 2302 aa1.3□□□□□ -2.2
BRCA1-204ENST00000412061 DNAH12Q6ZR08 3092 aa1.3□□□□□ -2.2
BRCA1-204ENST00000412061 APELAP0DMC3 54 aa1.3□□□□□ -2.2
BRCA1-204ENST00000412061 MINOS1Q5TGZ0 78 aa1.3□□□□□ -2.2
BRCA1-204ENST00000412061 NDUFA4O00483 81 aa1.29□□□□□ -2.2
BRCA1-204ENST00000412061 NREPQ16612 68 aa1.29□□□□□ -2.2
BRCA1-204ENST00000412061 DOPEY2Q9Y3R5 2298 aa1.28□□□□□ -2.2
BRCA1-204ENST00000412061 A8MTW9 85 aa1.28□□□□□ -2.2
BRCA1-204ENST00000412061 H3BUA1 57 aa1.28□□□□□ -2.2
BRCA1-204ENST00000412061 COX7BP24311 80 aa1.28□□□□□ -2.2
BRCA1-204ENST00000412061 USMG5Q96IX5 58 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms