RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 LITAFQ99732 161 aa8.58□□□□□ -1.04
SMIM11A-203ENST00000399299 TRAV23DV6A0A075B6W5 121 aa8.57□□□□□ -1.04
SMIM11A-203ENST00000399299 NPC2P61916 151 aa8.57□□□□□ -1.04
SMIM11A-203ENST00000399299 Q9BRP9 147 aa8.57□□□□□ -1.04
SMIM11A-203ENST00000399299 LINC00308Q8TCZ7 52 aa8.56□□□□□ -1.04
SMIM11A-203ENST00000399299 RETNLBQ9BQ08 111 aa8.56□□□□□ -1.04
SMIM11A-203ENST00000399299 SPANXCQ9NY87 97 aa8.56□□□□□ -1.04
SMIM11A-203ENST00000399299 CBY1Q9Y3M2 126 aa8.56□□□□□ -1.04
SMIM11A-203ENST00000399299 ZNF815PA8K554 130 aa8.55□□□□□ -1.04
SMIM11A-203ENST00000399299 ERC2-IT1O76042 136 aa8.55□□□□□ -1.04
SMIM11A-203ENST00000399299 JOSD1Q15040 202 aaPredicted RBP8.55□□□□□ -1.04
SMIM11A-203ENST00000399299 PPDPFQ9H3Y8 114 aa8.55□□□□□ -1.04
SMIM11A-203ENST00000399299 ZNF73O43830 326 aaPredicted RBP8.54□□□□□ -1.04
SMIM11A-203ENST00000399299 KRTDAPP60985 99 aa8.54□□□□□ -1.04
SMIM11A-203ENST00000399299 GAGE2AQ6NT46 116 aa8.54□□□□□ -1.04
SMIM11A-203ENST00000399299 TPRXLQ17RH7 258 aa8.53□□□□□ -1.04
SMIM11A-203ENST00000399299 Q8NBF4 154 aa8.53□□□□□ -1.04
SMIM11A-203ENST00000399299 C20orf202A1L168 122 aa8.52□□□□□ -1.05
SMIM11A-203ENST00000399299 TTTY13Q9BZ97 58 aa8.52□□□□□ -1.05
SMIM11A-203ENST00000399299 IGLV7-46A0A075B6I9 117 aa8.5□□□□□ -1.05
SMIM11A-203ENST00000399299 C5orf52A6NGY3 159 aa8.5□□□□□ -1.05
SMIM11A-203ENST00000399299 SPINK1P00995 79 aa8.5□□□□□ -1.05
SMIM11A-203ENST00000399299 HINT1P49773 126 aaPredicted RBP8.5□□□□□ -1.05
SMIM11A-203ENST00000399299 AKR1D1P51857 326 aa8.5□□□□□ -1.05
SMIM11A-203ENST00000399299 SPANXDQ9BXN6 97 aa8.5□□□□□ -1.05
SMIM11A-203ENST00000399299 SSBP3-AS1Q7Z2R9 100 aa8.49□□□□□ -1.05
SMIM11A-203ENST00000399299 LINC00518Q8N0U6 118 aa8.49□□□□□ -1.05
SMIM11A-203ENST00000399299 MOBPQ13875 183 aa8.48□□□□□ -1.05
SMIM11A-203ENST00000399299 ANKRD39Q53RE8 183 aa8.48□□□□□ -1.05
SMIM11A-203ENST00000399299 FP248Q71RG6 208 aaPredicted RBP8.48□□□□□ -1.05
SMIM11A-203ENST00000399299 OR13C6PQ8NH95 151 aa8.48□□□□□ -1.05
SMIM11A-203ENST00000399299 IGLV9-49A0A0B4J1Y8 123 aa8.47□□□□□ -1.05
SMIM11A-203ENST00000399299 RPS29P62273 56 aaKnown RBP8.47□□□□□ -1.05
SMIM11A-203ENST00000399299 SCGB1D4Q6XE38 83 aa8.47□□□□□ -1.05
SMIM11A-203ENST00000399299 COPS9Q8WXC6 57 aa8.47□□□□□ -1.05
SMIM11A-203ENST00000399299 IFITM1P13164 125 aa8.45□□□□□ -1.06
SMIM11A-203ENST00000399299 Q6ZVH6 145 aa8.45□□□□□ -1.06
SMIM11A-203ENST00000399299 ATOH7Q8N100 152 aa8.45□□□□□ -1.06
SMIM11A-203ENST00000399299 CDIP1Q9H305 208 aa8.45□□□□□ -1.06
SMIM11A-203ENST00000399299 DHRS4-AS1Q9P1J3 65 aa8.45□□□□□ -1.06
SMIM11A-203ENST00000399299 SNRPEP62304 92 aaKnown RBP8.44□□□□□ -1.06
SMIM11A-203ENST00000399299 S100A1P23297 94 aa8.43□□□□□ -1.06
SMIM11A-203ENST00000399299 ELOF1P60002 83 aaKnown RBP8.43□□□□□ -1.06
SMIM11A-203ENST00000399299 ST20-AS1Q8NBB2 130 aa8.43□□□□□ -1.06
SMIM11A-203ENST00000399299 MUC2Q02817 5179 aa8.43□□□□□ -1.06
SMIM11A-203ENST00000399299 SPRR1BP22528 89 aa8.42□□□□□ -1.06
SMIM11A-203ENST00000399299 PCP2Q8IVA1 136 aa8.42□□□□□ -1.06
SMIM11A-203ENST00000399299 HIST3H2BBQ8N257 126 aa8.42□□□□□ -1.06
SMIM11A-203ENST00000399299 TRBV7-6A0A0J9YX20 115 aa8.41□□□□□ -1.06
SMIM11A-203ENST00000399299 COX7BP24311 80 aa8.41□□□□□ -1.06
SMIM11A-203ENST00000399299 C6orf99Q4VX62 202 aa8.41□□□□□ -1.06
SMIM11A-203ENST00000399299 C9orf153Q5TBE3 101 aa8.41□□□□□ -1.06
SMIM11A-203ENST00000399299 SLC25A34Q6PIV7 304 aa8.4□□□□□ -1.06
SMIM11A-203ENST00000399299 Q8N377 158 aa8.4□□□□□ -1.06
SMIM11A-203ENST00000399299 HIST1H2BLQ99880 126 aa8.4□□□□□ -1.06
SMIM11A-203ENST00000399299 A0A0U1RQV1 116 aa8.39□□□□□ -1.07
SMIM11A-203ENST00000399299 S100A2P29034 98 aa8.39□□□□□ -1.07
SMIM11A-203ENST00000399299 KRTAP13-3Q3SY46 172 aa8.38□□□□□ -1.07
SMIM11A-203ENST00000399299 MUSTN1Q8IVN3 82 aa8.38□□□□□ -1.07
SMIM11A-203ENST00000399299 SLC25A20O43772 301 aa8.37□□□□□ -1.07
SMIM11A-203ENST00000399299 MUC17Q685J3 4493 aa8.36□□□□□ -1.07
SMIM11A-203ENST00000399299 A0A1B0GWB2 263 aa8.36□□□□□ -1.07
SMIM11A-203ENST00000399299 TRAV13-2A0A0B4J235 113 aa8.35□□□□□ -1.07
SMIM11A-203ENST00000399299 A6NDN8 102 aa8.35□□□□□ -1.07
SMIM11A-203ENST00000399299 LAMTOR3Q9UHA4 124 aa8.35□□□□□ -1.07
SMIM11A-203ENST00000399299 HSBP1L1C9JCN9 74 aa8.34□□□□□ -1.07
SMIM11A-203ENST00000399299 S100A6P06703 90 aa8.34□□□□□ -1.07
SMIM11A-203ENST00000399299 SMCPP49901 116 aaPredicted RBP8.34□□□□□ -1.07
SMIM11A-203ENST00000399299 A4D1N5 150 aa8.33□□□□□ -1.08
SMIM11A-203ENST00000399299 TEX49A0A1B0GTD5 131 aa8.32□□□□□ -1.08
SMIM11A-203ENST00000399299 TAL2Q16559 108 aa8.32□□□□□ -1.08
SMIM11A-203ENST00000399299 LIMD2Q9BT23 127 aa8.31□□□□□ -1.08
SMIM11A-203ENST00000399299 IGLV5-48A0A075B6I7 105 aa8.3□□□□□ -1.08
SMIM11A-203ENST00000399299 SMIM11BQ8TCY0 68 aa8.3□□□□□ -1.08
SMIM11A-203ENST00000399299 LINC01547P58512 204 aaPredicted RBP8.29□□□□□ -1.08
SMIM11A-203ENST00000399299 DEFB105AQ8NG35 78 aa8.29□□□□□ -1.08
SMIM11A-203ENST00000399299 NHP2Q9NX24 153 aaKnown RBP8.29□□□□□ -1.08
SMIM11A-203ENST00000399299 CD164Q04900 197 aa8.28□□□□□ -1.08
SMIM11A-203ENST00000399299 Q1RN00 199 aa8.28□□□□□ -1.08
SMIM11A-203ENST00000399299 ASB16-AS1Q495Z4 193 aa8.27□□□□□ -1.09
SMIM11A-203ENST00000399299 SMIM29Q86T20 159 aa8.27□□□□□ -1.09
SMIM11A-203ENST00000399299 PRO1933Q9H354 126 aa8.27□□□□□ -1.09
SMIM11A-203ENST00000399299 SCGB1D1O95968 90 aa8.25□□□□□ -1.09
SMIM11A-203ENST00000399299 VAMP3Q15836 100 aa8.24□□□□□ -1.09
SMIM11A-203ENST00000399299 HRCT1Q6UXD1 115 aa8.24□□□□□ -1.09
SMIM11A-203ENST00000399299 SEC61BP60468 96 aaKnown RBP8.23□□□□□ -1.09
SMIM11A-203ENST00000399299 XP32Q5T750 250 aa8.23□□□□□ -1.09
SMIM11A-203ENST00000399299 Q5XG85 94 aa8.23□□□□□ -1.09
SMIM11A-203ENST00000399299 H7C2G1 150 aa8.22□□□□□ -1.09
SMIM11A-203ENST00000399299 COX8AP10176 69 aa8.22□□□□□ -1.09
SMIM11A-203ENST00000399299 DLEU1O43261 78 aa8.21□□□□□ -1.1
SMIM11A-203ENST00000399299 LCE2AQ5TA79 106 aaPredicted RBP8.21□□□□□ -1.1
SMIM11A-203ENST00000399299 LINC00575Q6W349 94 aa8.21□□□□□ -1.1
SMIM11A-203ENST00000399299 HIST1H4GQ99525 98 aa8.2□□□□□ -1.1
SMIM11A-203ENST00000399299 hADV29S1A0JD25 119 aa8.18□□□□□ -1.1
SMIM11A-203ENST00000399299 FAT4Q6V0I7 4981 aa8.18□□□□□ -1.1
SMIM11A-203ENST00000399299 Q6ZQY7 126 aa8.17□□□□□ -1.1
SMIM11A-203ENST00000399299 F8WEM9 126 aa8.16□□□□□ -1.1
SMIM11A-203ENST00000399299 BVES-AS1Q5T3Y7 98 aa8.16□□□□□ -1.1
SMIM11A-203ENST00000399299 C12orf57Q99622 126 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms