RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 A0A1W2PNM2 257 aa11.67□□□□□ -0.54
SMPD4-202ENST00000409031 GIG44P09565 113 aaPredicted RBP11.67□□□□□ -0.54
SMPD4-202ENST00000409031 A0A096LNT2 108 aa11.66□□□□□ -0.54
SMPD4-202ENST00000409031 CDC42SE1Q9NRR8 79 aa11.66□□□□□ -0.54
SMPD4-202ENST00000409031 SMR3AQ99954 134 aa11.66□□□□□ -0.54
SMPD4-202ENST00000409031 ACANP16112 2415 aa11.66□□□□□ -0.54
SMPD4-202ENST00000409031 LINC00612Q8N6U2 182 aa11.66□□□□□ -0.54
SMPD4-202ENST00000409031 IGLV5-48A0A075B6I7 105 aa11.65□□□□□ -0.54
SMPD4-202ENST00000409031 C16orf90A8MZG2 172 aa11.65□□□□□ -0.54
SMPD4-202ENST00000409031 MRPL34Q9BQ48 92 aaKnown RBP11.65□□□□□ -0.54
SMPD4-202ENST00000409031 OXTP01178 125 aa11.64□□□□□ -0.55
SMPD4-202ENST00000409031 FAM168BA1KXE4 195 aa11.61□□□□□ -0.55
SMPD4-202ENST00000409031 PHF5AQ7RTV0 110 aaKnown RBP11.61□□□□□ -0.55
SMPD4-202ENST00000409031 C15orf56Q8N910 161 aa11.59□□□□□ -0.55
SMPD4-202ENST00000409031 PLA2G2DQ9UNK4 145 aa11.58□□□□□ -0.56
SMPD4-202ENST00000409031 DNAH10OSP0CZ25 163 aa11.58□□□□□ -0.56
SMPD4-202ENST00000409031 C19orf73Q9NVV2 129 aa11.58□□□□□ -0.56
SMPD4-202ENST00000409031 FLNBO75369 2602 aaKnown RBP11.57□□□□□ -0.56
SMPD4-202ENST00000409031 C8orf17Q9NRJ1 99 aa11.57□□□□□ -0.56
SMPD4-202ENST00000409031 NUPR2A6NF83 97 aa11.57□□□□□ -0.56
SMPD4-202ENST00000409031 FAM229AH3BQW9 127 aa11.57□□□□□ -0.56
SMPD4-202ENST00000409031 CHD9Q3L8U1 2897 aa11.56□□□□□ -0.56
SMPD4-202ENST00000409031 FAM229BQ4G0N7 80 aa11.56□□□□□ -0.56
SMPD4-202ENST00000409031 MIR22HGQ0VDD5 57 aa11.55□□□□□ -0.56
SMPD4-202ENST00000409031 IGLV5-52A0A0A0MRZ9 124 aa11.54□□□□□ -0.56
SMPD4-202ENST00000409031 TLX1NBP0CAT3 122 aa11.54□□□□□ -0.56
SMPD4-202ENST00000409031 LINC00313P59037 77 aa11.53□□□□□ -0.56
SMPD4-202ENST00000409031 RBM12B-AS1Q9P1G2 102 aa11.53□□□□□ -0.56
SMPD4-202ENST00000409031 IGLV8-61A0A075B6I0 122 aa11.53□□□□□ -0.56
SMPD4-202ENST00000409031 MDFIQ99750 246 aa11.53□□□□□ -0.56
SMPD4-202ENST00000409031 MKI67P46013 3256 aaKnown RBP11.52□□□□□ -0.56
SMPD4-202ENST00000409031 LINC00588Q9Y4M8 146 aa11.5□□□□□ -0.57
SMPD4-202ENST00000409031 DSCR10P59022 87 aa11.5□□□□□ -0.57
SMPD4-202ENST00000409031 SPRR4Q96PI1 79 aa11.49□□□□□ -0.57
SMPD4-202ENST00000409031 C5orf42Q9H799 3197 aa11.48□□□□□ -0.57
SMPD4-202ENST00000409031 A0A0G2JQZ4 141 aa11.48□□□□□ -0.57
SMPD4-202ENST00000409031 A0A1W2PNN7 141 aa11.48□□□□□ -0.57
SMPD4-202ENST00000409031 A0A1B0GVX0 72 aa11.48□□□□□ -0.57
SMPD4-202ENST00000409031 Q75L30 129 aa11.48□□□□□ -0.57
SMPD4-202ENST00000409031 LAMA3Q16787 3333 aa11.48□□□□□ -0.57
SMPD4-202ENST00000409031 Q8N9P0 234 aaPredicted RBP11.45□□□□□ -0.58
SMPD4-202ENST00000409031 CHTF8P0CG12 524 aa11.43□□□□□ -0.58
SMPD4-202ENST00000409031 IGLV7-46A0A075B6I9 117 aa11.42□□□□□ -0.58
SMPD4-202ENST00000409031 LY6G6CO95867 125 aa11.41□□□□□ -0.58
SMPD4-202ENST00000409031 SPACA4Q8TDM5 124 aa11.4□□□□□ -0.58
SMPD4-202ENST00000409031 IGLV5-37A0A075B6J1 123 aa11.38□□□□□ -0.59
SMPD4-202ENST00000409031 SPINT4Q6UDR6 99 aa11.38□□□□□ -0.59
SMPD4-202ENST00000409031 TRANK1O15050 2925 aa11.38□□□□□ -0.59
SMPD4-202ENST00000409031 CR1P17927 2039 aa11.37□□□□□ -0.59
SMPD4-202ENST00000409031 Q5VV11 94 aa11.36□□□□□ -0.59
SMPD4-202ENST00000409031 BRCA2P51587 3418 aa11.36□□□□□ -0.59
SMPD4-202ENST00000409031 C1orf134Q5TEV5 83 aa11.35□□□□□ -0.59
SMPD4-202ENST00000409031 LINC01558Q9Y6Z2 57 aa11.35□□□□□ -0.59
SMPD4-202ENST00000409031 CFAP54Q96N23 3096 aa11.35□□□□□ -0.59
SMPD4-202ENST00000409031 HECTD1Q9ULT8 2610 aa11.34□□□□□ -0.59
SMPD4-202ENST00000409031 SSBP3-AS1Q7Z2R9 100 aa11.34□□□□□ -0.59
SMPD4-202ENST00000409031 Q8NDZ9 215 aa11.33□□□□□ -0.6
SMPD4-202ENST00000409031 PRR26Q8N8Z3 221 aa11.33□□□□□ -0.6
SMPD4-202ENST00000409031 LINC01554Q52M75 96 aa11.29□□□□□ -0.6
SMPD4-202ENST00000409031 NBDYA0A0U1RRE5 68 aa11.27□□□□□ -0.61
SMPD4-202ENST00000409031 USP24Q9UPU5 2620 aa11.25□□□□□ -0.61
SMPD4-202ENST00000409031 PRUNE2Q8WUY3 3088 aa11.25□□□□□ -0.61
SMPD4-202ENST00000409031 C9orf163Q8N9P6 203 aa11.23□□□□□ -0.61
SMPD4-202ENST00000409031 RTL8CO15255 209 aa11.23□□□□□ -0.61
SMPD4-202ENST00000409031 Q96NJ1 140 aa11.22□□□□□ -0.61
SMPD4-202ENST00000409031 CNBPP62633 177 aaKnown RBP11.22□□□□□ -0.61
SMPD4-202ENST00000409031 ZNF292O60281 2723 aa11.2□□□□□ -0.62
SMPD4-202ENST00000409031 ZNF861PO60384 105 aa11.2□□□□□ -0.62
SMPD4-202ENST00000409031 LAMA2P24043 3122 aaKnown RBP11.17□□□□□ -0.62
SMPD4-202ENST00000409031 SPRR1AP35321 89 aa11.17□□□□□ -0.62
SMPD4-202ENST00000409031 CASC10Q5T4H9 136 aa11.16□□□□□ -0.62
SMPD4-202ENST00000409031 H3BS24 57 aa11.15□□□□□ -0.62
SMPD4-202ENST00000409031 MMP24-AS1A0A0U1RRL7 71 aa11.14□□□□□ -0.63
SMPD4-202ENST00000409031 TYMSOSQ8TAI1 123 aa11.14□□□□□ -0.63
SMPD4-202ENST00000409031 PRAC1Q96KF2 57 aa11.13□□□□□ -0.63
SMPD4-202ENST00000409031 CRIPTQ9P021 101 aa11.12□□□□□ -0.63
SMPD4-202ENST00000409031 HELZ2Q9BYK8 2649 aaKnown RBP11.11□□□□□ -0.63
SMPD4-202ENST00000409031 CENPEQ02224 2701 aa11.1□□□□□ -0.63
SMPD4-202ENST00000409031 HRES1P13985 223 aa11.1□□□□□ -0.63
SMPD4-202ENST00000409031 SPINK7P58062 85 aa11.09□□□□□ -0.63
SMPD4-202ENST00000409031 KRTAP10-3P60369 221 aa11.09□□□□□ -0.63
SMPD4-202ENST00000409031 AKAP13Q12802 2813 aa11.07□□□□□ -0.64
SMPD4-202ENST00000409031 ZCCHC13Q8WW36 166 aaKnown RBP11.07□□□□□ -0.64
SMPD4-202ENST00000409031 LINC00472Q9H8W2 130 aa11.05□□□□□ -0.64
SMPD4-202ENST00000409031 ANAPC11Q9NYG5 84 aa11.05□□□□□ -0.64
SMPD4-202ENST00000409031 KRTAP10-11P60412 298 aa11.02□□□□□ -0.64
SMPD4-202ENST00000409031 TNP2Q05952 138 aa11.02□□□□□ -0.65
SMPD4-202ENST00000409031 UNC80Q8N2C7 3258 aa11.02□□□□□ -0.65
SMPD4-202ENST00000409031 FLNAP21333 2647 aaKnown RBP11.02□□□□□ -0.65
SMPD4-202ENST00000409031 CFAP46Q8IYW2 2715 aa11.01□□□□□ -0.65
SMPD4-202ENST00000409031 KRTAP24-1Q3LI83 254 aa11.01□□□□□ -0.65
SMPD4-202ENST00000409031 PSORS1C2Q9UIG4 136 aa11.01□□□□□ -0.65
SMPD4-202ENST00000409031 TRIOO75962 3097 aa10.99□□□□□ -0.65
SMPD4-202ENST00000409031 SPRR1BP22528 89 aa10.99□□□□□ -0.65
SMPD4-202ENST00000409031 MGAM2Q2M2H8 2515 aa10.98□□□□□ -0.65
SMPD4-202ENST00000409031 PLA2G1BP04054 148 aaKnown RBP10.97□□□□□ -0.65
SMPD4-202ENST00000409031 CHD6Q8TD26 2715 aa10.97□□□□□ -0.65
SMPD4-202ENST00000409031 MGAQ8IWI9 3026 aa10.96□□□□□ -0.65
SMPD4-202ENST00000409031 IGLV7-43P04211 117 aa10.96□□□□□ -0.66
SMPD4-202ENST00000409031 APLNQ9ULZ1 77 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms