RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 TNXBP22105 4242 aa12.39□□□□□ -0.43
PDGFA-204ENST00000405692 KRTAP4-16G5E9R7 235 aaPredicted RBP12.38□□□□□ -0.43
PDGFA-204ENST00000405692 IFITM1P13164 125 aa12.38□□□□□ -0.43
PDGFA-204ENST00000405692 ZNF706Q9Y5V0 76 aaPredicted RBP12.38□□□□□ -0.43
PDGFA-204ENST00000405692 TRAV23DV6A0A075B6W5 121 aa12.37□□□□□ -0.43
PDGFA-204ENST00000405692 PPDPFQ9H3Y8 114 aa12.37□□□□□ -0.43
PDGFA-204ENST00000405692 OR13C6PQ8NH95 151 aa12.35□□□□□ -0.43
PDGFA-204ENST00000405692 TYMSOSQ8TAI1 123 aa12.35□□□□□ -0.43
PDGFA-204ENST00000405692 A0A087X002 238 aa12.34□□□□□ -0.43
PDGFA-204ENST00000405692 B5MCH6 92 aa12.34□□□□□ -0.43
PDGFA-204ENST00000405692 HINT1P49773 126 aaPredicted RBP12.34□□□□□ -0.43
PDGFA-204ENST00000405692 JOSD1Q15040 202 aaPredicted RBP12.33□□□□□ -0.44
PDGFA-204ENST00000405692 ANAPC11Q9NYG5 84 aa12.33□□□□□ -0.44
PDGFA-204ENST00000405692 ZNF73O43830 326 aaPredicted RBP12.32□□□□□ -0.44
PDGFA-204ENST00000405692 SMCR5Q8TEV8 140 aa12.32□□□□□ -0.44
PDGFA-204ENST00000405692 Q6ZRX8 168 aa12.31□□□□□ -0.44
PDGFA-204ENST00000405692 SPRR4Q96PI1 79 aa12.31□□□□□ -0.44
PDGFA-204ENST00000405692 MUSTN1Q8IVN3 82 aa12.29□□□□□ -0.44
PDGFA-204ENST00000405692 KRTAP13-2Q52LG2 175 aa12.26□□□□□ -0.45
PDGFA-204ENST00000405692 Q9BRP9 147 aa12.24□□□□□ -0.45
PDGFA-204ENST00000405692 TRAV13-2A0A0B4J235 113 aa12.22□□□□□ -0.45
PDGFA-204ENST00000405692 A6NDN8 102 aa12.22□□□□□ -0.45
PDGFA-204ENST00000405692 COX8AP10176 69 aa12.22□□□□□ -0.45
PDGFA-204ENST00000405692 ERC2-IT1O76042 136 aa12.2□□□□□ -0.46
PDGFA-204ENST00000405692 LINC00483Q53H64 154 aa12.2□□□□□ -0.46
PDGFA-204ENST00000405692 GAGE2AQ6NT46 116 aa12.2□□□□□ -0.46
PDGFA-204ENST00000405692 LINC00304Q8N9R0 145 aa12.2□□□□□ -0.46
PDGFA-204ENST00000405692 DHRS4-AS1Q9P1J3 65 aa12.2□□□□□ -0.46
PDGFA-204ENST00000405692 DLEU1O43261 78 aa12.19□□□□□ -0.46
PDGFA-204ENST00000405692 VAMP8Q9BV40 100 aa12.19□□□□□ -0.46
PDGFA-204ENST00000405692 HMCN2Q8NDA2 5059 aa12.18□□□□□ -0.46
PDGFA-204ENST00000405692 COX7BP24311 80 aa12.18□□□□□ -0.46
PDGFA-204ENST00000405692 CTAG1AP78358 180 aa12.18□□□□□ -0.46
PDGFA-204ENST00000405692 C6orf99Q4VX62 202 aa12.18□□□□□ -0.46
PDGFA-204ENST00000405692 TRBV7-6A0A0J9YX20 115 aa12.17□□□□□ -0.46
PDGFA-204ENST00000405692 TSPAN13O95857 204 aa12.17□□□□□ -0.46
PDGFA-204ENST00000405692 SPATA45Q537H7 98 aa12.17□□□□□ -0.46
PDGFA-204ENST00000405692 C3orf22Q8N5N4 141 aa12.17□□□□□ -0.46
PDGFA-204ENST00000405692 PAM16Q9Y3D7 125 aa12.17□□□□□ -0.46
PDGFA-204ENST00000405692 ELOF1P60002 83 aaKnown RBP12.16□□□□□ -0.46
PDGFA-204ENST00000405692 HIST1H4GQ99525 98 aa12.16□□□□□ -0.46
PDGFA-204ENST00000405692 SPAG11AQ6PDA7 123 aa12.14□□□□□ -0.47
PDGFA-204ENST00000405692 A0A1B0GWB2 263 aa12.13□□□□□ -0.47
PDGFA-204ENST00000405692 A4D1N5 150 aa12.13□□□□□ -0.47
PDGFA-204ENST00000405692 C14orf144Q96I85 54 aa12.13□□□□□ -0.47
PDGFA-204ENST00000405692 TMA7Q9Y2S6 64 aaKnown RBP12.13□□□□□ -0.47
PDGFA-204ENST00000405692 C4orf48Q5BLP8 95 aa12.12□□□□□ -0.47
PDGFA-204ENST00000405692 SLC25A34Q6PIV7 304 aa12.11□□□□□ -0.47
PDGFA-204ENST00000405692 HIGD1BQ9P298 99 aa12.1□□□□□ -0.47
PDGFA-204ENST00000405692 PRR4Q16378 134 aa12.09□□□□□ -0.47
PDGFA-204ENST00000405692 IGLV9-49A0A0B4J1Y8 123 aa12.08□□□□□ -0.48
PDGFA-204ENST00000405692 SSBP3-AS1Q7Z2R9 100 aa12.08□□□□□ -0.48
PDGFA-204ENST00000405692 ST20-AS1Q8NBB2 130 aa12.08□□□□□ -0.48
PDGFA-204ENST00000405692 SMIM11BQ8TCY0 68 aa12.08□□□□□ -0.48
PDGFA-204ENST00000405692 VAMP3Q15836 100 aa12.07□□□□□ -0.48
PDGFA-204ENST00000405692 Q8NBF4 154 aa12.07□□□□□ -0.48
PDGFA-204ENST00000405692 NHP2Q9NX24 153 aaKnown RBP12.07□□□□□ -0.48
PDGFA-204ENST00000405692 SPRR1BP22528 89 aa12.05□□□□□ -0.48
PDGFA-204ENST00000405692 MOBPQ13875 183 aa12.05□□□□□ -0.48
PDGFA-204ENST00000405692 PYY3Q5JQD4 70 aa12.05□□□□□ -0.48
PDGFA-204ENST00000405692 TAL2Q16559 108 aa12.03□□□□□ -0.48
PDGFA-204ENST00000405692 C9orf153Q5TBE3 101 aa12.03□□□□□ -0.48
PDGFA-204ENST00000405692 SLC25A20O43772 301 aa12.02□□□□□ -0.49
PDGFA-204ENST00000405692 SPINK1P00995 79 aa12.02□□□□□ -0.49
PDGFA-204ENST00000405692 LAMTOR3Q9UHA4 124 aa12.02□□□□□ -0.49
PDGFA-204ENST00000405692 C12orf57Q99622 126 aa12.01□□□□□ -0.49
PDGFA-204ENST00000405692 TEX49A0A1B0GTD5 131 aa12□□□□□ -0.49
PDGFA-204ENST00000405692 C2orf91Q6ZV80 131 aa12□□□□□ -0.49
PDGFA-204ENST00000405692 DEFB105AQ8NG35 78 aa11.99□□□□□ -0.49
PDGFA-204ENST00000405692 RAB37Q96AX2 223 aa11.99□□□□□ -0.49
PDGFA-204ENST00000405692 TMEM238LA0A1B0GVL6 79 aa11.97□□□□□ -0.49
PDGFA-204ENST00000405692 A6NJY4 79 aa11.97□□□□□ -0.49
PDGFA-204ENST00000405692 BVES-AS1Q5T3Y7 98 aa11.97□□□□□ -0.49
PDGFA-204ENST00000405692 CFC1BP0CG36 223 aa11.95□□□□□ -0.5
PDGFA-204ENST00000405692 CFC1P0CG37 223 aa11.95□□□□□ -0.5
PDGFA-204ENST00000405692 RPS29P62273 56 aaKnown RBP11.95□□□□□ -0.5
PDGFA-204ENST00000405692 CEND1Q8N111 149 aa11.95□□□□□ -0.5
PDGFA-204ENST00000405692 IGLV5-48A0A075B6I7 105 aa11.94□□□□□ -0.5
PDGFA-204ENST00000405692 A0A0B4J2C4 111 aa11.94□□□□□ -0.5
PDGFA-204ENST00000405692 LINC00575Q6W349 94 aa11.94□□□□□ -0.5
PDGFA-204ENST00000405692 RETNLBQ9BQ08 111 aa11.94□□□□□ -0.5
PDGFA-204ENST00000405692 hADV29S1A0JD25 119 aa11.91□□□□□ -0.5
PDGFA-204ENST00000405692 H7C2G1 150 aa11.91□□□□□ -0.5
PDGFA-204ENST00000405692 Q1RN00 199 aa11.9□□□□□ -0.5
PDGFA-204ENST00000405692 LINC01547P58512 204 aaPredicted RBP11.89□□□□□ -0.51
PDGFA-204ENST00000405692 UQCR10Q9UDW1 63 aa11.89□□□□□ -0.51
PDGFA-204ENST00000405692 IGLV7-46A0A075B6I9 117 aa11.88□□□□□ -0.51
PDGFA-204ENST00000405692 SNCGO76070 127 aa11.88□□□□□ -0.51
PDGFA-204ENST00000405692 LRP2P98164 4655 aa11.88□□□□□ -0.51
PDGFA-204ENST00000405692 HSD52Q0P140 79 aa11.88□□□□□ -0.51
PDGFA-204ENST00000405692 FP248Q71RG6 208 aaPredicted RBP11.88□□□□□ -0.51
PDGFA-204ENST00000405692 PRO1933Q9H354 126 aa11.87□□□□□ -0.51
PDGFA-204ENST00000405692 SMIM29Q86T20 159 aa11.86□□□□□ -0.51
PDGFA-204ENST00000405692 Q8N377 158 aa11.86□□□□□ -0.51
PDGFA-204ENST00000405692 PRO1854Q9UHT4 67 aa11.86□□□□□ -0.51
PDGFA-204ENST00000405692 H0YGX0 51 aa11.85□□□□□ -0.51
PDGFA-204ENST00000405692 Q6ZQY7 126 aa11.85□□□□□ -0.51
PDGFA-204ENST00000405692 FXYD2P54710 66 aa11.84□□□□□ -0.51
PDGFA-204ENST00000405692 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.84□□□□□ -0.51
PDGFA-204ENST00000405692 F8WEM9 126 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms