RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 LPAP08519 4548 aa17.88■□□□□ 0.45
CMTM4-202ENST00000394106 SPANXCQ9NY87 97 aa17.87■□□□□ 0.45
CMTM4-202ENST00000394106 RNF213Q63HN8 5207 aa17.87■□□□□ 0.45
CMTM4-202ENST00000394106 ANKRD39Q53RE8 183 aa17.86■□□□□ 0.45
CMTM4-202ENST00000394106 Q6ZRX8 168 aa17.86■□□□□ 0.45
CMTM4-202ENST00000394106 ERC2-IT1O76042 136 aa17.84■□□□□ 0.45
CMTM4-202ENST00000394106 SCGB1D4Q6XE38 83 aa17.84■□□□□ 0.45
CMTM4-202ENST00000394106 Q9BRP9 147 aa17.84■□□□□ 0.45
CMTM4-202ENST00000394106 ZNF73O43830 326 aaPredicted RBP17.83■□□□□ 0.44
CMTM4-202ENST00000394106 GAGE2AQ6NT46 116 aa17.82■□□□□ 0.44
CMTM4-202ENST00000394106 OR13C6PQ8NH95 151 aa17.82■□□□□ 0.44
CMTM4-202ENST00000394106 HIST3H2BBQ8N257 126 aa17.81■□□□□ 0.44
CMTM4-202ENST00000394106 S100A2P29034 98 aa17.8■□□□□ 0.44
CMTM4-202ENST00000394106 AKR1D1P51857 326 aa17.8■□□□□ 0.44
CMTM4-202ENST00000394106 RETNLBQ9BQ08 111 aa17.79■□□□□ 0.44
CMTM4-202ENST00000394106 JOSD1Q15040 202 aaPredicted RBP17.78■□□□□ 0.44
CMTM4-202ENST00000394106 LINC00483Q53H64 154 aa17.78■□□□□ 0.44
CMTM4-202ENST00000394106 CBY1Q9Y3M2 126 aa17.78■□□□□ 0.44
CMTM4-202ENST00000394106 HIST1H2BLQ99880 126 aa17.77■□□□□ 0.44
CMTM4-202ENST00000394106 SPANXDQ9BXN6 97 aa17.76■□□□□ 0.43
CMTM4-202ENST00000394106 PCP2Q8IVA1 136 aa17.75■□□□□ 0.43
CMTM4-202ENST00000394106 HINT1P49773 126 aaPredicted RBP17.74■□□□□ 0.43
CMTM4-202ENST00000394106 Q8NBF4 154 aa17.73■□□□□ 0.43
CMTM4-202ENST00000394106 S100A6P06703 90 aa17.72■□□□□ 0.43
CMTM4-202ENST00000394106 C4orf48Q5BLP8 95 aa17.71■□□□□ 0.43
CMTM4-202ENST00000394106 SPAG11AQ6PDA7 123 aa17.71■□□□□ 0.43
CMTM4-202ENST00000394106 LINC00518Q8N0U6 118 aa17.71■□□□□ 0.43
CMTM4-202ENST00000394106 CTAG1AP78358 180 aa17.7■□□□□ 0.42
CMTM4-202ENST00000394106 IGLV9-49A0A0B4J1Y8 123 aa17.69■□□□□ 0.42
CMTM4-202ENST00000394106 SNRPEP62304 92 aaKnown RBP17.69■□□□□ 0.42
CMTM4-202ENST00000394106 COPS9Q8WXC6 57 aa17.68■□□□□ 0.42
CMTM4-202ENST00000394106 IFITM1P13164 125 aa17.66■□□□□ 0.42
CMTM4-202ENST00000394106 MOBPQ13875 183 aa17.66■□□□□ 0.42
CMTM4-202ENST00000394106 ST20-AS1Q8NBB2 130 aa17.65■□□□□ 0.42
CMTM4-202ENST00000394106 Q6ZVH6 145 aa17.64■□□□□ 0.41
CMTM4-202ENST00000394106 MUSTN1Q8IVN3 82 aa17.63■□□□□ 0.41
CMTM4-202ENST00000394106 HSBP1L1C9JCN9 74 aa17.61■□□□□ 0.41
CMTM4-202ENST00000394106 C6orf99Q4VX62 202 aa17.6■□□□□ 0.41
CMTM4-202ENST00000394106 COX7BP24311 80 aa17.59■□□□□ 0.41
CMTM4-202ENST00000394106 DHRS4-AS1Q9P1J3 65 aa17.59■□□□□ 0.41
CMTM4-202ENST00000394106 IGLV7-46A0A075B6I9 117 aa17.57■□□□□ 0.4
CMTM4-202ENST00000394106 A6NDN8 102 aa17.57■□□□□ 0.4
CMTM4-202ENST00000394106 SSBP3-AS1Q7Z2R9 100 aa17.57■□□□□ 0.4
CMTM4-202ENST00000394106 C5orf52A6NGY3 159 aa17.56■□□□□ 0.4
CMTM4-202ENST00000394106 ELOF1P60002 83 aaKnown RBP17.56■□□□□ 0.4
CMTM4-202ENST00000394106 C9orf153Q5TBE3 101 aa17.56■□□□□ 0.4
CMTM4-202ENST00000394106 SPINK1P00995 79 aa17.55■□□□□ 0.4
CMTM4-202ENST00000394106 SCGB1D1O95968 90 aa17.52■□□□□ 0.4
CMTM4-202ENST00000394106 TPRXLQ17RH7 258 aa17.48■□□□□ 0.39
CMTM4-202ENST00000394106 TRAV13-2A0A0B4J235 113 aa17.46■□□□□ 0.39
CMTM4-202ENST00000394106 TRBV7-6A0A0J9YX20 115 aa17.46■□□□□ 0.39
CMTM4-202ENST00000394106 CDIP1Q9H305 208 aa17.46■□□□□ 0.39
CMTM4-202ENST00000394106 SPRR1BP22528 89 aa17.45■□□□□ 0.38
CMTM4-202ENST00000394106 A0A1B0GWB2 263 aa17.44■□□□□ 0.38
CMTM4-202ENST00000394106 SLC25A34Q6PIV7 304 aa17.44■□□□□ 0.38
CMTM4-202ENST00000394106 FP248Q71RG6 208 aaPredicted RBP17.44■□□□□ 0.38
CMTM4-202ENST00000394106 TAL2Q16559 108 aa17.42■□□□□ 0.38
CMTM4-202ENST00000394106 DEFB105AQ8NG35 78 aa17.42■□□□□ 0.38
CMTM4-202ENST00000394106 RPS29P62273 56 aaKnown RBP17.4■□□□□ 0.38
CMTM4-202ENST00000394106 SMIM11BQ8TCY0 68 aa17.4■□□□□ 0.38
CMTM4-202ENST00000394106 LAMTOR3Q9UHA4 124 aa17.4■□□□□ 0.38
CMTM4-202ENST00000394106 Q8N377 158 aa17.37■□□□□ 0.37
CMTM4-202ENST00000394106 A4D1N5 150 aa17.36■□□□□ 0.37
CMTM4-202ENST00000394106 Q1RN00 199 aa17.35■□□□□ 0.37
CMTM4-202ENST00000394106 TEX49A0A1B0GTD5 131 aa17.34■□□□□ 0.37
CMTM4-202ENST00000394106 SLC25A20O43772 301 aa17.33■□□□□ 0.36
CMTM4-202ENST00000394106 COX8AP10176 69 aa17.33■□□□□ 0.36
CMTM4-202ENST00000394106 HIST1H4GQ99525 98 aa17.31■□□□□ 0.36
CMTM4-202ENST00000394106 HRCT1Q6UXD1 115 aa17.3■□□□□ 0.36
CMTM4-202ENST00000394106 NHP2Q9NX24 153 aaKnown RBP17.28■□□□□ 0.36
CMTM4-202ENST00000394106 KRTAP13-3Q3SY46 172 aa17.27■□□□□ 0.36
CMTM4-202ENST00000394106 C12orf57Q99622 126 aa17.27■□□□□ 0.36
CMTM4-202ENST00000394106 VAMP3Q15836 100 aa17.26■□□□□ 0.35
CMTM4-202ENST00000394106 IGLV5-48A0A075B6I7 105 aa17.25■□□□□ 0.35
CMTM4-202ENST00000394106 LINC01547P58512 204 aaPredicted RBP17.25■□□□□ 0.35
CMTM4-202ENST00000394106 C14orf144Q96I85 54 aa17.24■□□□□ 0.35
CMTM4-202ENST00000394106 PAM16Q9Y3D7 125 aa17.24■□□□□ 0.35
CMTM4-202ENST00000394106 DLEU1O43261 78 aa17.23■□□□□ 0.35
CMTM4-202ENST00000394106 SMIM29Q86T20 159 aa17.23■□□□□ 0.35
CMTM4-202ENST00000394106 SPATA45Q537H7 98 aa17.22■□□□□ 0.35
CMTM4-202ENST00000394106 PRO1933Q9H354 126 aa17.21■□□□□ 0.35
CMTM4-202ENST00000394106 MUC2Q02817 5179 aa17.2■□□□□ 0.34
CMTM4-202ENST00000394106 LIMD2Q9BT23 127 aa17.19■□□□□ 0.34
CMTM4-202ENST00000394106 VAMP8Q9BV40 100 aa17.19■□□□□ 0.34
CMTM4-202ENST00000394106 LINC00575Q6W349 94 aa17.18■□□□□ 0.34
CMTM4-202ENST00000394106 hADV29S1A0JD25 119 aa17.12■□□□□ 0.33
CMTM4-202ENST00000394106 H7C2G1 150 aa17.12■□□□□ 0.33
CMTM4-202ENST00000394106 CD164Q04900 197 aa17.12■□□□□ 0.33
CMTM4-202ENST00000394106 A0A0G2JQZ4 141 aa17.11■□□□□ 0.33
CMTM4-202ENST00000394106 HIGD1BQ9P298 99 aa17.11■□□□□ 0.33
CMTM4-202ENST00000394106 MUC17Q685J3 4493 aa17.1■□□□□ 0.33
CMTM4-202ENST00000394106 A0A0U1RQV1 116 aa17.1■□□□□ 0.33
CMTM4-202ENST00000394106 Q6ZQY7 126 aa17.09■□□□□ 0.33
CMTM4-202ENST00000394106 BVES-AS1Q5T3Y7 98 aa17.07■□□□□ 0.32
CMTM4-202ENST00000394106 C2orf91Q6ZV80 131 aa17.07■□□□□ 0.32
CMTM4-202ENST00000394106 CFC1BP0CG36 223 aa17.06■□□□□ 0.32
CMTM4-202ENST00000394106 CFC1P0CG37 223 aa17.06■□□□□ 0.32
CMTM4-202ENST00000394106 RAB37Q96AX2 223 aa17.06■□□□□ 0.32
CMTM4-202ENST00000394106 F8WEM9 126 aa17.05■□□□□ 0.32
CMTM4-202ENST00000394106 ASB16-AS1Q495Z4 193 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms