RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 MUSTN1Q8IVN3 82 aa12.66□□□□□ -0.38
TSPAN4-206ENST00000397408 OR13C6PQ8NH95 151 aa12.66□□□□□ -0.38
TSPAN4-206ENST00000397408 PPDPFQ9H3Y8 114 aa12.66□□□□□ -0.38
TSPAN4-206ENST00000397408 PAM16Q9Y3D7 125 aa12.66□□□□□ -0.38
TSPAN4-206ENST00000397408 COX8AP10176 69 aa12.65□□□□□ -0.38
TSPAN4-206ENST00000397408 LINC00518Q8N0U6 118 aa12.64□□□□□ -0.39
TSPAN4-206ENST00000397408 VAMP8Q9BV40 100 aa12.64□□□□□ -0.39
TSPAN4-206ENST00000397408 SPATA45Q537H7 98 aa12.63□□□□□ -0.39
TSPAN4-206ENST00000397408 B5MCH6 92 aa12.62□□□□□ -0.39
TSPAN4-206ENST00000397408 ZNF73O43830 326 aaPredicted RBP12.62□□□□□ -0.39
TSPAN4-206ENST00000397408 ANAPC11Q9NYG5 84 aa12.62□□□□□ -0.39
TSPAN4-206ENST00000397408 CBY1Q9Y3M2 126 aa12.62□□□□□ -0.39
TSPAN4-206ENST00000397408 RPL13AP40429 203 aaKnown RBP12.61□□□□□ -0.39
TSPAN4-206ENST00000397408 C14orf144Q96I85 54 aa12.6□□□□□ -0.39
TSPAN4-206ENST00000397408 A0A087X002 238 aa12.59□□□□□ -0.39
TSPAN4-206ENST00000397408 DLEU1O43261 78 aa12.59□□□□□ -0.39
TSPAN4-206ENST00000397408 PYY3Q5JQD4 70 aa12.59□□□□□ -0.39
TSPAN4-206ENST00000397408 Q6ZRX8 168 aa12.59□□□□□ -0.39
TSPAN4-206ENST00000397408 SMCR5Q8TEV8 140 aa12.59□□□□□ -0.39
TSPAN4-206ENST00000397408 CRYGAP11844 174 aa12.57□□□□□ -0.4
TSPAN4-206ENST00000397408 FAM229BQ4G0N7 80 aa12.55□□□□□ -0.4
TSPAN4-206ENST00000397408 SPRR4Q96PI1 79 aa12.55□□□□□ -0.4
TSPAN4-206ENST00000397408 Q9BRP9 147 aa12.55□□□□□ -0.4
TSPAN4-206ENST00000397408 A6NDN8 102 aa12.54□□□□□ -0.4
TSPAN4-206ENST00000397408 HINT1P49773 126 aaPredicted RBP12.54□□□□□ -0.4
TSPAN4-206ENST00000397408 ZNF706Q9Y5V0 76 aaPredicted RBP12.54□□□□□ -0.4
TSPAN4-206ENST00000397408 SLC25A34Q6PIV7 304 aa12.54□□□□□ -0.4
TSPAN4-206ENST00000397408 HIST1H4GQ99525 98 aa12.54□□□□□ -0.4
TSPAN4-206ENST00000397408 ERC2-IT1O76042 136 aa12.53□□□□□ -0.4
TSPAN4-206ENST00000397408 TRAV13-2A0A0B4J235 113 aa12.52□□□□□ -0.41
TSPAN4-206ENST00000397408 A4D1N5 150 aa12.52□□□□□ -0.41
TSPAN4-206ENST00000397408 C6orf99Q4VX62 202 aa12.51□□□□□ -0.41
TSPAN4-206ENST00000397408 KRTAP13-2Q52LG2 175 aa12.51□□□□□ -0.41
TSPAN4-206ENST00000397408 TYMSOSQ8TAI1 123 aa12.51□□□□□ -0.41
TSPAN4-206ENST00000397408 HIGD1BQ9P298 99 aa12.49□□□□□ -0.41
TSPAN4-206ENST00000397408 C2orf91Q6ZV80 131 aa12.48□□□□□ -0.41
TSPAN4-206ENST00000397408 COX7BP24311 80 aa12.47□□□□□ -0.41
TSPAN4-206ENST00000397408 HMCN2Q8NDA2 5059 aa12.47□□□□□ -0.41
TSPAN4-206ENST00000397408 ELOF1P60002 83 aaKnown RBP12.46□□□□□ -0.41
TSPAN4-206ENST00000397408 C12orf57Q99622 126 aa12.46□□□□□ -0.41
TSPAN4-206ENST00000397408 GAGE2AQ6NT46 116 aa12.45□□□□□ -0.42
TSPAN4-206ENST00000397408 LINC00483Q53H64 154 aa12.44□□□□□ -0.42
TSPAN4-206ENST00000397408 C3orf22Q8N5N4 141 aa12.44□□□□□ -0.42
TSPAN4-206ENST00000397408 SMIM11BQ8TCY0 68 aa12.44□□□□□ -0.42
TSPAN4-206ENST00000397408 DHRS4-AS1Q9P1J3 65 aa12.44□□□□□ -0.42
TSPAN4-206ENST00000397408 TRBV7-6A0A0J9YX20 115 aa12.42□□□□□ -0.42
TSPAN4-206ENST00000397408 ST20-AS1Q8NBB2 130 aa12.41□□□□□ -0.42
TSPAN4-206ENST00000397408 A0A1B0GWB2 263 aa12.4□□□□□ -0.42
TSPAN4-206ENST00000397408 TAL2Q16559 108 aa12.38□□□□□ -0.43
TSPAN4-206ENST00000397408 LINC00304Q8N9R0 145 aa12.37□□□□□ -0.43
TSPAN4-206ENST00000397408 TSPAN13O95857 204 aa12.36□□□□□ -0.43
TSPAN4-206ENST00000397408 CEND1Q8N111 149 aa12.36□□□□□ -0.43
TSPAN4-206ENST00000397408 CFC1BP0CG36 223 aa12.35□□□□□ -0.43
TSPAN4-206ENST00000397408 CFC1P0CG37 223 aa12.35□□□□□ -0.43
TSPAN4-206ENST00000397408 IGLV9-49A0A0B4J1Y8 123 aa12.34□□□□□ -0.43
TSPAN4-206ENST00000397408 RAB37Q96AX2 223 aa12.34□□□□□ -0.43
TSPAN4-206ENST00000397408 UQCR10Q9UDW1 63 aa12.34□□□□□ -0.43
TSPAN4-206ENST00000397408 A0A0B4J2C4 111 aa12.32□□□□□ -0.44
TSPAN4-206ENST00000397408 MOBPQ13875 183 aa12.32□□□□□ -0.44
TSPAN4-206ENST00000397408 VAMP3Q15836 100 aa12.32□□□□□ -0.44
TSPAN4-206ENST00000397408 TMEM238LA0A1B0GVL6 79 aa12.31□□□□□ -0.44
TSPAN4-206ENST00000397408 A6NJY4 79 aa12.31□□□□□ -0.44
TSPAN4-206ENST00000397408 HSD52Q0P140 79 aa12.31□□□□□ -0.44
TSPAN4-206ENST00000397408 H7C2G1 150 aa12.3□□□□□ -0.44
TSPAN4-206ENST00000397408 FXYD2P54710 66 aa12.3□□□□□ -0.44
TSPAN4-206ENST00000397408 Q8NBF4 154 aa12.3□□□□□ -0.44
TSPAN4-206ENST00000397408 SPRR1BP22528 89 aa12.29□□□□□ -0.44
TSPAN4-206ENST00000397408 NHP2Q9NX24 153 aaKnown RBP12.29□□□□□ -0.44
TSPAN4-206ENST00000397408 C9orf153Q5TBE3 101 aa12.28□□□□□ -0.44
TSPAN4-206ENST00000397408 DEFB105AQ8NG35 78 aa12.28□□□□□ -0.44
TSPAN4-206ENST00000397408 SLC25A20O43772 301 aa12.27□□□□□ -0.45
TSPAN4-206ENST00000397408 SMIM6P0DI80 62 aa12.27□□□□□ -0.45
TSPAN4-206ENST00000397408 LINC00575Q6W349 94 aa12.26□□□□□ -0.45
TSPAN4-206ENST00000397408 BVES-AS1Q5T3Y7 98 aa12.25□□□□□ -0.45
TSPAN4-206ENST00000397408 TEX49A0A1B0GTD5 131 aa12.24□□□□□ -0.45
TSPAN4-206ENST00000397408 C4orf48Q5BLP8 95 aa12.24□□□□□ -0.45
TSPAN4-206ENST00000397408 SPAG11AQ6PDA7 123 aa12.24□□□□□ -0.45
TSPAN4-206ENST00000397408 SSBP3-AS1Q7Z2R9 100 aa12.24□□□□□ -0.45
TSPAN4-206ENST00000397408 Q1RN00 199 aa12.23□□□□□ -0.45
TSPAN4-206ENST00000397408 PRO1933Q9H354 126 aa12.23□□□□□ -0.45
TSPAN4-206ENST00000397408 PRO1854Q9UHT4 67 aa12.23□□□□□ -0.45
TSPAN4-206ENST00000397408 IGLV5-48A0A075B6I7 105 aa12.22□□□□□ -0.45
TSPAN4-206ENST00000397408 LINC01547P58512 204 aaPredicted RBP12.22□□□□□ -0.45
TSPAN4-206ENST00000397408 LAMTOR3Q9UHA4 124 aa12.22□□□□□ -0.45
TSPAN4-206ENST00000397408 hADV29S1A0JD25 119 aa12.21□□□□□ -0.45
TSPAN4-206ENST00000397408 PRR4Q16378 134 aa12.21□□□□□ -0.45
TSPAN4-206ENST00000397408 CTAG1AP78358 180 aa12.2□□□□□ -0.46
TSPAN4-206ENST00000397408 LOC105371267A0A1B0GV96 52 aa12.19□□□□□ -0.46
TSPAN4-206ENST00000397408 Q6ZQY7 126 aa12.19□□□□□ -0.46
TSPAN4-206ENST00000397408 K7ERJ3 54 aa12.18□□□□□ -0.46
TSPAN4-206ENST00000397408 LRP2P98164 4655 aa12.17□□□□□ -0.46
TSPAN4-206ENST00000397408 RETNLBQ9BQ08 111 aa12.17□□□□□ -0.46
TSPAN4-206ENST00000397408 SMIM29Q86T20 159 aa12.16□□□□□ -0.46
TSPAN4-206ENST00000397408 Q8N377 158 aa12.16□□□□□ -0.46
TSPAN4-206ENST00000397408 SPINK1P00995 79 aa12.15□□□□□ -0.46
TSPAN4-206ENST00000397408 H0YGX0 51 aa12.13□□□□□ -0.47
TSPAN4-206ENST00000397408 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.12□□□□□ -0.47
TSPAN4-206ENST00000397408 TRIAP1O43715 76 aa12.11□□□□□ -0.47
TSPAN4-206ENST00000397408 FAM218AQ96MZ4 157 aa12.11□□□□□ -0.47
TSPAN4-206ENST00000397408 RPS29P62273 56 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms