RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 HIST1H2BMQ99879 126 aa10.41□□□□□ -0.74
FXN-203ENST00000396366 SYS1-DBNDD2H3BUS1 97 aa10.4□□□□□ -0.74
FXN-203ENST00000396366 Q6ZRX8 168 aa10.4□□□□□ -0.74
FXN-203ENST00000396366 IGLV9-49A0A0B4J1Y8 123 aa10.39□□□□□ -0.75
FXN-203ENST00000396366 FAT4Q6V0I7 4981 aa10.38□□□□□ -0.75
FXN-203ENST00000396366 TRAV23DV6A0A075B6W5 121 aa10.37□□□□□ -0.75
FXN-203ENST00000396366 MOBPQ13875 183 aa10.37□□□□□ -0.75
FXN-203ENST00000396366 LITAFQ99732 161 aa10.36□□□□□ -0.75
FXN-203ENST00000396366 ZNF73O43830 326 aaPredicted RBP10.34□□□□□ -0.75
FXN-203ENST00000396366 SPINK1P00995 79 aa10.34□□□□□ -0.75
FXN-203ENST00000396366 LINC01545Q5VT33 79 aa10.34□□□□□ -0.75
FXN-203ENST00000396366 ST20-AS1Q8NBB2 130 aa10.34□□□□□ -0.75
FXN-203ENST00000396366 TTTY13Q9BZ97 58 aa10.34□□□□□ -0.75
FXN-203ENST00000396366 FP248Q71RG6 208 aaPredicted RBP10.33□□□□□ -0.76
FXN-203ENST00000396366 LINC00308Q8TCZ7 52 aa10.33□□□□□ -0.76
FXN-203ENST00000396366 A0A0U1RQV1 116 aa10.32□□□□□ -0.76
FXN-203ENST00000396366 PET117Q6UWS5 81 aa10.32□□□□□ -0.76
FXN-203ENST00000396366 SSBP3-AS1Q7Z2R9 100 aa10.31□□□□□ -0.76
FXN-203ENST00000396366 C3orf79P0CE67 100 aa10.3□□□□□ -0.76
FXN-203ENST00000396366 JOSD1Q15040 202 aaPredicted RBP10.3□□□□□ -0.76
FXN-203ENST00000396366 KRTAP13-3Q3SY46 172 aa10.3□□□□□ -0.76
FXN-203ENST00000396366 ZNF815PA8K554 130 aa10.29□□□□□ -0.76
FXN-203ENST00000396366 OR13C6PQ8NH95 151 aa10.29□□□□□ -0.76
FXN-203ENST00000396366 SPANXCQ9NY87 97 aa10.29□□□□□ -0.76
FXN-203ENST00000396366 TIMM17BO60830 172 aa10.28□□□□□ -0.76
FXN-203ENST00000396366 Q8N377 158 aa10.28□□□□□ -0.76
FXN-203ENST00000396366 KRTDAPP60985 99 aa10.26□□□□□ -0.77
FXN-203ENST00000396366 LCE2AQ5TA79 106 aaPredicted RBP10.26□□□□□ -0.77
FXN-203ENST00000396366 C9orf153Q5TBE3 101 aa10.26□□□□□ -0.77
FXN-203ENST00000396366 HINT1P49773 126 aaPredicted RBP10.24□□□□□ -0.77
FXN-203ENST00000396366 RPS29P62273 56 aaKnown RBP10.23□□□□□ -0.77
FXN-203ENST00000396366 COA6Q5JTJ3 125 aaKnown RBP10.23□□□□□ -0.77
FXN-203ENST00000396366 SPANXDQ9BXN6 97 aa10.22□□□□□ -0.77
FXN-203ENST00000396366 SLC25A20O43772 301 aa10.21□□□□□ -0.77
FXN-203ENST00000396366 ANKRD39Q53RE8 183 aa10.21□□□□□ -0.77
FXN-203ENST00000396366 CBY1Q9Y3M2 126 aa10.21□□□□□ -0.77
FXN-203ENST00000396366 ATOH7Q8N100 152 aa10.2□□□□□ -0.78
FXN-203ENST00000396366 C5orf52A6NGY3 159 aa10.19□□□□□ -0.78
FXN-203ENST00000396366 SPRR1BP22528 89 aa10.19□□□□□ -0.78
FXN-203ENST00000396366 DHRS4-AS1Q9P1J3 65 aa10.19□□□□□ -0.78
FXN-203ENST00000396366 COX7BP24311 80 aa10.18□□□□□ -0.78
FXN-203ENST00000396366 ASB16-AS1Q495Z4 193 aa10.18□□□□□ -0.78
FXN-203ENST00000396366 C6orf99Q4VX62 202 aa10.18□□□□□ -0.78
FXN-203ENST00000396366 SCGB1D4Q6XE38 83 aa10.18□□□□□ -0.78
FXN-203ENST00000396366 LINC00518Q8N0U6 118 aa10.18□□□□□ -0.78
FXN-203ENST00000396366 KRTAP4-1Q9BYQ7 146 aa10.18□□□□□ -0.78
FXN-203ENST00000396366 ELOF1P60002 83 aaKnown RBP10.17□□□□□ -0.78
FXN-203ENST00000396366 HRCT1Q6UXD1 115 aa10.17□□□□□ -0.78
FXN-203ENST00000396366 PCP2Q8IVA1 136 aa10.15□□□□□ -0.78
FXN-203ENST00000396366 DEFB105AQ8NG35 78 aa10.15□□□□□ -0.78
FXN-203ENST00000396366 C20orf202A1L168 122 aa10.14□□□□□ -0.79
FXN-203ENST00000396366 MUSTN1Q8IVN3 82 aa10.13□□□□□ -0.79
FXN-203ENST00000396366 LAMTOR3Q9UHA4 124 aa10.12□□□□□ -0.79
FXN-203ENST00000396366 A6NDN8 102 aa10.11□□□□□ -0.79
FXN-203ENST00000396366 TAL2Q16559 108 aa10.11□□□□□ -0.79
FXN-203ENST00000396366 Q1RN00 199 aa10.11□□□□□ -0.79
FXN-203ENST00000396366 SLC25A34Q6PIV7 304 aa10.11□□□□□ -0.79
FXN-203ENST00000396366 IFITM1P13164 125 aa10.1□□□□□ -0.79
FXN-203ENST00000396366 SEC61BP60468 96 aaKnown RBP10.1□□□□□ -0.79
FXN-203ENST00000396366 KRTAP9-2Q9BYQ4 174 aa10.1□□□□□ -0.79
FXN-203ENST00000396366 XP32Q5T750 250 aa10.09□□□□□ -0.79
FXN-203ENST00000396366 TRBV7-6A0A0J9YX20 115 aa10.08□□□□□ -0.8
FXN-203ENST00000396366 TEX49A0A1B0GTD5 131 aa10.07□□□□□ -0.8
FXN-203ENST00000396366 SMIM29Q86T20 159 aa10.07□□□□□ -0.8
FXN-203ENST00000396366 A0A0G2JQZ4 141 aa10.06□□□□□ -0.8
FXN-203ENST00000396366 LINC01547P58512 204 aaPredicted RBP10.06□□□□□ -0.8
FXN-203ENST00000396366 Q6ZVH6 145 aa10.06□□□□□ -0.8
FXN-203ENST00000396366 COPS9Q8WXC6 57 aa10.06□□□□□ -0.8
FXN-203ENST00000396366 A0A1B0GWB2 263 aa10.05□□□□□ -0.8
FXN-203ENST00000396366 LIMD2Q9BT23 127 aa10.05□□□□□ -0.8
FXN-203ENST00000396366 H7C2G1 150 aa10.04□□□□□ -0.8
FXN-203ENST00000396366 SMIM11BQ8TCY0 68 aa10.03□□□□□ -0.8
FXN-203ENST00000396366 PRO1933Q9H354 126 aa10.03□□□□□ -0.8
FXN-203ENST00000396366 C9orf92A6NGG3 77 aa10.02□□□□□ -0.81
FXN-203ENST00000396366 HIST3H2BBQ8N257 126 aa10.02□□□□□ -0.81
FXN-203ENST00000396366 HIST1H2BLQ99880 126 aa10.02□□□□□ -0.81
FXN-203ENST00000396366 IGLV5-48A0A075B6I7 105 aa10.01□□□□□ -0.81
FXN-203ENST00000396366 AKR1D1P51857 326 aa10□□□□□ -0.81
FXN-203ENST00000396366 CD164Q04900 197 aa10□□□□□ -0.81
FXN-203ENST00000396366 TRAV13-2A0A0B4J235 113 aa9.99□□□□□ -0.81
FXN-203ENST00000396366 SNRPEP62304 92 aaKnown RBP9.99□□□□□ -0.81
FXN-203ENST00000396366 A4D1N5 150 aa9.97□□□□□ -0.81
FXN-203ENST00000396366 S100A2P29034 98 aa9.97□□□□□ -0.81
FXN-203ENST00000396366 LCE2DQ5TA82 110 aaPredicted RBP9.97□□□□□ -0.81
FXN-203ENST00000396366 PCOTHQ58A44 107 aa9.94□□□□□ -0.82
FXN-203ENST00000396366 C1orf195Q5TG92 126 aa9.94□□□□□ -0.82
FXN-203ENST00000396366 HSBP1L1C9JCN9 74 aa9.92□□□□□ -0.82
FXN-203ENST00000396366 Q5XG85 94 aa9.92□□□□□ -0.82
FXN-203ENST00000396366 NHP2Q9NX24 153 aaKnown RBP9.92□□□□□ -0.82
FXN-203ENST00000396366 LCE2CQ5TA81 110 aa9.91□□□□□ -0.82
FXN-203ENST00000396366 LINC00575Q6W349 94 aa9.91□□□□□ -0.82
FXN-203ENST00000396366 IGLV8-61A0A075B6I0 122 aa9.89□□□□□ -0.83
FXN-203ENST00000396366 VAMP3Q15836 100 aa9.89□□□□□ -0.83
FXN-203ENST00000396366 S100A6P06703 90 aa9.88□□□□□ -0.83
FXN-203ENST00000396366 KRTAP19-2Q3LHN2 52 aa9.88□□□□□ -0.83
FXN-203ENST00000396366 C12orf57Q99622 126 aa9.88□□□□□ -0.83
FXN-203ENST00000396366 Q6ZQY7 126 aa9.87□□□□□ -0.83
FXN-203ENST00000396366 hADV29S1A0JD25 119 aa9.86□□□□□ -0.83
FXN-203ENST00000396366 SCGB1D1O95968 90 aa9.86□□□□□ -0.83
FXN-203ENST00000396366 S100A1P23297 94 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms