RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 SERTAD4-AS1Q5TG53 156 aa8.38□□□□□ -1.07
PPP4R1-202ENST00000400555 ATP5EP2Q5VTU8 51 aa8.37□□□□□ -1.07
PPP4R1-202ENST00000400555 RMI2Q96E14 147 aa8.37□□□□□ -1.07
PPP4R1-202ENST00000400555 BPY2O14599 106 aa8.36□□□□□ -1.07
PPP4R1-202ENST00000400555 C7orf33Q8WU49 177 aa8.36□□□□□ -1.07
PPP4R1-202ENST00000400555 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.35□□□□□ -1.07
PPP4R1-202ENST00000400555 ELOF1P60002 83 aaKnown RBP8.35□□□□□ -1.07
PPP4R1-202ENST00000400555 TENM2Q9NT68 2774 aa8.35□□□□□ -1.07
PPP4R1-202ENST00000400555 KRTAP24-1Q3LI83 254 aa8.35□□□□□ -1.07
PPP4R1-202ENST00000400555 A0A0G2JQZ4 141 aa8.35□□□□□ -1.07
PPP4R1-202ENST00000400555 A0A1W2PNN7 141 aa8.35□□□□□ -1.07
PPP4R1-202ENST00000400555 PSCAO43653 123 aa8.35□□□□□ -1.07
PPP4R1-202ENST00000400555 ST20-AS1Q8NBB2 130 aa8.34□□□□□ -1.07
PPP4R1-202ENST00000400555 TM2D3Q9BRN9 247 aa8.34□□□□□ -1.07
PPP4R1-202ENST00000400555 PDE6GP18545 87 aa8.33□□□□□ -1.08
PPP4R1-202ENST00000400555 TMEM258P61165 79 aa8.33□□□□□ -1.08
PPP4R1-202ENST00000400555 A0A096LNI7 61 aa8.32□□□□□ -1.08
PPP4R1-202ENST00000400555 DEFB116Q30KQ4 102 aa8.32□□□□□ -1.08
PPP4R1-202ENST00000400555 GVQW2A0A096LPI5 108 aaPredicted RBP8.32□□□□□ -1.08
PPP4R1-202ENST00000400555 LOC110117498A0A087WWA1 95 aa8.31□□□□□ -1.08
PPP4R1-202ENST00000400555 F8WEM9 126 aa8.31□□□□□ -1.08
PPP4R1-202ENST00000400555 HIGD2AQ9BW72 106 aa8.31□□□□□ -1.08
PPP4R1-202ENST00000400555 UBE2DNLQ8IWF7 75 aa8.3□□□□□ -1.08
PPP4R1-202ENST00000400555 LINC00528Q8N1L1 170 aa8.3□□□□□ -1.08
PPP4R1-202ENST00000400555 FAM236DA0A1B0GTK5 79 aa8.3□□□□□ -1.08
PPP4R1-202ENST00000400555 FAM236CP0DP71 79 aa8.3□□□□□ -1.08
PPP4R1-202ENST00000400555 FUSP35637 526 aaKnown RBP eCLIP8.3□□□□□ -1.08
PPP4R1-202ENST00000400555 TRAV7A0A075B6U4 112 aa8.29□□□□□ -1.08
PPP4R1-202ENST00000400555 LINC01556Q5JQF7 62 aa8.29□□□□□ -1.08
PPP4R1-202ENST00000400555 HRCT1Q6UXD1 115 aa8.29□□□□□ -1.08
PPP4R1-202ENST00000400555 LINC00588Q9Y4M8 146 aa8.29□□□□□ -1.08
PPP4R1-202ENST00000400555 C4orf26Q17RF5 130 aa8.28□□□□□ -1.08
PPP4R1-202ENST00000400555 FAM30AQ9NZY2 134 aa8.28□□□□□ -1.08
PPP4R1-202ENST00000400555 TRBV7-4A0A0J9YYF1 115 aa8.26□□□□□ -1.09
PPP4R1-202ENST00000400555 KRTAP26-1Q6PEX3 210 aa8.26□□□□□ -1.09
PPP4R1-202ENST00000400555 PRLHP81277 87 aa8.26□□□□□ -1.09
PPP4R1-202ENST00000400555 C1orf137Q5JT78 98 aa8.26□□□□□ -1.09
PPP4R1-202ENST00000400555 Q8N377 158 aa8.25□□□□□ -1.09
PPP4R1-202ENST00000400555 SVIPQ8NHG7 77 aa8.25□□□□□ -1.09
PPP4R1-202ENST00000400555 ERC2-IT1O76042 136 aa8.24□□□□□ -1.09
PPP4R1-202ENST00000400555 PRR4Q16378 134 aa8.24□□□□□ -1.09
PPP4R1-202ENST00000400555 H3BQ85 93 aa8.24□□□□□ -1.09
PPP4R1-202ENST00000400555 OXTP01178 125 aa8.23□□□□□ -1.09
PPP4R1-202ENST00000400555 SRRM2Q9UQ35 2752 aaKnown RBP8.23□□□□□ -1.09
PPP4R1-202ENST00000400555 CXCL6P80162 114 aa8.23□□□□□ -1.09
PPP4R1-202ENST00000400555 LRCOL1A6NCL2 159 aa8.22□□□□□ -1.09
PPP4R1-202ENST00000400555 H3BNG1 76 aa8.22□□□□□ -1.09
PPP4R1-202ENST00000400555 MRPL55Q7Z7F7 128 aaKnown RBP8.22□□□□□ -1.09
PPP4R1-202ENST00000400555 MPLKIPQ8TAP9 179 aa8.21□□□□□ -1.1
PPP4R1-202ENST00000400555 CSMD3Q7Z407 3707 aa8.2□□□□□ -1.1
PPP4R1-202ENST00000400555 CHTF8P0CG12 524 aa8.2□□□□□ -1.1
PPP4R1-202ENST00000400555 Q6ZRX8 168 aa8.2□□□□□ -1.1
PPP4R1-202ENST00000400555 WFDC13Q8IUB5 93 aa8.2□□□□□ -1.1
PPP4R1-202ENST00000400555 Q9BRP9 147 aa8.2□□□□□ -1.1
PPP4R1-202ENST00000400555 TMEM254Q8TBM7 123 aa8.19□□□□□ -1.1
PPP4R1-202ENST00000400555 DHRS4-AS1Q9P1J3 65 aa8.19□□□□□ -1.1
PPP4R1-202ENST00000400555 H7BZZ5 65 aa8.19□□□□□ -1.1
PPP4R1-202ENST00000400555 KCNQ1DNQ9H478 68 aa8.19□□□□□ -1.1
PPP4R1-202ENST00000400555 DNAH10OSP0CZ25 163 aa8.19□□□□□ -1.1
PPP4R1-202ENST00000400555 SMIM29Q86T20 159 aa8.19□□□□□ -1.1
PPP4R1-202ENST00000400555 TRBV7-6A0A0J9YX20 115 aa8.17□□□□□ -1.1
PPP4R1-202ENST00000400555 A0A1W2PNM2 257 aa8.16□□□□□ -1.1
PPP4R1-202ENST00000400555 REG3GQ6UW15 175 aa8.16□□□□□ -1.1
PPP4R1-202ENST00000400555 IGLV1-50A0A075B6I6 118 aa8.16□□□□□ -1.1
PPP4R1-202ENST00000400555 IGKV4-1P06312 121 aa8.16□□□□□ -1.1
PPP4R1-202ENST00000400555 A0A087WSZ3 146 aa8.14□□□□□ -1.11
PPP4R1-202ENST00000400555 RPS28P62857 69 aaKnown RBP8.14□□□□□ -1.11
PPP4R1-202ENST00000400555 WIPF1O43516 503 aa8.14□□□□□ -1.11
PPP4R1-202ENST00000400555 LINC00474Q9P2X8 69 aa8.14□□□□□ -1.11
PPP4R1-202ENST00000400555 K7EIL1 84 aa8.13□□□□□ -1.11
PPP4R1-202ENST00000400555 UBE2AP49459 152 aa8.13□□□□□ -1.11
PPP4R1-202ENST00000400555 RPL37AP61513 92 aaKnown RBP8.12□□□□□ -1.11
PPP4R1-202ENST00000400555 PRYO14603 147 aa8.12□□□□□ -1.11
PPP4R1-202ENST00000400555 C5orf47Q569G3 176 aa8.12□□□□□ -1.11
PPP4R1-202ENST00000400555 PHF5AQ7RTV0 110 aaKnown RBP8.12□□□□□ -1.11
PPP4R1-202ENST00000400555 LINC00476Q8WZB0 136 aa8.12□□□□□ -1.11
PPP4R1-202ENST00000400555 K7EQZ3 153 aa8.11□□□□□ -1.11
PPP4R1-202ENST00000400555 Q8NBF4 154 aa8.1□□□□□ -1.11
PPP4R1-202ENST00000400555 SERP1Q9Y6X1 66 aa8.1□□□□□ -1.11
PPP4R1-202ENST00000400555 KLKP1Q107X0 134 aa8.09□□□□□ -1.11
PPP4R1-202ENST00000400555 KRTAP7-1Q8IUC3 87 aa8.09□□□□□ -1.11
PPP4R1-202ENST00000400555 COL7A1Q02388 2944 aa8.09□□□□□ -1.11
PPP4R1-202ENST00000400555 KRTAP1-5Q9BYS1 174 aa8.08□□□□□ -1.12
PPP4R1-202ENST00000400555 H0Y9J4 135 aa8.06□□□□□ -1.12
PPP4R1-202ENST00000400555 IGLV5-48A0A075B6I7 105 aa8.05□□□□□ -1.12
PPP4R1-202ENST00000400555 IGLV9-49A0A0B4J1Y8 123 aa8.05□□□□□ -1.12
PPP4R1-202ENST00000400555 BRK1Q8WUW1 75 aa8.05□□□□□ -1.12
PPP4R1-202ENST00000400555 IGFL1Q6UW32 110 aa8.04□□□□□ -1.12
PPP4R1-202ENST00000400555 F8WDY8 70 aa8.04□□□□□ -1.12
PPP4R1-202ENST00000400555 Q5XG85 94 aa8.03□□□□□ -1.12
PPP4R1-202ENST00000400555 NDUFC1O43677 76 aa8.03□□□□□ -1.12
PPP4R1-202ENST00000400555 TLX1NBP0CAT3 122 aa8.03□□□□□ -1.12
PPP4R1-202ENST00000400555 A0A0U1RQV1 116 aa8.03□□□□□ -1.12
PPP4R1-202ENST00000400555 OCR1Q9BZK8 76 aa8.03□□□□□ -1.12
PPP4R1-202ENST00000400555 SMIM26A0A096LP01 95 aa8.02□□□□□ -1.13
PPP4R1-202ENST00000400555 BCE1O60756 84 aa8.02□□□□□ -1.13
PPP4R1-202ENST00000400555 ANK2Q01484 3957 aa8.02□□□□□ -1.13
PPP4R1-202ENST00000400555 EPM2AB3EWF7 344 aa8.02□□□□□ -1.13
PPP4R1-202ENST00000400555 DSCR10P59022 87 aa8.02□□□□□ -1.13
PPP4R1-202ENST00000400555 LINC00208Q96KT6 92 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms