RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 C7orf33Q8WU49 177 aa12.05□□□□□ -0.48
EWSR1-207ENST00000406548 KRTAP24-1Q3LI83 254 aa12.04□□□□□ -0.48
EWSR1-207ENST00000406548 DNAH10OSP0CZ25 163 aa12.03□□□□□ -0.48
EWSR1-207ENST00000406548 ANK2Q01484 3957 aa12.03□□□□□ -0.48
EWSR1-207ENST00000406548 TENM3Q9P273 2699 aa12.03□□□□□ -0.48
EWSR1-207ENST00000406548 KLKP1Q107X0 134 aa12.03□□□□□ -0.48
EWSR1-207ENST00000406548 FAM236DA0A1B0GTK5 79 aa12.02□□□□□ -0.49
EWSR1-207ENST00000406548 H7BZZ5 65 aa12.02□□□□□ -0.49
EWSR1-207ENST00000406548 FAM236CP0DP71 79 aa12.02□□□□□ -0.49
EWSR1-207ENST00000406548 TLX1NBP0CAT3 122 aa12.01□□□□□ -0.49
EWSR1-207ENST00000406548 Q8N377 158 aa11.99□□□□□ -0.49
EWSR1-207ENST00000406548 DEFB105AQ8NG35 78 aa11.99□□□□□ -0.49
EWSR1-207ENST00000406548 TM2D3Q9BRN9 247 aa11.99□□□□□ -0.49
EWSR1-207ENST00000406548 PLA2G2DQ9UNK4 145 aa11.99□□□□□ -0.49
EWSR1-207ENST00000406548 NREPQ16612 68 aa11.98□□□□□ -0.49
EWSR1-207ENST00000406548 SNURFQ9Y675 71 aa11.98□□□□□ -0.49
EWSR1-207ENST00000406548 IGLV5-48A0A075B6I7 105 aa11.96□□□□□ -0.49
EWSR1-207ENST00000406548 RMI2Q96E14 147 aa11.96□□□□□ -0.49
EWSR1-207ENST00000406548 C3orf84H3BNL1 204 aa11.96□□□□□ -0.49
EWSR1-207ENST00000406548 Q6ZRX8 168 aa11.96□□□□□ -0.49
EWSR1-207ENST00000406548 Q8N9L7 120 aa11.96□□□□□ -0.49
EWSR1-207ENST00000406548 MRAPQ8TCY5 172 aa11.96□□□□□ -0.49
EWSR1-207ENST00000406548 DHRS4-AS1Q9P1J3 65 aa11.96□□□□□ -0.49
EWSR1-207ENST00000406548 IGKV4-1P06312 121 aa11.95□□□□□ -0.5
EWSR1-207ENST00000406548 CMYA5Q8N3K9 4069 aa11.95□□□□□ -0.5
EWSR1-207ENST00000406548 BPY2O14599 106 aa11.95□□□□□ -0.5
EWSR1-207ENST00000406548 PRYO14603 147 aa11.95□□□□□ -0.5
EWSR1-207ENST00000406548 IGLV5-37A0A075B6J1 123 aa11.94□□□□□ -0.5
EWSR1-207ENST00000406548 RPL37AP8A6NKH3 93 aa11.94□□□□□ -0.5
EWSR1-207ENST00000406548 BAHCC1Q9P281 2608 aa11.94□□□□□ -0.5
EWSR1-207ENST00000406548 FAM168BA1KXE4 195 aa11.94□□□□□ -0.5
EWSR1-207ENST00000406548 KRTAP4-16G5E9R7 235 aaPredicted RBP11.94□□□□□ -0.5
EWSR1-207ENST00000406548 IGLV1-50A0A075B6I6 118 aa11.93□□□□□ -0.5
EWSR1-207ENST00000406548 Q9BRP9 147 aa11.93□□□□□ -0.5
EWSR1-207ENST00000406548 LINC00588Q9Y4M8 146 aa11.93□□□□□ -0.5
EWSR1-207ENST00000406548 CASC10Q5T4H9 136 aa11.92□□□□□ -0.5
EWSR1-207ENST00000406548 SPRR1AP35321 89 aa11.91□□□□□ -0.5
EWSR1-207ENST00000406548 ETDCA0A1B0GVM5 59 aa11.91□□□□□ -0.5
EWSR1-207ENST00000406548 F8WEM9 126 aa11.91□□□□□ -0.5
EWSR1-207ENST00000406548 DNAH3Q8TD57 4116 aa11.9□□□□□ -0.5
EWSR1-207ENST00000406548 SERP1Q9Y6X1 66 aa11.9□□□□□ -0.51
EWSR1-207ENST00000406548 NDUFC1O43677 76 aa11.88□□□□□ -0.51
EWSR1-207ENST00000406548 FUSP35637 526 aaKnown RBP eCLIP11.88□□□□□ -0.512e-6■■□□□ 12.8
EWSR1-207ENST00000406548 C5orf47Q569G3 176 aa11.88□□□□□ -0.51
EWSR1-207ENST00000406548 Q5XG85 94 aa11.88□□□□□ -0.51
EWSR1-207ENST00000406548 KRTAP7-1Q8IUC3 87 aa11.88□□□□□ -0.51
EWSR1-207ENST00000406548 FBN1P35555 2871 aaKnown RBP11.88□□□□□ -0.51
EWSR1-207ENST00000406548 EPM2AB3EWF7 344 aa11.88□□□□□ -0.51
EWSR1-207ENST00000406548 TNP2Q05952 138 aa11.88□□□□□ -0.51
EWSR1-207ENST00000406548 A0A1B0GW54 56 aa11.87□□□□□ -0.51
EWSR1-207ENST00000406548 DNAH1Q9P2D7 4330 aa11.87□□□□□ -0.51
EWSR1-207ENST00000406548 ERC2-IT1O76042 136 aa11.87□□□□□ -0.51
EWSR1-207ENST00000406548 ST20-AS1Q8NBB2 130 aa11.87□□□□□ -0.51
EWSR1-207ENST00000406548 A0A1W2PNM2 257 aa11.86□□□□□ -0.51
EWSR1-207ENST00000406548 TMEM254Q8TBM7 123 aa11.86□□□□□ -0.51
EWSR1-207ENST00000406548 C1orf137Q5JT78 98 aa11.85□□□□□ -0.51
EWSR1-207ENST00000406548 MRPL55Q7Z7F7 128 aaKnown RBP11.85□□□□□ -0.51
EWSR1-207ENST00000406548 OCR1Q9BZK8 76 aa11.84□□□□□ -0.51
EWSR1-207ENST00000406548 C4orf26Q17RF5 130 aa11.83□□□□□ -0.52
EWSR1-207ENST00000406548 Q8NBF4 154 aa11.83□□□□□ -0.52
EWSR1-207ENST00000406548 STAB1Q9NY15 2570 aa11.82□□□□□ -0.52
EWSR1-207ENST00000406548 UBE2BP63146 152 aa11.8□□□□□ -0.52
EWSR1-207ENST00000406548 ATP5EP56381 51 aaPredicted RBP11.79□□□□□ -0.52
EWSR1-207ENST00000406548 SPRR4Q96PI1 79 aa11.79□□□□□ -0.52
EWSR1-207ENST00000406548 REG3GQ6UW15 175 aa11.78□□□□□ -0.52
EWSR1-207ENST00000406548 HRCT1Q6UXD1 115 aa11.78□□□□□ -0.52
EWSR1-207ENST00000406548 A0A0U1RQV1 116 aa11.77□□□□□ -0.53
EWSR1-207ENST00000406548 PRB2P02812 416 aaPredicted RBP11.76□□□□□ -0.53
EWSR1-207ENST00000406548 SMIM29Q86T20 159 aa11.75□□□□□ -0.53
EWSR1-207ENST00000406548 MAST4O15021 2626 aa11.75□□□□□ -0.53
EWSR1-207ENST00000406548 NOTCH1P46531 2555 aa11.74□□□□□ -0.53
EWSR1-207ENST00000406548 HUWE1Q7Z6Z7 4374 aaKnown RBP11.71□□□□□ -0.53
EWSR1-207ENST00000406548 DSCR10P59022 87 aa11.71□□□□□ -0.54
EWSR1-207ENST00000406548 LINC00476Q8WZB0 136 aa11.71□□□□□ -0.54
EWSR1-207ENST00000406548 SMIM26A0A096LP01 95 aa11.7□□□□□ -0.54
EWSR1-207ENST00000406548 FAM30AQ9NZY2 134 aa11.7□□□□□ -0.54
EWSR1-207ENST00000406548 HIGD2AQ9BW72 106 aa11.7□□□□□ -0.54
EWSR1-207ENST00000406548 A0A096LNI7 61 aa11.68□□□□□ -0.54
EWSR1-207ENST00000406548 K7EIL1 84 aa11.68□□□□□ -0.54
EWSR1-207ENST00000406548 K7EQZ3 153 aa11.67□□□□□ -0.54
EWSR1-207ENST00000406548 FP248Q71RG6 208 aaPredicted RBP11.67□□□□□ -0.54
EWSR1-207ENST00000406548 COL6A5A8TX70 2615 aa11.66□□□□□ -0.54
EWSR1-207ENST00000406548 C16orf90A8MZG2 172 aa11.66□□□□□ -0.54
EWSR1-207ENST00000406548 IGKV2-24A0A0C4DH68 120 aa11.66□□□□□ -0.54
EWSR1-207ENST00000406548 LCE6AA0A183 80 aa11.66□□□□□ -0.54
EWSR1-207ENST00000406548 PRLHP81277 87 aa11.65□□□□□ -0.54
EWSR1-207ENST00000406548 IGFL1Q6UW32 110 aa11.65□□□□□ -0.54
EWSR1-207ENST00000406548 KRTAP1-5Q9BYS1 174 aa11.65□□□□□ -0.54
EWSR1-207ENST00000406548 CNBPP62633 177 aaKnown RBP11.64□□□□□ -0.55
EWSR1-207ENST00000406548 A0A1W2PNN7 141 aa11.63□□□□□ -0.55
EWSR1-207ENST00000406548 A0A0G2JQZ4 141 aa11.63□□□□□ -0.55
EWSR1-207ENST00000406548 DNAH10Q8IVF4 4471 aa11.62□□□□□ -0.55
EWSR1-207ENST00000406548 NBEAL1Q6ZS30 2694 aa11.61□□□□□ -0.55
EWSR1-207ENST00000406548 IGLV8-61A0A075B6I0 122 aa11.6□□□□□ -0.55
EWSR1-207ENST00000406548 PSCAO43653 123 aa11.6□□□□□ -0.55
EWSR1-207ENST00000406548 LINC00474Q9P2X8 69 aa11.6□□□□□ -0.55
EWSR1-207ENST00000406548 HCG22E2RYF7 251 aa11.59□□□□□ -0.55
EWSR1-207ENST00000406548 A0A087WSZ3 146 aa11.56□□□□□ -0.56
EWSR1-207ENST00000406548 FAM229BQ4G0N7 80 aa11.56□□□□□ -0.56
EWSR1-207ENST00000406548 LYSTQ99698 3801 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms