RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 SMR3BP02814 79 aaPredicted RBP16.47■□□□□ 0.23
SPIRE1-202ENST00000409402 COX6B2Q6YFQ2 88 aa16.46■□□□□ 0.23
SPIRE1-202ENST00000409402 C9orf129Q5T035 196 aaKnown RBP16.46■□□□□ 0.23
SPIRE1-202ENST00000409402 TLX1NBP0CAT3 122 aa16.45■□□□□ 0.22
SPIRE1-202ENST00000409402 IGFL1Q6UW32 110 aa16.43■□□□□ 0.22
SPIRE1-202ENST00000409402 PLA2G2DQ9UNK4 145 aa16.42■□□□□ 0.22
SPIRE1-202ENST00000409402 K7EQZ3 153 aa16.4■□□□□ 0.22
SPIRE1-202ENST00000409402 FLNBO75369 2602 aaKnown RBP16.38■□□□□ 0.21
SPIRE1-202ENST00000409402 HECTD1Q9ULT8 2610 aa16.37■□□□□ 0.21
SPIRE1-202ENST00000409402 DSCR10P59022 87 aa16.36■□□□□ 0.21
SPIRE1-202ENST00000409402 ZNF575Q86XF7 245 aa16.36■□□□□ 0.21
SPIRE1-202ENST00000409402 IGLV7-43P04211 117 aa16.36■□□□□ 0.21
SPIRE1-202ENST00000409402 CNBPP62633 177 aaKnown RBP16.32■□□□□ 0.2
SPIRE1-202ENST00000409402 C9orf92A6NGG3 77 aa16.31■□□□□ 0.2
SPIRE1-202ENST00000409402 OBSCN-AS1Q96MR7 158 aa16.3■□□□□ 0.2
SPIRE1-202ENST00000409402 C8orf17Q9NRJ1 99 aa16.3■□□□□ 0.2
SPIRE1-202ENST00000409402 PSORS1C2Q9UIG4 136 aa16.29■□□□□ 0.2
SPIRE1-202ENST00000409402 Q8N377 158 aa16.29■□□□□ 0.2
SPIRE1-202ENST00000409402 A0A1W2PNN7 141 aa16.28■□□□□ 0.2
SPIRE1-202ENST00000409402 GOLGB1Q14789 3259 aaKnown RBP16.28■□□□□ 0.2
SPIRE1-202ENST00000409402 CASC10Q5T4H9 136 aa16.28■□□□□ 0.2
SPIRE1-202ENST00000409402 A0A1B0GVX0 72 aa16.27■□□□□ 0.19
SPIRE1-202ENST00000409402 EIF4EBP3O60516 100 aaPredicted RBP16.26■□□□□ 0.19
SPIRE1-202ENST00000409402 PRR15Q8IV56 129 aa16.26■□□□□ 0.19
SPIRE1-202ENST00000409402 IGLV8-61A0A075B6I0 122 aa16.24■□□□□ 0.19
SPIRE1-202ENST00000409402 ANAPC11Q9NYG5 84 aa16.24■□□□□ 0.19
SPIRE1-202ENST00000409402 SPRR4Q96PI1 79 aa16.19■□□□□ 0.18
SPIRE1-202ENST00000409402 ERC2-IT1O76042 136 aa16.17■□□□□ 0.18
SPIRE1-202ENST00000409402 A0A0G2JQZ4 141 aa16.14■□□□□ 0.18
SPIRE1-202ENST00000409402 MGAM2Q2M2H8 2515 aa16.11■□□□□ 0.17
SPIRE1-202ENST00000409402 COA5Q86WW8 74 aa16.1■□□□□ 0.17
SPIRE1-202ENST00000409402 RPS28P62857 69 aaKnown RBP16.08■□□□□ 0.16
SPIRE1-202ENST00000409402 TNP2Q05952 138 aa16.08■□□□□ 0.16
SPIRE1-202ENST00000409402 RBM12B-AS1Q9P1G2 102 aa16.08■□□□□ 0.16
SPIRE1-202ENST00000409402 LINC01600Q96MT4 127 aa16.07■□□□□ 0.16
SPIRE1-202ENST00000409402 IGLV5-37A0A075B6J1 123 aa16.06■□□□□ 0.16
SPIRE1-202ENST00000409402 PRO0628Q9UI54 55 aa16.02■□□□□ 0.15
SPIRE1-202ENST00000409402 USP24Q9UPU5 2620 aa16■□□□□ 0.15
SPIRE1-202ENST00000409402 WIPF1O43516 503 aa15.97■□□□□ 0.15
SPIRE1-202ENST00000409402 C4orf26Q17RF5 130 aa15.94■□□□□ 0.14
SPIRE1-202ENST00000409402 UQCR11O14957 56 aa15.93■□□□□ 0.14
SPIRE1-202ENST00000409402 A0A1W2PNM2 257 aa15.93■□□□□ 0.14
SPIRE1-202ENST00000409402 FLNAP21333 2647 aaKnown RBP15.86■□□□□ 0.13
SPIRE1-202ENST00000409402 CYP4F30PQ9H0H9 118 aa15.85■□□□□ 0.13
SPIRE1-202ENST00000409402 HELZ2Q9BYK8 2649 aaKnown RBP15.84■□□□□ 0.13
SPIRE1-202ENST00000409402 CD164Q04900 197 aa15.84■□□□□ 0.13
SPIRE1-202ENST00000409402 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.84■□□□□ 0.13
SPIRE1-202ENST00000409402 IGLV5-48A0A075B6I7 105 aa15.82■□□□□ 0.12
SPIRE1-202ENST00000409402 A8MUN3 132 aa15.81■□□□□ 0.12
SPIRE1-202ENST00000409402 KLKP1Q107X0 134 aa15.8■□□□□ 0.12
SPIRE1-202ENST00000409402 PRRC2CQ9Y520 2896 aaKnown RBP15.79■□□□□ 0.12
SPIRE1-202ENST00000409402 ITPR3Q14573 2671 aa15.79■□□□□ 0.12
SPIRE1-202ENST00000409402 Q6ZSA8 131 aa15.78■□□□□ 0.12
SPIRE1-202ENST00000409402 IGLV7-46A0A075B6I9 117 aa15.77■□□□□ 0.12
SPIRE1-202ENST00000409402 PRR26Q8N8Z3 221 aa15.77■□□□□ 0.12
SPIRE1-202ENST00000409402 MIR22HGQ0VDD5 57 aa15.75■□□□□ 0.11
SPIRE1-202ENST00000409402 DNAH12Q6ZR08 3092 aa15.75■□□□□ 0.11
SPIRE1-202ENST00000409402 SPINT4Q6UDR6 99 aa15.74■□□□□ 0.11
SPIRE1-202ENST00000409402 Q8N1X5 172 aa15.73■□□□□ 0.11
SPIRE1-202ENST00000409402 FAM229BQ4G0N7 80 aa15.7■□□□□ 0.1
SPIRE1-202ENST00000409402 CRIPTQ9P021 101 aa15.7■□□□□ 0.1
SPIRE1-202ENST00000409402 FAM104AQ969W3 186 aa15.68■□□□□ 0.1
SPIRE1-202ENST00000409402 PLAC8Q9NZF1 115 aa15.68■□□□□ 0.1
SPIRE1-202ENST00000409402 LINC01554Q52M75 96 aa15.67■□□□□ 0.1
SPIRE1-202ENST00000409402 ATRQ13535 2644 aa15.63■□□□□ 0.09
SPIRE1-202ENST00000409402 MAST4O15021 2626 aa15.62■□□□□ 0.09
SPIRE1-202ENST00000409402 BPTFQ12830 3046 aa15.61■□□□□ 0.09
SPIRE1-202ENST00000409402 SPANXA2-OT1Q8N9U9 137 aa15.61■□□□□ 0.09
SPIRE1-202ENST00000409402 CR1P17927 2039 aa15.58■□□□□ 0.08
SPIRE1-202ENST00000409402 H7BZZ5 65 aa15.58■□□□□ 0.08
SPIRE1-202ENST00000409402 CFAP46Q8IYW2 2715 aa15.54■□□□□ 0.08
SPIRE1-202ENST00000409402 A0A0D9SG42 100 aa15.53■□□□□ 0.08
SPIRE1-202ENST00000409402 M0R2T5 61 aa15.5■□□□□ 0.07
SPIRE1-202ENST00000409402 LCE6AA0A183 80 aa15.44■□□□□ 0.06
SPIRE1-202ENST00000409402 UTRNP46939 3433 aa15.43■□□□□ 0.06
SPIRE1-202ENST00000409402 SPRR1AP35321 89 aa15.41■□□□□ 0.06
SPIRE1-202ENST00000409402 CDC42SE1Q9NRR8 79 aa15.41■□□□□ 0.06
SPIRE1-202ENST00000409402 CHD7Q9P2D1 2997 aa15.38■□□□□ 0.05
SPIRE1-202ENST00000409402 OCR1Q9BZK8 76 aa15.37■□□□□ 0.05
SPIRE1-202ENST00000409402 Q5VSD8 79 aa15.36■□□□□ 0.05
SPIRE1-202ENST00000409402 KRTAP1-5Q9BYS1 174 aa15.36■□□□□ 0.05
SPIRE1-202ENST00000409402 ZCCHC13Q8WW36 166 aaKnown RBP15.36■□□□□ 0.05
SPIRE1-202ENST00000409402 HRES1P13985 223 aa15.32■□□□□ 0.04
SPIRE1-202ENST00000409402 CEP350Q5VT06 3117 aa15.31■□□□□ 0.04
SPIRE1-202ENST00000409402 Q8NDZ9 215 aa15.3■□□□□ 0.04
SPIRE1-202ENST00000409402 SPRR1BP22528 89 aa15.28■□□□□ 0.04
SPIRE1-202ENST00000409402 MMP24-AS1A0A0U1RRL7 71 aa15.27■□□□□ 0.03
SPIRE1-202ENST00000409402 CAMK2N1Q7Z7J9 78 aa15.26■□□□□ 0.03
SPIRE1-202ENST00000409402 KRTAP10-1P60331 282 aa15.25■□□□□ 0.03
SPIRE1-202ENST00000409402 CSAG1Q6PB30 78 aa15.22■□□□□ 0.03
SPIRE1-202ENST00000409402 SEC61BP60468 96 aaKnown RBP15.22■□□□□ 0.03
SPIRE1-202ENST00000409402 KRTAP10-2P60368 255 aa15.2■□□□□ 0.02
SPIRE1-202ENST00000409402 C5orf42Q9H799 3197 aa15.19■□□□□ 0.02
SPIRE1-202ENST00000409402 KRTAP26-1Q6PEX3 210 aa15.19■□□□□ 0.02
SPIRE1-202ENST00000409402 S4R3F8 94 aa15.19■□□□□ 0.02
SPIRE1-202ENST00000409402 CHD9Q3L8U1 2897 aa15.18■□□□□ 0.02
SPIRE1-202ENST00000409402 A0A1B0GU33 70 aa15.17■□□□□ 0.02
SPIRE1-202ENST00000409402 CENPEQ02224 2701 aa15.17■□□□□ 0.02
SPIRE1-202ENST00000409402 STAB1Q9NY15 2570 aa15.15■□□□□ 0.02
SPIRE1-202ENST00000409402 Q8N9P0 234 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms