RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 Q8N377 158 aa10.11□□□□□ -0.79
CXCL12-204ENST00000395793 KRTAP9-2Q9BYQ4 174 aa10.11□□□□□ -0.79
CXCL12-204ENST00000395793 SSBP3-AS1Q7Z2R9 100 aa10.1□□□□□ -0.79
CXCL12-204ENST00000395793 LITAFQ99732 161 aa10.1□□□□□ -0.79
CXCL12-204ENST00000395793 ZNF73O43830 326 aaPredicted RBP10.09□□□□□ -0.79
CXCL12-204ENST00000395793 RPS29P62273 56 aaKnown RBP10.09□□□□□ -0.79
CXCL12-204ENST00000395793 ST20-AS1Q8NBB2 130 aa10.09□□□□□ -0.79
CXCL12-204ENST00000395793 SYS1-DBNDD2H3BUS1 97 aa10.08□□□□□ -0.8
CXCL12-204ENST00000395793 KRTAP4-1Q9BYQ7 146 aa10.08□□□□□ -0.8
CXCL12-204ENST00000395793 HIST1H2BKO60814 126 aa10.07□□□□□ -0.8
CXCL12-204ENST00000395793 HIST1H2BJP06899 126 aa10.07□□□□□ -0.8
CXCL12-204ENST00000395793 HIST1H2BOP23527 126 aa10.07□□□□□ -0.8
CXCL12-204ENST00000395793 HIST1H2BBP33778 126 aa10.07□□□□□ -0.8
CXCL12-204ENST00000395793 HIST1H2BDP58876 126 aa10.07□□□□□ -0.8
CXCL12-204ENST00000395793 HIST1H2BCP62807 126 aa10.07□□□□□ -0.8
CXCL12-204ENST00000395793 HIST2H2BEQ16778 126 aa10.07□□□□□ -0.8
CXCL12-204ENST00000395793 ASB16-AS1Q495Z4 193 aa10.07□□□□□ -0.8
CXCL12-204ENST00000395793 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.07□□□□□ -0.8
CXCL12-204ENST00000395793 HIST1H2BHQ93079 126 aa10.07□□□□□ -0.8
CXCL12-204ENST00000395793 HIST1H2BNQ99877 126 aa10.07□□□□□ -0.8
CXCL12-204ENST00000395793 HIST1H2BMQ99879 126 aa10.07□□□□□ -0.8
CXCL12-204ENST00000395793 JOSD1Q15040 202 aaPredicted RBP10.05□□□□□ -0.8
CXCL12-204ENST00000395793 LINC00308Q8TCZ7 52 aa10.05□□□□□ -0.8
CXCL12-204ENST00000395793 C9orf153Q5TBE3 101 aa10.04□□□□□ -0.8
CXCL12-204ENST00000395793 LINC01545Q5VT33 79 aa10.04□□□□□ -0.8
CXCL12-204ENST00000395793 TTTY13Q9BZ97 58 aa10.03□□□□□ -0.8
CXCL12-204ENST00000395793 SPANXCQ9NY87 97 aa10.02□□□□□ -0.81
CXCL12-204ENST00000395793 SLC25A20O43772 301 aa10.01□□□□□ -0.81
CXCL12-204ENST00000395793 TIMM17BO60830 172 aa10.01□□□□□ -0.81
CXCL12-204ENST00000395793 ZNF815PA8K554 130 aa9.99□□□□□ -0.81
CXCL12-204ENST00000395793 SPRR1BP22528 89 aa9.99□□□□□ -0.81
CXCL12-204ENST00000395793 PET117Q6UWS5 81 aa9.99□□□□□ -0.81
CXCL12-204ENST00000395793 OR13C6PQ8NH95 151 aa9.99□□□□□ -0.81
CXCL12-204ENST00000395793 C5orf52A6NGY3 159 aa9.98□□□□□ -0.81
CXCL12-204ENST00000395793 C3orf79P0CE67 100 aa9.97□□□□□ -0.81
CXCL12-204ENST00000395793 SPANXDQ9BXN6 97 aa9.97□□□□□ -0.81
CXCL12-204ENST00000395793 HINT1P49773 126 aaPredicted RBP9.96□□□□□ -0.82
CXCL12-204ENST00000395793 SEC61BP60468 96 aaKnown RBP9.96□□□□□ -0.82
CXCL12-204ENST00000395793 XP32Q5T750 250 aa9.96□□□□□ -0.82
CXCL12-204ENST00000395793 CBY1Q9Y3M2 126 aa9.96□□□□□ -0.82
CXCL12-204ENST00000395793 ELOF1P60002 83 aaKnown RBP9.94□□□□□ -0.82
CXCL12-204ENST00000395793 C6orf99Q4VX62 202 aa9.93□□□□□ -0.82
CXCL12-204ENST00000395793 DHRS4-AS1Q9P1J3 65 aa9.93□□□□□ -0.82
CXCL12-204ENST00000395793 COX7BP24311 80 aa9.92□□□□□ -0.82
CXCL12-204ENST00000395793 HRCT1Q6UXD1 115 aa9.92□□□□□ -0.82
CXCL12-204ENST00000395793 KRTDAPP60985 99 aa9.9□□□□□ -0.82
CXCL12-204ENST00000395793 ANKRD39Q53RE8 183 aa9.9□□□□□ -0.82
CXCL12-204ENST00000395793 COA6Q5JTJ3 125 aaKnown RBP9.9□□□□□ -0.82
CXCL12-204ENST00000395793 LINC00518Q8N0U6 118 aa9.88□□□□□ -0.83
CXCL12-204ENST00000395793 LAMTOR3Q9UHA4 124 aa9.88□□□□□ -0.83
CXCL12-204ENST00000395793 Q1RN00 199 aa9.87□□□□□ -0.83
CXCL12-204ENST00000395793 SLC25A34Q6PIV7 304 aa9.87□□□□□ -0.83
CXCL12-204ENST00000395793 LIMD2Q9BT23 127 aa9.87□□□□□ -0.83
CXCL12-204ENST00000395793 LINC01547P58512 204 aaPredicted RBP9.86□□□□□ -0.83
CXCL12-204ENST00000395793 ATOH7Q8N100 152 aa9.86□□□□□ -0.83
CXCL12-204ENST00000395793 DEFB105AQ8NG35 78 aa9.86□□□□□ -0.83
CXCL12-204ENST00000395793 SCGB1D4Q6XE38 83 aa9.85□□□□□ -0.83
CXCL12-204ENST00000395793 SMIM29Q86T20 159 aa9.85□□□□□ -0.83
CXCL12-204ENST00000395793 TAL2Q16559 108 aa9.84□□□□□ -0.83
CXCL12-204ENST00000395793 TRBV7-6A0A0J9YX20 115 aa9.83□□□□□ -0.84
CXCL12-204ENST00000395793 C9orf92A6NGG3 77 aa9.83□□□□□ -0.84
CXCL12-204ENST00000395793 LCE2CQ5TA81 110 aa9.83□□□□□ -0.84
CXCL12-204ENST00000395793 PCP2Q8IVA1 136 aa9.83□□□□□ -0.84
CXCL12-204ENST00000395793 TEX49A0A1B0GTD5 131 aa9.82□□□□□ -0.84
CXCL12-204ENST00000395793 A0A0G2JQZ4 141 aa9.81□□□□□ -0.84
CXCL12-204ENST00000395793 KRTAP9-6A0A140TA67 174 aa9.81□□□□□ -0.84
CXCL12-204ENST00000395793 IFITM1P13164 125 aa9.81□□□□□ -0.84
CXCL12-204ENST00000395793 CD164Q04900 197 aa9.81□□□□□ -0.84
CXCL12-204ENST00000395793 KRTAP19-2Q3LHN2 52 aa9.81□□□□□ -0.84
CXCL12-204ENST00000395793 MUSTN1Q8IVN3 82 aa9.81□□□□□ -0.84
CXCL12-204ENST00000395793 IGLV5-48A0A075B6I7 105 aa9.8□□□□□ -0.84
CXCL12-204ENST00000395793 A0A1B0GWB2 263 aa9.8□□□□□ -0.84
CXCL12-204ENST00000395793 H7C2G1 150 aa9.8□□□□□ -0.84
CXCL12-204ENST00000395793 PRO1933Q9H354 126 aa9.8□□□□□ -0.84
CXCL12-204ENST00000395793 C20orf202A1L168 122 aa9.79□□□□□ -0.84
CXCL12-204ENST00000395793 A6NDN8 102 aa9.79□□□□□ -0.84
CXCL12-204ENST00000395793 PCOTHQ58A44 107 aa9.79□□□□□ -0.84
CXCL12-204ENST00000395793 Q6ZVH6 145 aa9.77□□□□□ -0.85
CXCL12-204ENST00000395793 COPS9Q8WXC6 57 aa9.76□□□□□ -0.85
CXCL12-204ENST00000395793 Q5XG85 94 aa9.75□□□□□ -0.85
CXCL12-204ENST00000395793 SMIM11BQ8TCY0 68 aa9.75□□□□□ -0.85
CXCL12-204ENST00000395793 AKR1D1P51857 326 aa9.74□□□□□ -0.85
CXCL12-204ENST00000395793 C1orf195Q5TG92 126 aa9.74□□□□□ -0.85
CXCL12-204ENST00000395793 IGLV8-61A0A075B6I0 122 aa9.73□□□□□ -0.85
CXCL12-204ENST00000395793 TRAV13-2A0A0B4J235 113 aa9.7□□□□□ -0.86
CXCL12-204ENST00000395793 A4D1N5 150 aa9.7□□□□□ -0.86
CXCL12-204ENST00000395793 LCE2DQ5TA82 110 aaPredicted RBP9.7□□□□□ -0.86
CXCL12-204ENST00000395793 MT1HP80294 61 aa9.69□□□□□ -0.86
CXCL12-204ENST00000395793 HIST3H2BBQ8N257 126 aa9.67□□□□□ -0.86
CXCL12-204ENST00000395793 NHP2Q9NX24 153 aaKnown RBP9.67□□□□□ -0.86
CXCL12-204ENST00000395793 SNRPEP62304 92 aaKnown RBP9.66□□□□□ -0.86
CXCL12-204ENST00000395793 HIST1H2BLQ99880 126 aa9.66□□□□□ -0.86
CXCL12-204ENST00000395793 LINC00575Q6W349 94 aa9.64□□□□□ -0.87
CXCL12-204ENST00000395793 RPL37P61927 97 aaKnown RBP9.63□□□□□ -0.87
CXCL12-204ENST00000395793 Q6ZQY7 126 aa9.61□□□□□ -0.87
CXCL12-204ENST00000395793 F8WEM9 126 aa9.59□□□□□ -0.87
CXCL12-204ENST00000395793 hADV29S1A0JD25 119 aa9.58□□□□□ -0.88
CXCL12-204ENST00000395793 TCL1BO95988 128 aa9.58□□□□□ -0.88
CXCL12-204ENST00000395793 S100A2P29034 98 aa9.58□□□□□ -0.88
CXCL12-204ENST00000395793 VAMP3Q15836 100 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms