RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 RTL8CO15255 209 aa9.38□□□□□ -0.91
AFF3-202ENST00000409236 PHF5AQ7RTV0 110 aaKnown RBP9.37□□□□□ -0.91
AFF3-202ENST00000409236 A0A0D9SG42 100 aa9.37□□□□□ -0.91
AFF3-202ENST00000409236 Q75L30 129 aa9.36□□□□□ -0.91
AFF3-202ENST00000409236 KCNQ1DNQ9H478 68 aa9.35□□□□□ -0.91
AFF3-202ENST00000409236 OBSCN-AS1Q96MR7 158 aa9.35□□□□□ -0.91
AFF3-202ENST00000409236 AKAP13Q12802 2813 aa9.34□□□□□ -0.91
AFF3-202ENST00000409236 IGFL1Q6UW32 110 aa9.32□□□□□ -0.92
AFF3-202ENST00000409236 LINC00304Q8N9R0 145 aa9.31□□□□□ -0.92
AFF3-202ENST00000409236 HECTD1Q9ULT8 2610 aa9.31□□□□□ -0.92
AFF3-202ENST00000409236 NBEAL1Q6ZS30 2694 aa9.31□□□□□ -0.92
AFF3-202ENST00000409236 CAMK2N1Q7Z7J9 78 aa9.31□□□□□ -0.92
AFF3-202ENST00000409236 DSCR10P59022 87 aa9.3□□□□□ -0.92
AFF3-202ENST00000409236 LITAFQ99732 161 aa9.3□□□□□ -0.92
AFF3-202ENST00000409236 WISP2O76076 250 aa9.3□□□□□ -0.92
AFF3-202ENST00000409236 LINC00315P59091 139 aa9.3□□□□□ -0.92
AFF3-202ENST00000409236 CENPEQ02224 2701 aa9.28□□□□□ -0.92
AFF3-202ENST00000409236 DNAH10OSP0CZ25 163 aa9.27□□□□□ -0.93
AFF3-202ENST00000409236 IGLV5-48A0A075B6I7 105 aa9.27□□□□□ -0.93
AFF3-202ENST00000409236 LINC00528Q8N1L1 170 aa9.26□□□□□ -0.93
AFF3-202ENST00000409236 NBDYA0A0U1RRE5 68 aa9.26□□□□□ -0.93
AFF3-202ENST00000409236 IGLV5-37A0A075B6J1 123 aa9.25□□□□□ -0.93
AFF3-202ENST00000409236 C15orf56Q8N910 161 aa9.24□□□□□ -0.93
AFF3-202ENST00000409236 IGLV1-50A0A075B6I6 118 aa9.24□□□□□ -0.93
AFF3-202ENST00000409236 FAM168BA1KXE4 195 aa9.23□□□□□ -0.93
AFF3-202ENST00000409236 MGAM2Q2M2H8 2515 aa9.23□□□□□ -0.93
AFF3-202ENST00000409236 LINC00588Q9Y4M8 146 aa9.22□□□□□ -0.93
AFF3-202ENST00000409236 A0A1B0GU33 70 aa9.22□□□□□ -0.93
AFF3-202ENST00000409236 J3QL48 77 aa9.2□□□□□ -0.94
AFF3-202ENST00000409236 CFAP46Q8IYW2 2715 aa9.19□□□□□ -0.94
AFF3-202ENST00000409236 DMBT1Q9UGM3 2413 aaPredicted RBP9.19□□□□□ -0.94
AFF3-202ENST00000409236 COL4A2P08572 1712 aa9.19□□□□□ -0.94
AFF3-202ENST00000409236 ATRQ13535 2644 aa9.19□□□□□ -0.94
AFF3-202ENST00000409236 ZNF861PO60384 105 aa9.18□□□□□ -0.94
AFF3-202ENST00000409236 STAB1Q9NY15 2570 aa9.17□□□□□ -0.94
AFF3-202ENST00000409236 PLA2G2DQ9UNK4 145 aa9.17□□□□□ -0.94
AFF3-202ENST00000409236 MAST4O15021 2626 aa9.16□□□□□ -0.94
AFF3-202ENST00000409236 C9orf92A6NGG3 77 aa9.16□□□□□ -0.94
AFF3-202ENST00000409236 Q8N377 158 aa9.14□□□□□ -0.95
AFF3-202ENST00000409236 ZNF575Q86XF7 245 aa9.14□□□□□ -0.95
AFF3-202ENST00000409236 HRES1P13985 223 aa9.14□□□□□ -0.95
AFF3-202ENST00000409236 CDSNQ15517 529 aa9.14□□□□□ -0.95
AFF3-202ENST00000409236 Q8N1X5 172 aa9.13□□□□□ -0.95
AFF3-202ENST00000409236 SMR3AQ99954 134 aa9.12□□□□□ -0.95
AFF3-202ENST00000409236 IGLV7-46A0A075B6I9 117 aa9.11□□□□□ -0.95
AFF3-202ENST00000409236 OCR1Q9BZK8 76 aa9.11□□□□□ -0.95
AFF3-202ENST00000409236 Q8NAQ8 132 aa9.1□□□□□ -0.95
AFF3-202ENST00000409236 TLX1NBP0CAT3 122 aa9.08□□□□□ -0.96
AFF3-202ENST00000409236 SPINK7P58062 85 aa9.08□□□□□ -0.96
AFF3-202ENST00000409236 CSAG1Q6PB30 78 aa9.08□□□□□ -0.96
AFF3-202ENST00000409236 C9orf163Q8N9P6 203 aa9.07□□□□□ -0.96
AFF3-202ENST00000409236 LINC01558Q9Y6Z2 57 aa9.06□□□□□ -0.96
AFF3-202ENST00000409236 ASB16-AS1Q495Z4 193 aa9.05□□□□□ -0.96
AFF3-202ENST00000409236 KRTAP16-1A8MUX0 517 aa9.03□□□□□ -0.96
AFF3-202ENST00000409236 FLNAP21333 2647 aaKnown RBP9.02□□□□□ -0.97
AFF3-202ENST00000409236 IGLV7-43P04211 117 aa9.01□□□□□ -0.97
AFF3-202ENST00000409236 PRR34Q9NV39 138 aa9□□□□□ -0.97
AFF3-202ENST00000409236 SPRR4Q96PI1 79 aa9□□□□□ -0.97
AFF3-202ENST00000409236 Q5XG85 94 aa8.97□□□□□ -0.97
AFF3-202ENST00000409236 NOTCH1P46531 2555 aa8.97□□□□□ -0.97
AFF3-202ENST00000409236 STAB2Q8WWQ8 2551 aa8.97□□□□□ -0.97
AFF3-202ENST00000409236 PRR26Q8N8Z3 221 aa8.97□□□□□ -0.97
AFF3-202ENST00000409236 Q8N9P0 234 aaPredicted RBP8.96□□□□□ -0.97
AFF3-202ENST00000409236 ROMO1P60602 79 aa8.96□□□□□ -0.97
AFF3-202ENST00000409236 TNP2Q05952 138 aa8.96□□□□□ -0.98
AFF3-202ENST00000409236 PRAC1Q96KF2 57 aa8.95□□□□□ -0.98
AFF3-202ENST00000409236 S4R3F8 94 aa8.94□□□□□ -0.98
AFF3-202ENST00000409236 ITPR3Q14573 2671 aa8.94□□□□□ -0.98
AFF3-202ENST00000409236 Q5VV11 94 aa8.93□□□□□ -0.98
AFF3-202ENST00000409236 Q6ZSA8 131 aa8.91□□□□□ -0.98
AFF3-202ENST00000409236 CNBPP62633 177 aaKnown RBP8.9□□□□□ -0.98
AFF3-202ENST00000409236 FAM229BQ4G0N7 80 aa8.9□□□□□ -0.98
AFF3-202ENST00000409236 A0A1W2PNM2 257 aa8.9□□□□□ -0.99
AFF3-202ENST00000409236 KRTAP10-9P60411 292 aa8.9□□□□□ -0.99
AFF3-202ENST00000409236 WWC2-AS2Q96NR7 200 aa8.89□□□□□ -0.99
AFF3-202ENST00000409236 CENPFP49454 3210 aa8.89□□□□□ -0.99
AFF3-202ENST00000409236 GCN1Q92616 2671 aaKnown RBP8.88□□□□□ -0.99
AFF3-202ENST00000409236 KLK9Q2XQG4 91 aa8.87□□□□□ -0.99
AFF3-202ENST00000409236 PSORS1C2Q9UIG4 136 aa8.87□□□□□ -0.99
AFF3-202ENST00000409236 CHD6Q8TD26 2715 aa8.86□□□□□ -0.99
AFF3-202ENST00000409236 C19orf73Q9NVV2 129 aa8.86□□□□□ -0.99
AFF3-202ENST00000409236 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.85□□□□□ -0.99
AFF3-202ENST00000409236 COL6A5A8TX70 2615 aa8.85□□□□□ -0.99
AFF3-202ENST00000409236 FP248Q71RG6 208 aaPredicted RBP8.85□□□□□ -0.99
AFF3-202ENST00000409236 EIF4EBP3O60516 100 aaPredicted RBP8.84□□□□□ -0.99
AFF3-202ENST00000409236 A0A0G2JQZ4 141 aa8.84□□□□□ -0.99
AFF3-202ENST00000409236 A0A1W2PNN7 141 aa8.84□□□□□ -0.99
AFF3-202ENST00000409236 A0A1W2PPR1 153 aa8.83□□□□□ -1
AFF3-202ENST00000409236 A0A087WTM6 91 aa8.82□□□□□ -1
AFF3-202ENST00000409236 R4GN34 69 aa8.82□□□□□ -1
AFF3-202ENST00000409236 RPL37P61927 97 aaKnown RBP8.81□□□□□ -1
AFF3-202ENST00000409236 HELZ2Q9BYK8 2649 aaKnown RBP8.81□□□□□ -1
AFF3-202ENST00000409236 H1FX-AS1Q4G0G2 97 aa8.8□□□□□ -1
AFF3-202ENST00000409236 UNC79Q9P2D8 2635 aa8.79□□□□□ -1
AFF3-202ENST00000409236 KMT2BQ9UMN6 2715 aaPredicted RBP8.79□□□□□ -1
AFF3-202ENST00000409236 M0R2T5 61 aa8.79□□□□□ -1
AFF3-202ENST00000409236 ANAPC11Q9NYG5 84 aa8.78□□□□□ -1
AFF3-202ENST00000409236 ZCCHC13Q8WW36 166 aaKnown RBP8.78□□□□□ -1
AFF3-202ENST00000409236 FLNBO75369 2602 aaKnown RBP8.75□□□□□ -1.01
AFF3-202ENST00000409236 BAHCC1Q9P281 2608 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms