RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 LOC110117498A0A087WWA1 95 aa9.08□□□□□ -0.96
VAPA-202ENST00000400000 Q8N1X5 172 aa9.07□□□□□ -0.96
VAPA-202ENST00000400000 EIF4EBP3O60516 100 aaPredicted RBP9.07□□□□□ -0.96
VAPA-202ENST00000400000 CEP295Q9C0D2 2601 aa9.06□□□□□ -0.96
VAPA-202ENST00000400000 MTORP42345 2549 aa9.05□□□□□ -0.96
VAPA-202ENST00000400000 A0A087WTM6 91 aa9.04□□□□□ -0.96
VAPA-202ENST00000400000 PRO0461Q9UI25 63 aa9.04□□□□□ -0.96
VAPA-202ENST00000400000 FASNP49327 2511 aaKnown RBP9.03□□□□□ -0.96
VAPA-202ENST00000400000 PRO0628Q9UI54 55 aa9.03□□□□□ -0.96
VAPA-202ENST00000400000 CSNK1G2-AS1Q8NCQ2 148 aa9.03□□□□□ -0.96
VAPA-202ENST00000400000 ZNF575Q86XF7 245 aa9.02□□□□□ -0.96
VAPA-202ENST00000400000 LOC101927531A0A1B0GV80 90 aa9.02□□□□□ -0.97
VAPA-202ENST00000400000 LITAFQ99732 161 aa9.02□□□□□ -0.97
VAPA-202ENST00000400000 C8orf17Q9NRJ1 99 aa9.02□□□□□ -0.97
VAPA-202ENST00000400000 ZNF861PO60384 105 aa9.01□□□□□ -0.97
VAPA-202ENST00000400000 USP9YO00507 2555 aaPredicted RBP9.01□□□□□ -0.97
VAPA-202ENST00000400000 CEP350Q5VT06 3117 aa9□□□□□ -0.97
VAPA-202ENST00000400000 CRIPTQ9P021 101 aa9□□□□□ -0.97
VAPA-202ENST00000400000 LINC00528Q8N1L1 170 aa8.99□□□□□ -0.97
VAPA-202ENST00000400000 BPTFQ12830 3046 aa8.98□□□□□ -0.97
VAPA-202ENST00000400000 Q8N377 158 aa8.98□□□□□ -0.97
VAPA-202ENST00000400000 PSORS1C2Q9UIG4 136 aa8.98□□□□□ -0.97
VAPA-202ENST00000400000 M0R2T5 61 aa8.97□□□□□ -0.97
VAPA-202ENST00000400000 PRR15Q8IV56 129 aa8.97□□□□□ -0.97
VAPA-202ENST00000400000 IGLV5-48A0A075B6I7 105 aa8.97□□□□□ -0.97
VAPA-202ENST00000400000 MIR22HGQ0VDD5 57 aa8.97□□□□□ -0.97
VAPA-202ENST00000400000 ERC2-IT1O76042 136 aa8.97□□□□□ -0.97
VAPA-202ENST00000400000 A0A1B0GVX0 72 aa8.96□□□□□ -0.98
VAPA-202ENST00000400000 H3BPC8 53 aa8.95□□□□□ -0.98
VAPA-202ENST00000400000 KCNQ1DNQ9H478 68 aa8.95□□□□□ -0.98
VAPA-202ENST00000400000 RBM12B-AS1Q9P1G2 102 aa8.95□□□□□ -0.98
VAPA-202ENST00000400000 IGLV7-43P04211 117 aa8.94□□□□□ -0.98
VAPA-202ENST00000400000 UQCR11O14957 56 aa8.93□□□□□ -0.98
VAPA-202ENST00000400000 C19orf73Q9NVV2 129 aa8.93□□□□□ -0.98
VAPA-202ENST00000400000 GIG44P09565 113 aaPredicted RBP8.92□□□□□ -0.98
VAPA-202ENST00000400000 TNP2Q05952 138 aa8.9□□□□□ -0.99
VAPA-202ENST00000400000 A0A1B0GW54 56 aa8.88□□□□□ -0.99
VAPA-202ENST00000400000 USP24Q9UPU5 2620 aa8.85□□□□□ -0.99
VAPA-202ENST00000400000 C9orf163Q8N9P6 203 aa8.84□□□□□ -0.99
VAPA-202ENST00000400000 PRR26Q8N8Z3 221 aa8.83□□□□□ -1
VAPA-202ENST00000400000 PRR34Q9NV39 138 aa8.83□□□□□ -1
VAPA-202ENST00000400000 Q6ZSA8 131 aa8.82□□□□□ -1
VAPA-202ENST00000400000 SPRR4Q96PI1 79 aa8.82□□□□□ -1
VAPA-202ENST00000400000 LINC00612Q8N6U2 182 aa8.82□□□□□ -1
VAPA-202ENST00000400000 A0A096LNT2 108 aa8.81□□□□□ -1
VAPA-202ENST00000400000 PRRC2CQ9Y520 2896 aaKnown RBP8.8□□□□□ -1
VAPA-202ENST00000400000 LINC00336Q6ZUF6 198 aa8.8□□□□□ -1
VAPA-202ENST00000400000 CR1P17927 2039 aa8.79□□□□□ -1
VAPA-202ENST00000400000 KRTAP1-3Q8IUG1 177 aa8.78□□□□□ -1
VAPA-202ENST00000400000 PLA2G2DQ9UNK4 145 aa8.78□□□□□ -1
VAPA-202ENST00000400000 FAM104AQ969W3 186 aa8.78□□□□□ -1
VAPA-202ENST00000400000 MKI67P46013 3256 aaKnown RBP8.76□□□□□ -1.01
VAPA-202ENST00000400000 RPS28P62857 69 aaKnown RBP8.76□□□□□ -1.01
VAPA-202ENST00000400000 XIRP2A4UGR9 3374 aa8.76□□□□□ -1.01
VAPA-202ENST00000400000 IGLV7-46A0A075B6I9 117 aa8.76□□□□□ -1.01
VAPA-202ENST00000400000 A0A1W2PNM2 257 aa8.75□□□□□ -1.01
VAPA-202ENST00000400000 CDC42SE1Q9NRR8 79 aa8.75□□□□□ -1.01
VAPA-202ENST00000400000 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.75□□□□□ -1.01
VAPA-202ENST00000400000 CAMK2N1Q7Z7J9 78 aa8.74□□□□□ -1.01
VAPA-202ENST00000400000 HECTD1Q9ULT8 2610 aa8.73□□□□□ -1.01
VAPA-202ENST00000400000 KRTAP1-1Q07627 177 aa8.71□□□□□ -1.01
VAPA-202ENST00000400000 TLX1NBP0CAT3 122 aa8.7□□□□□ -1.02
VAPA-202ENST00000400000 CYP4F30PQ9H0H9 118 aa8.7□□□□□ -1.02
VAPA-202ENST00000400000 MGAM2Q2M2H8 2515 aa8.68□□□□□ -1.02
VAPA-202ENST00000400000 BRCA2P51587 3418 aa8.67□□□□□ -1.02
VAPA-202ENST00000400000 H7BZZ5 65 aa8.66□□□□□ -1.02
VAPA-202ENST00000400000 CNBPP62633 177 aaKnown RBP8.65□□□□□ -1.03
VAPA-202ENST00000400000 CFAP54Q96N23 3096 aa8.65□□□□□ -1.03
VAPA-202ENST00000400000 WIPF1O43516 503 aa8.64□□□□□ -1.03
VAPA-202ENST00000400000 CD164Q04900 197 aa8.64□□□□□ -1.03
VAPA-202ENST00000400000 KLK9Q2XQG4 91 aa8.62□□□□□ -1.03
VAPA-202ENST00000400000 FLNBO75369 2602 aaKnown RBP8.62□□□□□ -1.03
VAPA-202ENST00000400000 EPG5Q9HCE0 2579 aa8.61□□□□□ -1.03
VAPA-202ENST00000400000 KLKP1Q107X0 134 aa8.6□□□□□ -1.03
VAPA-202ENST00000400000 LUZP6Q538Z0 58 aa8.6□□□□□ -1.03
VAPA-202ENST00000400000 LAMA3Q16787 3333 aa8.59□□□□□ -1.03
VAPA-202ENST00000400000 HRES1P13985 223 aa8.56□□□□□ -1.04
VAPA-202ENST00000400000 S4R3F8 94 aa8.55□□□□□ -1.04
VAPA-202ENST00000400000 KTN1-AS1Q86SY8 53 aa8.55□□□□□ -1.04
VAPA-202ENST00000400000 A0A1B0GU33 70 aa8.53□□□□□ -1.04
VAPA-202ENST00000400000 CELSR3Q9NYQ7 3312 aa8.53□□□□□ -1.04
VAPA-202ENST00000400000 Q5VSD8 79 aa8.53□□□□□ -1.04
VAPA-202ENST00000400000 Q8N9P0 234 aaPredicted RBP8.52□□□□□ -1.04
VAPA-202ENST00000400000 PRUNE2Q8WUY3 3088 aa8.51□□□□□ -1.05
VAPA-202ENST00000400000 LCA10Q71F78 164 aa8.51□□□□□ -1.05
VAPA-202ENST00000400000 LINC00483Q53H64 154 aa8.5□□□□□ -1.05
VAPA-202ENST00000400000 LAMA2P24043 3122 aaKnown RBP8.5□□□□□ -1.05
VAPA-202ENST00000400000 Q1T7F1 81 aa8.49□□□□□ -1.05
VAPA-202ENST00000400000 FAM229BQ4G0N7 80 aa8.47□□□□□ -1.05
VAPA-202ENST00000400000 CHD7Q9P2D1 2997 aa8.47□□□□□ -1.05
VAPA-202ENST00000400000 ATRQ13535 2644 aa8.46□□□□□ -1.05
VAPA-202ENST00000400000 PRAC1Q96KF2 57 aa8.45□□□□□ -1.06
VAPA-202ENST00000400000 Q8NDZ9 215 aa8.44□□□□□ -1.06
VAPA-202ENST00000400000 ITPR3Q14573 2671 aa8.44□□□□□ -1.06
VAPA-202ENST00000400000 SPANXA2-OT1Q8N9U9 137 aa8.44□□□□□ -1.06
VAPA-202ENST00000400000 FLNAP21333 2647 aaKnown RBP8.43□□□□□ -1.06
VAPA-202ENST00000400000 A0A0C4DFX4 3053 aa8.43□□□□□ -1.06
VAPA-202ENST00000400000 ZCCHC13Q8WW36 166 aaKnown RBP8.43□□□□□ -1.06
VAPA-202ENST00000400000 TRIOO75962 3097 aa8.42□□□□□ -1.06
VAPA-202ENST00000400000 OCR1Q9BZK8 76 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms