RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 HIGD2BQ4VC39 106 aa10.5□□□□□ -0.73
CHRFAM7A-203ENST00000401522 SERP2Q8N6R1 65 aa10.5□□□□□ -0.73
CHRFAM7A-203ENST00000401522 COX7BP24311 80 aa10.49□□□□□ -0.73
CHRFAM7A-203ENST00000401522 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.49□□□□□ -0.73
CHRFAM7A-203ENST00000401522 VPREB1P12018 145 aa10.48□□□□□ -0.73
CHRFAM7A-203ENST00000401522 UBE2DNLQ8IWF7 75 aa10.48□□□□□ -0.73
CHRFAM7A-203ENST00000401522 F8WDY8 70 aa10.48□□□□□ -0.73
CHRFAM7A-203ENST00000401522 M0R378 163 aa10.48□□□□□ -0.73
CHRFAM7A-203ENST00000401522 DSCR8Q96T75 97 aa10.48□□□□□ -0.73
CHRFAM7A-203ENST00000401522 LYSTQ99698 3801 aa10.48□□□□□ -0.73
CHRFAM7A-203ENST00000401522 ELOF1P60002 83 aaKnown RBP10.47□□□□□ -0.73
CHRFAM7A-203ENST00000401522 C15orf56Q8N910 161 aa10.47□□□□□ -0.73
CHRFAM7A-203ENST00000401522 Q6ZRU5 148 aa10.46□□□□□ -0.73
CHRFAM7A-203ENST00000401522 SMIM20Q8N5G0 67 aa10.46□□□□□ -0.73
CHRFAM7A-203ENST00000401522 NDUFC2-KCTD14E9PQ53 114 aa10.46□□□□□ -0.74
CHRFAM7A-203ENST00000401522 DNAH10OSP0CZ25 163 aa10.46□□□□□ -0.74
CHRFAM7A-203ENST00000401522 C1orf43Q9BWL3 253 aa10.45□□□□□ -0.74
CHRFAM7A-203ENST00000401522 LINC01556Q5JQF7 62 aa10.45□□□□□ -0.74
CHRFAM7A-203ENST00000401522 LINC00476Q8WZB0 136 aa10.43□□□□□ -0.74
CHRFAM7A-203ENST00000401522 FAM19A1Q7Z5A9 133 aa10.42□□□□□ -0.74
CHRFAM7A-203ENST00000401522 TRBV7-4A0A0J9YYF1 115 aa10.41□□□□□ -0.74
CHRFAM7A-203ENST00000401522 LY6G6CO95867 125 aa10.41□□□□□ -0.74
CHRFAM7A-203ENST00000401522 IGKV2D-24A0A075B6R9 120 aa10.39□□□□□ -0.75
CHRFAM7A-203ENST00000401522 M0R2N4 97 aa10.39□□□□□ -0.75
CHRFAM7A-203ENST00000401522 Q6ZVQ6 151 aa10.39□□□□□ -0.75
CHRFAM7A-203ENST00000401522 LINC00528Q8N1L1 170 aa10.39□□□□□ -0.75
CHRFAM7A-203ENST00000401522 LINC01547P58512 204 aaPredicted RBP10.39□□□□□ -0.75
CHRFAM7A-203ENST00000401522 SYCNQ0VAF6 134 aa10.39□□□□□ -0.75
CHRFAM7A-203ENST00000401522 BCE1O60756 84 aa10.37□□□□□ -0.75
CHRFAM7A-203ENST00000401522 CXCL6P80162 114 aa10.37□□□□□ -0.75
CHRFAM7A-203ENST00000401522 Q6ZRP5 223 aa10.37□□□□□ -0.75
CHRFAM7A-203ENST00000401522 DNAH1Q9P2D7 4330 aa10.36□□□□□ -0.75
CHRFAM7A-203ENST00000401522 NBDYA0A0U1RRE5 68 aa10.36□□□□□ -0.75
CHRFAM7A-203ENST00000401522 VPS13DQ5THJ4 4388 aa10.36□□□□□ -0.75
CHRFAM7A-203ENST00000401522 TMEM258P61165 79 aa10.35□□□□□ -0.75
CHRFAM7A-203ENST00000401522 HAMPP81172 84 aa10.35□□□□□ -0.75
CHRFAM7A-203ENST00000401522 KRTAP1-5Q9BYS1 174 aa10.35□□□□□ -0.75
CHRFAM7A-203ENST00000401522 LCE6AA0A183 80 aa10.34□□□□□ -0.75
CHRFAM7A-203ENST00000401522 CYSTM1Q9H1C7 97 aa10.34□□□□□ -0.75
CHRFAM7A-203ENST00000401522 Q6ZR54 194 aa10.33□□□□□ -0.76
CHRFAM7A-203ENST00000401522 NKAPP1Q8N9T2 125 aa10.33□□□□□ -0.76
CHRFAM7A-203ENST00000401522 KCNQ1DNQ9H478 68 aa10.33□□□□□ -0.76
CHRFAM7A-203ENST00000401522 ALMS1Q8TCU4 4167 aa10.32□□□□□ -0.76
CHRFAM7A-203ENST00000401522 J3KT08 172 aa10.31□□□□□ -0.76
CHRFAM7A-203ENST00000401522 TLX1NBP0CAT3 122 aa10.31□□□□□ -0.76
CHRFAM7A-203ENST00000401522 PLA2G2DQ9UNK4 145 aa10.31□□□□□ -0.76
CHRFAM7A-203ENST00000401522 RPS28P62857 69 aaKnown RBP10.3□□□□□ -0.76
CHRFAM7A-203ENST00000401522 KMT2AQ03164 3969 aa10.3□□□□□ -0.76
CHRFAM7A-203ENST00000401522 TRAV7A0A075B6U4 112 aa10.29□□□□□ -0.76
CHRFAM7A-203ENST00000401522 C7orf33Q8WU49 177 aa10.29□□□□□ -0.76
CHRFAM7A-203ENST00000401522 SERTAD4-AS1Q5TG53 156 aa10.28□□□□□ -0.76
CHRFAM7A-203ENST00000401522 IGLV5-37A0A075B6J1 123 aa10.25□□□□□ -0.77
CHRFAM7A-203ENST00000401522 RMI2Q96E14 147 aa10.25□□□□□ -0.77
CHRFAM7A-203ENST00000401522 DHRS4-AS1Q9P1J3 65 aa10.25□□□□□ -0.77
CHRFAM7A-203ENST00000401522 LOC107984640A0A0U1RRK4 108 aa10.24□□□□□ -0.77
CHRFAM7A-203ENST00000401522 PRYO14603 147 aa10.24□□□□□ -0.77
CHRFAM7A-203ENST00000401522 C20orf197Q8N268 126 aa10.23□□□□□ -0.77
CHRFAM7A-203ENST00000401522 DPH3Q96FX2 82 aa10.23□□□□□ -0.77
CHRFAM7A-203ENST00000401522 DNAH6Q9C0G6 4158 aa10.22□□□□□ -0.77
CHRFAM7A-203ENST00000401522 C1orf134Q5TEV5 83 aa10.22□□□□□ -0.77
CHRFAM7A-203ENST00000401522 Q6ZRN7 208 aaPredicted RBP10.22□□□□□ -0.77
CHRFAM7A-203ENST00000401522 HYDINQ4G0P3 5121 aa10.22□□□□□ -0.77
CHRFAM7A-203ENST00000401522 Q6ZRX8 168 aa10.21□□□□□ -0.77
CHRFAM7A-203ENST00000401522 Q8N377 158 aa10.21□□□□□ -0.77
CHRFAM7A-203ENST00000401522 KMT2CQ8NEZ4 4911 aaKnown RBP10.21□□□□□ -0.78
CHRFAM7A-203ENST00000401522 SCXQ7RTU7 201 aa10.21□□□□□ -0.78
CHRFAM7A-203ENST00000401522 IGLV1-50A0A075B6I6 118 aa10.2□□□□□ -0.78
CHRFAM7A-203ENST00000401522 IGLV5-48A0A075B6I7 105 aa10.2□□□□□ -0.78
CHRFAM7A-203ENST00000401522 SACSQ9NZJ4 4579 aa10.19□□□□□ -0.78
CHRFAM7A-203ENST00000401522 KRTAP4-16G5E9R7 235 aaPredicted RBP10.19□□□□□ -0.78
CHRFAM7A-203ENST00000401522 SPRR1AP35321 89 aa10.19□□□□□ -0.78
CHRFAM7A-203ENST00000401522 DEFB105AQ8NG35 78 aa10.19□□□□□ -0.78
CHRFAM7A-203ENST00000401522 NREPQ16612 68 aa10.19□□□□□ -0.78
CHRFAM7A-203ENST00000401522 ETDCA0A1B0GVM5 59 aa10.18□□□□□ -0.78
CHRFAM7A-203ENST00000401522 A0A1B0GW54 56 aa10.18□□□□□ -0.78
CHRFAM7A-203ENST00000401522 PSCAO43653 123 aa10.17□□□□□ -0.78
CHRFAM7A-203ENST00000401522 FAM168BA1KXE4 195 aa10.17□□□□□ -0.78
CHRFAM7A-203ENST00000401522 RPL37AP8A6NKH3 93 aa10.17□□□□□ -0.78
CHRFAM7A-203ENST00000401522 KLKP1Q107X0 134 aa10.16□□□□□ -0.78
CHRFAM7A-203ENST00000401522 Q9BRP9 147 aa10.16□□□□□ -0.78
CHRFAM7A-203ENST00000401522 RTL8CO15255 209 aa10.15□□□□□ -0.79
CHRFAM7A-203ENST00000401522 FAM19A5Q7Z5A7 132 aaPredicted RBP10.15□□□□□ -0.79
CHRFAM7A-203ENST00000401522 MRPL55Q7Z7F7 128 aaKnown RBP10.14□□□□□ -0.79
CHRFAM7A-203ENST00000401522 IGKV4-1P06312 121 aa10.13□□□□□ -0.79
CHRFAM7A-203ENST00000401522 FUSP35637 526 aaKnown RBP eCLIP10.13□□□□□ -0.79
CHRFAM7A-203ENST00000401522 KRTAP7-1Q8IUC3 87 aa10.13□□□□□ -0.79
CHRFAM7A-203ENST00000401522 LRCOL1A6NCL2 159 aa10.13□□□□□ -0.79
CHRFAM7A-203ENST00000401522 H7BZZ5 65 aa10.13□□□□□ -0.79
CHRFAM7A-203ENST00000401522 BPY2O14599 106 aa10.13□□□□□ -0.79
CHRFAM7A-203ENST00000401522 RYR2Q92736 4967 aa10.13□□□□□ -0.79
CHRFAM7A-203ENST00000401522 DNAH2Q9P225 4427 aa10.13□□□□□ -0.79
CHRFAM7A-203ENST00000401522 FAM236DA0A1B0GTK5 79 aa10.12□□□□□ -0.79
CHRFAM7A-203ENST00000401522 FAM236CP0DP71 79 aa10.12□□□□□ -0.79
CHRFAM7A-203ENST00000401522 TNP2Q05952 138 aa10.12□□□□□ -0.79
CHRFAM7A-203ENST00000401522 DNAH10Q8IVF4 4471 aa10.11□□□□□ -0.79
CHRFAM7A-203ENST00000401522 ERC2-IT1O76042 136 aa10.09□□□□□ -0.79
CHRFAM7A-203ENST00000401522 C1orf137Q5JT78 98 aa10.09□□□□□ -0.79
CHRFAM7A-203ENST00000401522 A0A087WTM6 91 aa10.09□□□□□ -0.79
CHRFAM7A-203ENST00000401522 NDUFC1O43677 76 aa10.09□□□□□ -0.79
CHRFAM7A-203ENST00000401522 Q8N9L7 120 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms