RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 Q9BRP9 147 aa11.26□□□□□ -0.61
TSPAN4-209ENST00000409543 C3orf79P0CE67 100 aa11.25□□□□□ -0.61
TSPAN4-209ENST00000409543 C4orf48Q5BLP8 95 aa11.25□□□□□ -0.61
TSPAN4-209ENST00000409543 GAGE2AQ6NT46 116 aa11.25□□□□□ -0.61
TSPAN4-209ENST00000409543 Q8NBF4 154 aa11.24□□□□□ -0.61
TSPAN4-209ENST00000409543 IGLV7-46A0A075B6I9 117 aa11.23□□□□□ -0.61
TSPAN4-209ENST00000409543 JOSD1Q15040 202 aaPredicted RBP11.23□□□□□ -0.61
TSPAN4-209ENST00000409543 LINC00308Q8TCZ7 52 aa11.23□□□□□ -0.61
TSPAN4-209ENST00000409543 ZNF815PA8K554 130 aa11.22□□□□□ -0.61
TSPAN4-209ENST00000409543 ZNF73O43830 326 aaPredicted RBP11.22□□□□□ -0.61
TSPAN4-209ENST00000409543 TPRXLQ17RH7 258 aa11.22□□□□□ -0.61
TSPAN4-209ENST00000409543 SPANXCQ9NY87 97 aa11.22□□□□□ -0.61
TSPAN4-209ENST00000409543 CBY1Q9Y3M2 126 aa11.22□□□□□ -0.61
TSPAN4-209ENST00000409543 KRTDAPP60985 99 aa11.21□□□□□ -0.61
TSPAN4-209ENST00000409543 MUC2Q02817 5179 aa11.19□□□□□ -0.62
TSPAN4-209ENST00000409543 TTTY13Q9BZ97 58 aa11.19□□□□□ -0.62
TSPAN4-209ENST00000409543 SPINK1P00995 79 aa11.18□□□□□ -0.62
TSPAN4-209ENST00000409543 SSBP3-AS1Q7Z2R9 100 aa11.18□□□□□ -0.62
TSPAN4-209ENST00000409543 IGLV9-49A0A0B4J1Y8 123 aa11.17□□□□□ -0.62
TSPAN4-209ENST00000409543 HINT1P49773 126 aaPredicted RBP11.17□□□□□ -0.62
TSPAN4-209ENST00000409543 MOBPQ13875 183 aa11.17□□□□□ -0.62
TSPAN4-209ENST00000409543 OR13C6PQ8NH95 151 aa11.17□□□□□ -0.62
TSPAN4-209ENST00000409543 CDIP1Q9H305 208 aa11.17□□□□□ -0.62
TSPAN4-209ENST00000409543 C20orf202A1L168 122 aa11.16□□□□□ -0.62
TSPAN4-209ENST00000409543 FP248Q71RG6 208 aaPredicted RBP11.16□□□□□ -0.62
TSPAN4-209ENST00000409543 C5orf52A6NGY3 159 aa11.15□□□□□ -0.62
TSPAN4-209ENST00000409543 SPANXDQ9BXN6 97 aa11.15□□□□□ -0.62
TSPAN4-209ENST00000409543 LINC00518Q8N0U6 118 aa11.13□□□□□ -0.63
TSPAN4-209ENST00000409543 ST20-AS1Q8NBB2 130 aa11.12□□□□□ -0.63
TSPAN4-209ENST00000409543 AKR1D1P51857 326 aa11.11□□□□□ -0.63
TSPAN4-209ENST00000409543 RPS29P62273 56 aaKnown RBP11.11□□□□□ -0.63
TSPAN4-209ENST00000409543 ANKRD39Q53RE8 183 aa11.11□□□□□ -0.63
TSPAN4-209ENST00000409543 SCGB1D4Q6XE38 83 aa11.11□□□□□ -0.63
TSPAN4-209ENST00000409543 DHRS4-AS1Q9P1J3 65 aa11.1□□□□□ -0.63
TSPAN4-209ENST00000409543 ATOH7Q8N100 152 aa11.09□□□□□ -0.63
TSPAN4-209ENST00000409543 A0A0U1RQV1 116 aa11.08□□□□□ -0.64
TSPAN4-209ENST00000409543 COPS9Q8WXC6 57 aa11.08□□□□□ -0.64
TSPAN4-209ENST00000409543 IFITM1P13164 125 aa11.07□□□□□ -0.64
TSPAN4-209ENST00000409543 C9orf153Q5TBE3 101 aa11.07□□□□□ -0.64
TSPAN4-209ENST00000409543 SPRR1BP22528 89 aa11.06□□□□□ -0.64
TSPAN4-209ENST00000409543 Q6ZVH6 145 aa11.06□□□□□ -0.64
TSPAN4-209ENST00000409543 Q8N377 158 aa11.06□□□□□ -0.64
TSPAN4-209ENST00000409543 COX7BP24311 80 aa11.05□□□□□ -0.64
TSPAN4-209ENST00000409543 ELOF1P60002 83 aaKnown RBP11.05□□□□□ -0.64
TSPAN4-209ENST00000409543 C6orf99Q4VX62 202 aa11.05□□□□□ -0.64
TSPAN4-209ENST00000409543 PCP2Q8IVA1 136 aa11.05□□□□□ -0.64
TSPAN4-209ENST00000409543 SLC25A20O43772 301 aa11.04□□□□□ -0.64
TSPAN4-209ENST00000409543 SNRPEP62304 92 aaKnown RBP11.04□□□□□ -0.64
TSPAN4-209ENST00000409543 KRTAP13-3Q3SY46 172 aa11.04□□□□□ -0.64
TSPAN4-209ENST00000409543 MUC17Q685J3 4493 aa11.03□□□□□ -0.64
TSPAN4-209ENST00000409543 SLC25A34Q6PIV7 304 aa11.03□□□□□ -0.64
TSPAN4-209ENST00000409543 TRBV7-6A0A0J9YX20 115 aa11.02□□□□□ -0.65
TSPAN4-209ENST00000409543 MUSTN1Q8IVN3 82 aa11.02□□□□□ -0.65
TSPAN4-209ENST00000409543 HIST3H2BBQ8N257 126 aa11.01□□□□□ -0.65
TSPAN4-209ENST00000409543 A6NDN8 102 aa10.99□□□□□ -0.65
TSPAN4-209ENST00000409543 HIST1H2BLQ99880 126 aa10.99□□□□□ -0.65
TSPAN4-209ENST00000409543 LAMTOR3Q9UHA4 124 aa10.99□□□□□ -0.65
TSPAN4-209ENST00000409543 S100A1P23297 94 aa10.98□□□□□ -0.65
TSPAN4-209ENST00000409543 S100A2P29034 98 aa10.98□□□□□ -0.65
TSPAN4-209ENST00000409543 A0A1B0GWB2 263 aa10.97□□□□□ -0.65
TSPAN4-209ENST00000409543 TAL2Q16559 108 aa10.97□□□□□ -0.65
TSPAN4-209ENST00000409543 TRAV13-2A0A0B4J235 113 aa10.94□□□□□ -0.66
TSPAN4-209ENST00000409543 TEX49A0A1B0GTD5 131 aa10.94□□□□□ -0.66
TSPAN4-209ENST00000409543 DEFB105AQ8NG35 78 aa10.94□□□□□ -0.66
TSPAN4-209ENST00000409543 HSBP1L1C9JCN9 74 aa10.93□□□□□ -0.66
TSPAN4-209ENST00000409543 FAT4Q6V0I7 4981 aa10.93□□□□□ -0.66
TSPAN4-209ENST00000409543 A4D1N5 150 aa10.92□□□□□ -0.66
TSPAN4-209ENST00000409543 ASB16-AS1Q495Z4 193 aa10.92□□□□□ -0.66
TSPAN4-209ENST00000409543 S100A6P06703 90 aa10.91□□□□□ -0.66
TSPAN4-209ENST00000409543 Q1RN00 199 aa10.91□□□□□ -0.66
TSPAN4-209ENST00000409543 LIMD2Q9BT23 127 aa10.91□□□□□ -0.66
TSPAN4-209ENST00000409543 IGLV5-48A0A075B6I7 105 aa10.9□□□□□ -0.66
TSPAN4-209ENST00000409543 HRCT1Q6UXD1 115 aa10.9□□□□□ -0.66
TSPAN4-209ENST00000409543 SMIM11BQ8TCY0 68 aa10.9□□□□□ -0.66
TSPAN4-209ENST00000409543 PRO1933Q9H354 126 aa10.89□□□□□ -0.67
TSPAN4-209ENST00000409543 LINC01547P58512 204 aaPredicted RBP10.88□□□□□ -0.67
TSPAN4-209ENST00000409543 CD164Q04900 197 aa10.88□□□□□ -0.67
TSPAN4-209ENST00000409543 SMIM29Q86T20 159 aa10.88□□□□□ -0.67
TSPAN4-209ENST00000409543 SEC61BP60468 96 aaKnown RBP10.87□□□□□ -0.67
TSPAN4-209ENST00000409543 NHP2Q9NX24 153 aaKnown RBP10.87□□□□□ -0.67
TSPAN4-209ENST00000409543 LCE2AQ5TA79 106 aaPredicted RBP10.86□□□□□ -0.67
TSPAN4-209ENST00000409543 XP32Q5T750 250 aa10.84□□□□□ -0.67
TSPAN4-209ENST00000409543 VAMP3Q15836 100 aa10.83□□□□□ -0.68
TSPAN4-209ENST00000409543 H7C2G1 150 aa10.82□□□□□ -0.68
TSPAN4-209ENST00000409543 SCGB1D1O95968 90 aa10.81□□□□□ -0.68
TSPAN4-209ENST00000409543 Q5XG85 94 aa10.79□□□□□ -0.68
TSPAN4-209ENST00000409543 LINC00575Q6W349 94 aa10.79□□□□□ -0.68
TSPAN4-209ENST00000409543 KRTAP4-1Q9BYQ7 146 aa10.77□□□□□ -0.69
TSPAN4-209ENST00000409543 COX8AP10176 69 aa10.76□□□□□ -0.69
TSPAN4-209ENST00000409543 HIST1H4GQ99525 98 aa10.76□□□□□ -0.69
TSPAN4-209ENST00000409543 A0A0G2JQZ4 141 aa10.75□□□□□ -0.69
TSPAN4-209ENST00000409543 hADV29S1A0JD25 119 aa10.74□□□□□ -0.69
TSPAN4-209ENST00000409543 DLEU1O43261 78 aa10.74□□□□□ -0.69
TSPAN4-209ENST00000409543 Q6ZQY7 126 aa10.72□□□□□ -0.69
TSPAN4-209ENST00000409543 C9orf92A6NGG3 77 aa10.71□□□□□ -0.69
TSPAN4-209ENST00000409543 F8WEM9 126 aa10.71□□□□□ -0.69
TSPAN4-209ENST00000409543 C1orf195Q5TG92 126 aa10.71□□□□□ -0.69
TSPAN4-209ENST00000409543 C12orf57Q99622 126 aa10.71□□□□□ -0.69
TSPAN4-209ENST00000409543 BVES-AS1Q5T3Y7 98 aa10.69□□□□□ -0.7
TSPAN4-209ENST00000409543 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms