RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 NDUFA12Q9UI09 145 aa3.55□□□□□ -1.84
PTPN20-208ENST00000395727 ZNF706Q9Y5V0 76 aaPredicted RBP3.55□□□□□ -1.84
PTPN20-208ENST00000395727 LEPROTO15243 131 aa3.54□□□□□ -1.84
PTPN20-208ENST00000395727 SNRPEP62304 92 aaKnown RBP3.54□□□□□ -1.84
PTPN20-208ENST00000395727 TPRXLQ17RH7 258 aa3.54□□□□□ -1.84
PTPN20-208ENST00000395727 MEIG1Q5JSS6 88 aa3.54□□□□□ -1.84
PTPN20-208ENST00000395727 SPAG11AQ6PDA7 123 aa3.54□□□□□ -1.84
PTPN20-208ENST00000395727 BOD1L2Q8IYS8 172 aa3.54□□□□□ -1.84
PTPN20-208ENST00000395727 SPRR4Q96PI1 79 aa3.54□□□□□ -1.84
PTPN20-208ENST00000395727 HSPB8Q9UJY1 196 aa3.54□□□□□ -1.84
PTPN20-208ENST00000395727 COLCA2A8K830 154 aa3.53□□□□□ -1.84
PTPN20-208ENST00000395727 J3QQQ9 107 aa3.53□□□□□ -1.84
PTPN20-208ENST00000395727 ATP6V1G1O75348 118 aa3.53□□□□□ -1.84
PTPN20-208ENST00000395727 DPM2O94777 84 aa3.53□□□□□ -1.84
PTPN20-208ENST00000395727 NDUFC2O95298 119 aa3.53□□□□□ -1.84
PTPN20-208ENST00000395727 TSPEAR-AS2P59090 65 aa3.53□□□□□ -1.84
PTPN20-208ENST00000395727 HERVK_113P61574 105 aa3.53□□□□□ -1.84
PTPN20-208ENST00000395727 S100A12P80511 92 aa3.53□□□□□ -1.84
PTPN20-208ENST00000395727 LINC00483Q53H64 154 aa3.53□□□□□ -1.84
PTPN20-208ENST00000395727 HIGD2AQ9BW72 106 aa3.53□□□□□ -1.84
PTPN20-208ENST00000395727 ANAPC11Q9NYG5 84 aa3.53□□□□□ -1.84
PTPN20-208ENST00000395727 TRBV10-3A0A0K0K1G6 114 aa3.52□□□□□ -1.85
PTPN20-208ENST00000395727 A0A0U1RRA0 63 aa3.52□□□□□ -1.85
PTPN20-208ENST00000395727 TSPAN13O95857 204 aa3.52□□□□□ -1.85
PTPN20-208ENST00000395727 IGKCP01834 107 aa3.52□□□□□ -1.85
PTPN20-208ENST00000395727 RPS29P62273 56 aaKnown RBP3.52□□□□□ -1.85
PTPN20-208ENST00000395727 SPANXB1Q9NS25 103 aaPredicted RBP3.52□□□□□ -1.85
PTPN20-208ENST00000395727 ETDCA0A1B0GVM5 59 aa3.51□□□□□ -1.85
PTPN20-208ENST00000395727 C5orf52A6NGY3 159 aa3.51□□□□□ -1.85
PTPN20-208ENST00000395727 E9PLD3 99 aa3.51□□□□□ -1.85
PTPN20-208ENST00000395727 NCR3O14931 201 aa3.51□□□□□ -1.85
PTPN20-208ENST00000395727 KRTAP10-6P60371 365 aaPredicted RBP3.51□□□□□ -1.85
PTPN20-208ENST00000395727 Q6ZRX8 168 aa3.51□□□□□ -1.85
PTPN20-208ENST00000395727 FP248Q71RG6 208 aaPredicted RBP3.51□□□□□ -1.85
PTPN20-208ENST00000395727 C3orf22Q8N5N4 141 aa3.51□□□□□ -1.85
PTPN20-208ENST00000395727 SMCR5Q8TEV8 140 aa3.51□□□□□ -1.85
PTPN20-208ENST00000395727 LPAP08519 4548 aa3.51□□□□□ -1.85
PTPN20-208ENST00000395727 A0A0U1RQV1 116 aa3.5□□□□□ -1.85
PTPN20-208ENST00000395727 H0Y8G0 127 aa3.5□□□□□ -1.85
PTPN20-208ENST00000395727 HIST1H2BKO60814 126 aa3.5□□□□□ -1.85
PTPN20-208ENST00000395727 IGLV6-57P01721 117 aa3.5□□□□□ -1.85
PTPN20-208ENST00000395727 HIST1H2BJP06899 126 aa3.5□□□□□ -1.85
PTPN20-208ENST00000395727 LGALS3P17931 250 aaKnown RBP3.5□□□□□ -1.85
PTPN20-208ENST00000395727 HIST1H2BOP23527 126 aa3.5□□□□□ -1.85
PTPN20-208ENST00000395727 DDTP30046 118 aa3.5□□□□□ -1.85
PTPN20-208ENST00000395727 HIST1H2BBP33778 126 aa3.5□□□□□ -1.85
PTPN20-208ENST00000395727 HIST1H2BDP58876 126 aa3.5□□□□□ -1.85
PTPN20-208ENST00000395727 HIST1H2BCP62807 126 aa3.5□□□□□ -1.85
PTPN20-208ENST00000395727 HIST2H2BEQ16778 126 aa3.5□□□□□ -1.85
PTPN20-208ENST00000395727 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.5□□□□□ -1.85
PTPN20-208ENST00000395727 HIST1H2BHQ93079 126 aa3.5□□□□□ -1.85
PTPN20-208ENST00000395727 LITAFQ99732 161 aa3.5□□□□□ -1.85
PTPN20-208ENST00000395727 HIST1H2BNQ99877 126 aa3.5□□□□□ -1.85
PTPN20-208ENST00000395727 HIST1H2BMQ99879 126 aa3.5□□□□□ -1.85
PTPN20-208ENST00000395727 MIEN1Q9BRT3 115 aa3.5□□□□□ -1.85
PTPN20-208ENST00000395727 CBY1Q9Y3M2 126 aa3.5□□□□□ -1.85
PTPN20-208ENST00000395727 A0A0J9YXY3 114 aa3.49□□□□□ -1.85
PTPN20-208ENST00000395727 SYS1-DBNDD2H3BUS1 97 aa3.49□□□□□ -1.85
PTPN20-208ENST00000395727 TIMM17BO60830 172 aa3.49□□□□□ -1.85
PTPN20-208ENST00000395727 SPINK1P00995 79 aa3.49□□□□□ -1.85
PTPN20-208ENST00000395727 FABP4P15090 132 aa3.49□□□□□ -1.85
PTPN20-208ENST00000395727 LINC01545Q5VT33 79 aa3.49□□□□□ -1.85
PTPN20-208ENST00000395727 SLC7A5P1Q8MH63 180 aa3.49□□□□□ -1.85
PTPN20-208ENST00000395727 RNF213Q63HN8 5207 aa3.48□□□□□ -1.85
PTPN20-208ENST00000395727 IGLV7-46A0A075B6I9 117 aa3.48□□□□□ -1.85
PTPN20-208ENST00000395727 JOSD1Q15040 202 aaPredicted RBP3.48□□□□□ -1.85
PTPN20-208ENST00000395727 COA6Q5JTJ3 125 aaKnown RBP3.48□□□□□ -1.85
PTPN20-208ENST00000395727 PET117Q6UWS5 81 aa3.48□□□□□ -1.85
PTPN20-208ENST00000395727 SSBP3-AS1Q7Z2R9 100 aa3.48□□□□□ -1.85
PTPN20-208ENST00000395727 NOTCH2NLQ7Z3S9 236 aa3.48□□□□□ -1.85
PTPN20-208ENST00000395727 DAND5Q8N907 189 aa3.48□□□□□ -1.85
PTPN20-208ENST00000395727 RETNLBQ9BQ08 111 aa3.48□□□□□ -1.85
PTPN20-208ENST00000395727 Q9BRP9 147 aa3.48□□□□□ -1.85
PTPN20-208ENST00000395727 PPDPFQ9H3Y8 114 aa3.48□□□□□ -1.85
PTPN20-208ENST00000395727 TRAV23DV6A0A075B6W5 121 aa3.47□□□□□ -1.85
PTPN20-208ENST00000395727 S100A7L2Q5SY68 101 aa3.47□□□□□ -1.85
PTPN20-208ENST00000395727 SOSTDC1Q6X4U4 206 aa3.47□□□□□ -1.85
PTPN20-208ENST00000395727 Q8NBF4 154 aa3.47□□□□□ -1.85
PTPN20-208ENST00000395727 PMCHL2Q9BQD1 86 aa3.47□□□□□ -1.85
PTPN20-208ENST00000395727 SPANXCQ9NY87 97 aa3.47□□□□□ -1.85
PTPN20-208ENST00000395727 IGLV9-49A0A0B4J1Y8 123 aa3.46□□□□□ -1.86
PTPN20-208ENST00000395727 ZNF73O43830 326 aaPredicted RBP3.46□□□□□ -1.86
PTPN20-208ENST00000395727 ERC2-IT1O76042 136 aa3.46□□□□□ -1.86
PTPN20-208ENST00000395727 SPRR1BP22528 89 aa3.46□□□□□ -1.86
PTPN20-208ENST00000395727 KRTAP13-3Q3SY46 172 aa3.46□□□□□ -1.86
PTPN20-208ENST00000395727 ADAMTSL4-AS1Q5T5F5 129 aa3.46□□□□□ -1.86
PTPN20-208ENST00000395727 AKR1D1P51857 326 aa3.45□□□□□ -1.86
PTPN20-208ENST00000395727 Q8N377 158 aa3.45□□□□□ -1.86
PTPN20-208ENST00000395727 LINC00308Q8TCZ7 52 aa3.45□□□□□ -1.86
PTPN20-208ENST00000395727 SPANXDQ9BXN6 97 aa3.45□□□□□ -1.86
PTPN20-208ENST00000395727 C3orf79P0CE67 100 aa3.44□□□□□ -1.86
PTPN20-208ENST00000395727 HINT1P49773 126 aaPredicted RBP3.44□□□□□ -1.86
PTPN20-208ENST00000395727 MOBPQ13875 183 aa3.44□□□□□ -1.86
PTPN20-208ENST00000395727 LINC00518Q8N0U6 118 aa3.44□□□□□ -1.86
PTPN20-208ENST00000395727 DHRS4-AS1Q9P1J3 65 aa3.44□□□□□ -1.86
PTPN20-208ENST00000395727 TRBV7-6A0A0J9YX20 115 aa3.43□□□□□ -1.86
PTPN20-208ENST00000395727 ZNF815PA8K554 130 aa3.43□□□□□ -1.86
PTPN20-208ENST00000395727 SLC25A20O43772 301 aa3.43□□□□□ -1.86
PTPN20-208ENST00000395727 ELOF1P60002 83 aaKnown RBP3.43□□□□□ -1.86
PTPN20-208ENST00000395727 ASB16-AS1Q495Z4 193 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms