RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 ARL17AQ8IVW1 177 aa6.95□□□□□ -1.3
APOBEC3B-204ENST00000407298 HIGD2AQ9BW72 106 aa6.95□□□□□ -1.3
APOBEC3B-204ENST00000407298 LINC00587B1AMM8 73 aa6.94□□□□□ -1.3
APOBEC3B-204ENST00000407298 E9PLD3 99 aa6.94□□□□□ -1.3
APOBEC3B-204ENST00000407298 EIF4EBP3O60516 100 aaPredicted RBP6.94□□□□□ -1.3
APOBEC3B-204ENST00000407298 SPRR1AP35321 89 aa6.94□□□□□ -1.3
APOBEC3B-204ENST00000407298 SPRR4Q96PI1 79 aa6.94□□□□□ -1.3
APOBEC3B-204ENST00000407298 FSIP2Q5CZC0 6907 aa6.93□□□□□ -1.3
APOBEC3B-204ENST00000407298 KRTAP4-16G5E9R7 235 aaPredicted RBP6.93□□□□□ -1.3
APOBEC3B-204ENST00000407298 PRYO14603 147 aa6.93□□□□□ -1.3
APOBEC3B-204ENST00000407298 ATP6V1G1O75348 118 aa6.93□□□□□ -1.3
APOBEC3B-204ENST00000407298 LGALS3P17931 250 aaKnown RBP6.93□□□□□ -1.3
APOBEC3B-204ENST00000407298 KCNQ1DNQ9H478 68 aa6.93□□□□□ -1.3
APOBEC3B-204ENST00000407298 A0A0J9YXY3 114 aa6.92□□□□□ -1.3
APOBEC3B-204ENST00000407298 TRBV10-3A0A0K0K1G6 114 aa6.92□□□□□ -1.3
APOBEC3B-204ENST00000407298 SOSTDC1Q6X4U4 206 aa6.92□□□□□ -1.3
APOBEC3B-204ENST00000407298 Q8NBF4 154 aa6.92□□□□□ -1.3
APOBEC3B-204ENST00000407298 C3orf79P0CE67 100 aa6.91□□□□□ -1.3
APOBEC3B-204ENST00000407298 ADAMTSL4-AS1Q5T5F5 129 aa6.91□□□□□ -1.3
APOBEC3B-204ENST00000407298 PET117Q6UWS5 81 aa6.91□□□□□ -1.3
APOBEC3B-204ENST00000407298 LITAFQ99732 161 aa6.91□□□□□ -1.3
APOBEC3B-204ENST00000407298 KRTAP4-1Q9BYQ7 146 aa6.9□□□□□ -1.3
APOBEC3B-204ENST00000407298 TRBV10-2A0A0K0K1G8 114 aa6.89□□□□□ -1.31
APOBEC3B-204ENST00000407298 TTTY13Q9BZ97 58 aa6.89□□□□□ -1.31
APOBEC3B-204ENST00000407298 NDUFC2O95298 119 aa6.88□□□□□ -1.31
APOBEC3B-204ENST00000407298 SMCR5Q8TEV8 140 aa6.88□□□□□ -1.31
APOBEC3B-204ENST00000407298 SPANXB1Q9NS25 103 aaPredicted RBP6.88□□□□□ -1.31
APOBEC3B-204ENST00000407298 IGLV6-57P01721 117 aa6.87□□□□□ -1.31
APOBEC3B-204ENST00000407298 DDTP30046 118 aa6.87□□□□□ -1.31
APOBEC3B-204ENST00000407298 NPC2P61916 151 aa6.87□□□□□ -1.31
APOBEC3B-204ENST00000407298 RPS29P62273 56 aaKnown RBP6.87□□□□□ -1.31
APOBEC3B-204ENST00000407298 B5MCH6 92 aa6.86□□□□□ -1.31
APOBEC3B-204ENST00000407298 CFC1BP0CG36 223 aa6.86□□□□□ -1.31
APOBEC3B-204ENST00000407298 KRTDAPP60985 99 aa6.86□□□□□ -1.31
APOBEC3B-204ENST00000407298 KRTAP9-9Q9BYP9 154 aa6.86□□□□□ -1.31
APOBEC3B-204ENST00000407298 KRTAP9-4Q9BYQ2 154 aa6.86□□□□□ -1.31
APOBEC3B-204ENST00000407298 SLC25A20O43772 301 aa6.85□□□□□ -1.31
APOBEC3B-204ENST00000407298 MIEN1Q9BRT3 115 aa6.85□□□□□ -1.31
APOBEC3B-204ENST00000407298 ETDCA0A1B0GVM5 59 aa6.84□□□□□ -1.31
APOBEC3B-204ENST00000407298 ZNF815PA8K554 130 aa6.84□□□□□ -1.31
APOBEC3B-204ENST00000407298 TIMM17BO60830 172 aa6.84□□□□□ -1.31
APOBEC3B-204ENST00000407298 ERC2-IT1O76042 136 aa6.84□□□□□ -1.31
APOBEC3B-204ENST00000407298 ANKRD39Q53RE8 183 aa6.84□□□□□ -1.31
APOBEC3B-204ENST00000407298 SSBP3-AS1Q7Z2R9 100 aa6.84□□□□□ -1.31
APOBEC3B-204ENST00000407298 LINC00308Q8TCZ7 52 aa6.84□□□□□ -1.31
APOBEC3B-204ENST00000407298 Q9BRP9 147 aa6.84□□□□□ -1.31
APOBEC3B-204ENST00000407298 LINC00483Q53H64 154 aa6.83□□□□□ -1.32
APOBEC3B-204ENST00000407298 Q8N377 158 aa6.83□□□□□ -1.32
APOBEC3B-204ENST00000407298 TRAV23DV6A0A075B6W5 121 aa6.82□□□□□ -1.32
APOBEC3B-204ENST00000407298 S100A12P80511 92 aa6.82□□□□□ -1.32
APOBEC3B-204ENST00000407298 Q6ZRX8 168 aa6.82□□□□□ -1.32
APOBEC3B-204ENST00000407298 ATOH7Q8N100 152 aa6.82□□□□□ -1.32
APOBEC3B-204ENST00000407298 S100A7L2Q5SY68 101 aa6.81□□□□□ -1.32
APOBEC3B-204ENST00000407298 HIST3H2BBQ8N257 126 aa6.81□□□□□ -1.32
APOBEC3B-204ENST00000407298 SPANXCQ9NY87 97 aa6.81□□□□□ -1.32
APOBEC3B-204ENST00000407298 C20orf202A1L168 122 aa6.8□□□□□ -1.32
APOBEC3B-204ENST00000407298 ZNF73O43830 326 aaPredicted RBP6.8□□□□□ -1.32
APOBEC3B-204ENST00000407298 S100A1P23297 94 aa6.8□□□□□ -1.32
APOBEC3B-204ENST00000407298 MOBPQ13875 183 aa6.8□□□□□ -1.32
APOBEC3B-204ENST00000407298 GAGE2AQ6NT46 116 aa6.8□□□□□ -1.32
APOBEC3B-204ENST00000407298 HIST1H2BLQ99880 126 aa6.8□□□□□ -1.32
APOBEC3B-204ENST00000407298 IGLV9-49A0A0B4J1Y8 123 aa6.79□□□□□ -1.32
APOBEC3B-204ENST00000407298 PCP2Q8IVA1 136 aa6.79□□□□□ -1.32
APOBEC3B-204ENST00000407298 TMEM238LA0A1B0GVL6 79 aa6.78□□□□□ -1.32
APOBEC3B-204ENST00000407298 SPANXDQ9BXN6 97 aa6.78□□□□□ -1.32
APOBEC3B-204ENST00000407298 MT1HP80294 61 aa6.77□□□□□ -1.33
APOBEC3B-204ENST00000407298 SCGB1D4Q6XE38 83 aa6.75□□□□□ -1.33
APOBEC3B-204ENST00000407298 ST20-AS1Q8NBB2 130 aa6.75□□□□□ -1.33
APOBEC3B-204ENST00000407298 KRTAP4-8A0A0G2JLE6 195 aa6.74□□□□□ -1.33
APOBEC3B-204ENST00000407298 OR13C6PQ8NH95 151 aa6.74□□□□□ -1.33
APOBEC3B-204ENST00000407298 IGLV8-61A0A075B6I0 122 aa6.73□□□□□ -1.33
APOBEC3B-204ENST00000407298 AKR1D1P51857 326 aa6.73□□□□□ -1.33
APOBEC3B-204ENST00000407298 JOSD1Q15040 202 aaPredicted RBP6.73□□□□□ -1.33
APOBEC3B-204ENST00000407298 KRTAP19-2Q3LHN2 52 aa6.73□□□□□ -1.33
APOBEC3B-204ENST00000407298 IFITM1P13164 125 aa6.72□□□□□ -1.33
APOBEC3B-204ENST00000407298 S100A2P29034 98 aa6.72□□□□□ -1.33
APOBEC3B-204ENST00000407298 PCOTHQ58A44 107 aa6.72□□□□□ -1.33
APOBEC3B-204ENST00000407298 C9orf153Q5TBE3 101 aa6.72□□□□□ -1.33
APOBEC3B-204ENST00000407298 LINC00518Q8N0U6 118 aa6.72□□□□□ -1.33
APOBEC3B-204ENST00000407298 ELOF1P60002 83 aaKnown RBP6.71□□□□□ -1.34
APOBEC3B-204ENST00000407298 SNRPEP62304 92 aaKnown RBP6.71□□□□□ -1.34
APOBEC3B-204ENST00000407298 C6orf99Q4VX62 202 aa6.71□□□□□ -1.34
APOBEC3B-204ENST00000407298 MUSTN1Q8IVN3 82 aa6.71□□□□□ -1.34
APOBEC3B-204ENST00000407298 CBY1Q9Y3M2 126 aa6.71□□□□□ -1.34
APOBEC3B-204ENST00000407298 M0R2T5 61 aa6.7□□□□□ -1.34
APOBEC3B-204ENST00000407298 SPRR1BP22528 89 aa6.7□□□□□ -1.34
APOBEC3B-204ENST00000407298 KRTAP10-6P60371 365 aaPredicted RBP6.7□□□□□ -1.34
APOBEC3B-204ENST00000407298 Q6ZVH6 145 aa6.7□□□□□ -1.34
APOBEC3B-204ENST00000407298 LIMD2Q9BT23 127 aa6.7□□□□□ -1.34
APOBEC3B-204ENST00000407298 C5orf52A6NGY3 159 aa6.69□□□□□ -1.34
APOBEC3B-204ENST00000407298 S100A6P06703 90 aa6.69□□□□□ -1.34
APOBEC3B-204ENST00000407298 COX7BP24311 80 aa6.68□□□□□ -1.34
APOBEC3B-204ENST00000407298 HINT1P49773 126 aaPredicted RBP6.68□□□□□ -1.34
APOBEC3B-204ENST00000407298 DHRS4-AS1Q9P1J3 65 aa6.68□□□□□ -1.34
APOBEC3B-204ENST00000407298 COPS9Q8WXC6 57 aa6.67□□□□□ -1.34
APOBEC3B-204ENST00000407298 TRBV7-6A0A0J9YX20 115 aa6.66□□□□□ -1.34
APOBEC3B-204ENST00000407298 A6NDN8 102 aa6.65□□□□□ -1.34
APOBEC3B-204ENST00000407298 SLC25A34Q6PIV7 304 aa6.65□□□□□ -1.34
APOBEC3B-204ENST00000407298 C9orf92A6NGG3 77 aa6.64□□□□□ -1.35
APOBEC3B-204ENST00000407298 HSBP1L1C9JCN9 74 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms