RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 A0A1W2PNM2 257 aa10.55□□□□□ -0.72
SHANK1-204ENST00000391814 DNAH10OSP0CZ25 163 aa10.54□□□□□ -0.72
SHANK1-204ENST00000391814 CSNK1G2-AS1Q8NCQ2 148 aa10.54□□□□□ -0.72
SHANK1-204ENST00000391814 SMR3BP02814 79 aaPredicted RBP10.53□□□□□ -0.72
SHANK1-204ENST00000391814 Q75L30 129 aa10.52□□□□□ -0.73
SHANK1-204ENST00000391814 FAM104AQ969W3 186 aa10.51□□□□□ -0.73
SHANK1-204ENST00000391814 KRTAP24-1Q3LI83 254 aa10.51□□□□□ -0.73
SHANK1-204ENST00000391814 FP248Q71RG6 208 aaPredicted RBP10.5□□□□□ -0.73
SHANK1-204ENST00000391814 JMJD1CQ15652 2540 aa10.5□□□□□ -0.73
SHANK1-204ENST00000391814 ANAPC11Q9NYG5 84 aa10.5□□□□□ -0.73
SHANK1-204ENST00000391814 ZNF575Q86XF7 245 aa10.5□□□□□ -0.73
SHANK1-204ENST00000391814 PRAC1Q96KF2 57 aa10.5□□□□□ -0.73
SHANK1-204ENST00000391814 WDR87Q6ZQQ6 2873 aa10.49□□□□□ -0.73
SHANK1-204ENST00000391814 Q8N1X5 172 aa10.49□□□□□ -0.73
SHANK1-204ENST00000391814 C9orf163Q8N9P6 203 aa10.48□□□□□ -0.73
SHANK1-204ENST00000391814 IGLV5-37A0A075B6J1 123 aa10.48□□□□□ -0.73
SHANK1-204ENST00000391814 IGLV5-48A0A075B6I7 105 aa10.47□□□□□ -0.73
SHANK1-204ENST00000391814 PRR34Q9NV39 138 aa10.47□□□□□ -0.73
SHANK1-204ENST00000391814 LUZP6Q538Z0 58 aa10.46□□□□□ -0.74
SHANK1-204ENST00000391814 PLA2G2DQ9UNK4 145 aa10.46□□□□□ -0.74
SHANK1-204ENST00000391814 PRR26Q8N8Z3 221 aa10.44□□□□□ -0.74
SHANK1-204ENST00000391814 LINC00304Q8N9R0 145 aa10.42□□□□□ -0.74
SHANK1-204ENST00000391814 TLX1NBP0CAT3 122 aa10.4□□□□□ -0.74
SHANK1-204ENST00000391814 GOLGB1Q14789 3259 aaKnown RBP10.4□□□□□ -0.75
SHANK1-204ENST00000391814 M0R2T5 61 aa10.39□□□□□ -0.75
SHANK1-204ENST00000391814 MYO9AB2RTY4 2548 aa10.39□□□□□ -0.75
SHANK1-204ENST00000391814 GIG44P09565 113 aaPredicted RBP10.38□□□□□ -0.75
SHANK1-204ENST00000391814 IGLV7-46A0A075B6I9 117 aa10.38□□□□□ -0.75
SHANK1-204ENST00000391814 ZFYVE26Q68DK2 2539 aa10.38□□□□□ -0.75
SHANK1-204ENST00000391814 OXTP01178 125 aa10.38□□□□□ -0.75
SHANK1-204ENST00000391814 LRRK2Q5S007 2527 aa10.37□□□□□ -0.75
SHANK1-204ENST00000391814 TLN1Q9Y490 2541 aaKnown RBP10.37□□□□□ -0.75
SHANK1-204ENST00000391814 Q5VV11 94 aa10.37□□□□□ -0.75
SHANK1-204ENST00000391814 ZNF861PO60384 105 aa10.36□□□□□ -0.75
SHANK1-204ENST00000391814 WWC2-AS2Q96NR7 200 aa10.36□□□□□ -0.75
SHANK1-204ENST00000391814 ABCA12Q86UK0 2595 aa10.36□□□□□ -0.75
SHANK1-204ENST00000391814 ZNF462Q96JM2 2506 aa10.35□□□□□ -0.75
SHANK1-204ENST00000391814 Q8N9P0 234 aaPredicted RBP10.34□□□□□ -0.75
SHANK1-204ENST00000391814 CSAG1Q6PB30 78 aa10.33□□□□□ -0.76
SHANK1-204ENST00000391814 CASC10Q5T4H9 136 aa10.33□□□□□ -0.76
SHANK1-204ENST00000391814 LINC01558Q9Y6Z2 57 aa10.32□□□□□ -0.76
SHANK1-204ENST00000391814 CNBPP62633 177 aaKnown RBP10.32□□□□□ -0.76
SHANK1-204ENST00000391814 FN1P02751 2386 aaKnown RBP10.3□□□□□ -0.76
SHANK1-204ENST00000391814 SPRR4Q96PI1 79 aa10.3□□□□□ -0.76
SHANK1-204ENST00000391814 A0A096LNT2 108 aa10.3□□□□□ -0.76
SHANK1-204ENST00000391814 TLN2Q9Y4G6 2542 aa10.3□□□□□ -0.76
SHANK1-204ENST00000391814 LINC00612Q8N6U2 182 aa10.29□□□□□ -0.76
SHANK1-204ENST00000391814 KRTAP10-11P60412 298 aa10.29□□□□□ -0.76
SHANK1-204ENST00000391814 CENPFP49454 3210 aa10.27□□□□□ -0.76
SHANK1-204ENST00000391814 SPINK7P58062 85 aa10.27□□□□□ -0.77
SHANK1-204ENST00000391814 F8P00451 2351 aa10.25□□□□□ -0.77
SHANK1-204ENST00000391814 HRES1P13985 223 aa10.25□□□□□ -0.77
SHANK1-204ENST00000391814 C19orf73Q9NVV2 129 aa10.25□□□□□ -0.77
SHANK1-204ENST00000391814 A0A1B0GU33 70 aa10.23□□□□□ -0.77
SHANK1-204ENST00000391814 CAMK2N1Q7Z7J9 78 aa10.23□□□□□ -0.77
SHANK1-204ENST00000391814 PSORS1C2Q9UIG4 136 aa10.23□□□□□ -0.77
SHANK1-204ENST00000391814 IGLV7-43P04211 117 aa10.23□□□□□ -0.77
SHANK1-204ENST00000391814 KRTAP10-3P60369 221 aa10.21□□□□□ -0.78
SHANK1-204ENST00000391814 ANKRD11Q6UB99 2663 aaPredicted RBP10.2□□□□□ -0.78
SHANK1-204ENST00000391814 SETD2Q9BYW2 2564 aaPredicted RBP10.2□□□□□ -0.78
SHANK1-204ENST00000391814 USP9XQ93008 2570 aaPredicted RBP10.19□□□□□ -0.78
SHANK1-204ENST00000391814 LINC00483Q53H64 154 aa10.19□□□□□ -0.78
SHANK1-204ENST00000391814 CEP295Q9C0D2 2601 aa10.18□□□□□ -0.78
SHANK1-204ENST00000391814 A0A087WTM6 91 aa10.16□□□□□ -0.78
SHANK1-204ENST00000391814 MMP24-AS1A0A0U1RRL7 71 aa10.14□□□□□ -0.79
SHANK1-204ENST00000391814 CHD8Q9HCK8 2581 aa10.14□□□□□ -0.79
SHANK1-204ENST00000391814 K7EIL1 84 aa10.13□□□□□ -0.79
SHANK1-204ENST00000391814 Q8NDZ9 215 aa10.13□□□□□ -0.79
SHANK1-204ENST00000391814 SPTBN4Q9H254 2564 aa10.11□□□□□ -0.79
SHANK1-204ENST00000391814 Q6ZSA8 131 aa10.06□□□□□ -0.8
SHANK1-204ENST00000391814 DMAC1Q96GE9 116 aa10.04□□□□□ -0.8
SHANK1-204ENST00000391814 USP9YO00507 2555 aaPredicted RBP10.04□□□□□ -0.8
SHANK1-204ENST00000391814 UTRNP46939 3433 aa10.04□□□□□ -0.8
SHANK1-204ENST00000391814 A0A0A0MQY5 61 aa10.03□□□□□ -0.8
SHANK1-204ENST00000391814 CR1P17927 2039 aa10.02□□□□□ -0.81
SHANK1-204ENST00000391814 POLQO75417 2590 aa10.02□□□□□ -0.81
SHANK1-204ENST00000391814 PKD1L2Q7Z442 2459 aa10.01□□□□□ -0.81
SHANK1-204ENST00000391814 MTORP42345 2549 aa9.99□□□□□ -0.81
SHANK1-204ENST00000391814 FASNP49327 2511 aaKnown RBP9.99□□□□□ -0.81
SHANK1-204ENST00000391814 Q5W150 140 aa9.99□□□□□ -0.81
SHANK1-204ENST00000391814 ANKRD17O75179 2603 aaKnown RBP9.97□□□□□ -0.81
SHANK1-204ENST00000391814 ACANP16112 2415 aa9.96□□□□□ -0.82
SHANK1-204ENST00000391814 ROMO1P60602 79 aa9.92□□□□□ -0.82
SHANK1-204ENST00000391814 LINC00472Q9H8W2 130 aa9.91□□□□□ -0.82
SHANK1-204ENST00000391814 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.91□□□□□ -0.82
SHANK1-204ENST00000391814 ZCCHC13Q8WW36 166 aaKnown RBP9.91□□□□□ -0.82
SHANK1-204ENST00000391814 S4R3F8 94 aa9.91□□□□□ -0.82
SHANK1-204ENST00000391814 SPRR1AP35321 89 aa9.86□□□□□ -0.83
SHANK1-204ENST00000391814 KRTAP26-1Q6PEX3 210 aa9.85□□□□□ -0.83
SHANK1-204ENST00000391814 BPTFQ12830 3046 aa9.84□□□□□ -0.83
SHANK1-204ENST00000391814 PCNTO95613 3336 aa9.82□□□□□ -0.84
SHANK1-204ENST00000391814 H1FX-AS1Q4G0G2 97 aa9.81□□□□□ -0.84
SHANK1-204ENST00000391814 A6NN06 94 aa9.81□□□□□ -0.84
SHANK1-204ENST00000391814 TNP2Q05952 138 aa9.81□□□□□ -0.84
SHANK1-204ENST00000391814 ASB16-AS1Q495Z4 193 aa9.78□□□□□ -0.84
SHANK1-204ENST00000391814 R4GN34 69 aa9.77□□□□□ -0.84
SHANK1-204ENST00000391814 Q5VSD8 79 aa9.77□□□□□ -0.85
SHANK1-204ENST00000391814 SPATA8Q6RVD6 105 aa9.76□□□□□ -0.85
SHANK1-204ENST00000391814 RPL37P61927 97 aaKnown RBP9.75□□□□□ -0.85
SHANK1-204ENST00000391814 DNAH12Q6ZR08 3092 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms