RNA–Protein interactions for RNA: ENST00000391248.1

RNU1-78P-201, Transcript of RNA, U1 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU1-78P, Length 165 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-78P-201ENST00000391248 TRBV7-3A0A075B6L6 115 aa0.73□□□□□ -2.29
RNU1-78P-201ENST00000391248 TRGV2A0A075B6R0 118 aa0.73□□□□□ -2.29
RNU1-78P-201ENST00000391248 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.73□□□□□ -2.29
RNU1-78P-201ENST00000391248 A0A087WTM6 91 aa0.73□□□□□ -2.29
RNU1-78P-201ENST00000391248 TRAV22A0A0B4J277 110 aa0.73□□□□□ -2.29
RNU1-78P-201ENST00000391248 CHKB-CPT1BH3BT56 60 aa0.73□□□□□ -2.29
RNU1-78P-201ENST00000391248 J3QRE1 110 aa0.73□□□□□ -2.29
RNU1-78P-201ENST00000391248 SIX6O95475 246 aa0.73□□□□□ -2.29
RNU1-78P-201ENST00000391248 KRTAP10-1P60331 282 aa0.73□□□□□ -2.29
RNU1-78P-201ENST00000391248 SSBP1Q04837 148 aaKnown RBP0.73□□□□□ -2.29
RNU1-78P-201ENST00000391248 TDRG1Q3Y452 100 aa0.73□□□□□ -2.29
RNU1-78P-201ENST00000391248 ALKAL2Q6UX46 152 aa0.73□□□□□ -2.29
RNU1-78P-201ENST00000391248 ZNF720Q7Z2F6 126 aa0.73□□□□□ -2.29
RNU1-78P-201ENST00000391248 VMO1Q7Z5L0 202 aa0.73□□□□□ -2.29
RNU1-78P-201ENST00000391248 Q86TA4 180 aa0.73□□□□□ -2.29
RNU1-78P-201ENST00000391248 DEFB119Q8N690 84 aa0.73□□□□□ -2.29
RNU1-78P-201ENST00000391248 SERP2Q8N6R1 65 aa0.73□□□□□ -2.29
RNU1-78P-201ENST00000391248 FAM167A-AS1Q96KT0 104 aa0.73□□□□□ -2.29
RNU1-78P-201ENST00000391248 MGST2Q99735 147 aa0.73□□□□□ -2.29
RNU1-78P-201ENST00000391248 NXT2Q9NPJ8 142 aaKnown RBP0.73□□□□□ -2.29
RNU1-78P-201ENST00000391248 TMEM14CQ9P0S9 112 aa0.73□□□□□ -2.29
RNU1-78P-201ENST00000391248 UQCR10Q9UDW1 63 aa0.73□□□□□ -2.29
RNU1-78P-201ENST00000391248 PRO1854Q9UHT4 67 aa0.73□□□□□ -2.29
RNU1-78P-201ENST00000391248 SPCS1Q9Y6A9 102 aa0.73□□□□□ -2.29
RNU1-78P-201ENST00000391248 V9GYH0 126 aa0.73□□□□□ -2.29
RNU1-78P-201ENST00000391248 WNK2Q9Y3S1 2297 aa0.73□□□□□ -2.29
RNU1-78P-201ENST00000391248 ARFGEF3Q5TH69 2177 aa0.72□□□□□ -2.29
RNU1-78P-201ENST00000391248 A0A1W2PPM0 123 aa0.72□□□□□ -2.29
RNU1-78P-201ENST00000391248 IGLC7A0M8Q6 106 aa0.72□□□□□ -2.29
RNU1-78P-201ENST00000391248 FAM223BA6NKX1 122 aa0.72□□□□□ -2.29
RNU1-78P-201ENST00000391248 H7BZZ5 65 aa0.72□□□□□ -2.29
RNU1-78P-201ENST00000391248 HMGN4O00479 90 aa0.72□□□□□ -2.29
RNU1-78P-201ENST00000391248 PPP1R17O96001 155 aa0.72□□□□□ -2.29
RNU1-78P-201ENST00000391248 IGHV3-30P01768 117 aa0.72□□□□□ -2.29
RNU1-78P-201ENST00000391248 IGKV4-1P06312 121 aa0.72□□□□□ -2.29
RNU1-78P-201ENST00000391248 IGHV3-30-5P0DP03 117 aa0.72□□□□□ -2.29
RNU1-78P-201ENST00000391248 CCL18P55774 89 aa0.72□□□□□ -2.29
RNU1-78P-201ENST00000391248 LRP2P98164 4655 aa0.72□□□□□ -2.29
RNU1-78P-201ENST00000391248 PMCHL1Q16048 86 aa0.72□□□□□ -2.29
RNU1-78P-201ENST00000391248 SPATA45Q537H7 98 aa0.72□□□□□ -2.29
RNU1-78P-201ENST00000391248 FAM223AQ8IWN6 122 aa0.72□□□□□ -2.29
RNU1-78P-201ENST00000391248 C5orf56Q8N8D9 126 aa0.72□□□□□ -2.29
RNU1-78P-201ENST00000391248 COX7B2Q8TF08 81 aa0.72□□□□□ -2.29
RNU1-78P-201ENST00000391248 S100A16Q96FQ6 103 aaKnown RBP0.72□□□□□ -2.29
RNU1-78P-201ENST00000391248 TRGV9Q99603 122 aa0.72□□□□□ -2.29
RNU1-78P-201ENST00000391248 KRTAP4-2Q9BYR5 136 aa0.72□□□□□ -2.29
RNU1-78P-201ENST00000391248 BPESC1Q9GZL8 116 aa0.72□□□□□ -2.29
RNU1-78P-201ENST00000391248 DYNLRB1Q9NP97 96 aa0.72□□□□□ -2.29
RNU1-78P-201ENST00000391248 PRO0461Q9UI25 63 aa0.72□□□□□ -2.29
RNU1-78P-201ENST00000391248 LENEPQ9Y5L5 61 aa0.72□□□□□ -2.29
RNU1-78P-201ENST00000391248 FSIP2Q5CZC0 6907 aa0.72□□□□□ -2.29
RNU1-78P-201ENST00000391248 IGKV2-40A0A087WW87 121 aaPredicted RBP0.71□□□□□ -2.3
RNU1-78P-201ENST00000391248 LOC110117498A0A087WWA1 95 aa0.71□□□□□ -2.3
RNU1-78P-201ENST00000391248 IGLV3-32A0A0A0MS00 114 aa0.71□□□□□ -2.3
RNU1-78P-201ENST00000391248 HIGD1CA8MV81 97 aa0.71□□□□□ -2.3
RNU1-78P-201ENST00000391248 INE1O15225 51 aa0.71□□□□□ -2.3
RNU1-78P-201ENST00000391248 NDUFC1O43677 76 aa0.71□□□□□ -2.3
RNU1-78P-201ENST00000391248 IGKV2D-40P01614 121 aaPredicted RBP0.71□□□□□ -2.3
RNU1-78P-201ENST00000391248 COX6CP09669 75 aa0.71□□□□□ -2.3
RNU1-78P-201ENST00000391248 KRTAP12-2P59991 146 aa0.71□□□□□ -2.3
RNU1-78P-201ENST00000391248 ELOF1P60002 83 aaKnown RBP0.71□□□□□ -2.3
RNU1-78P-201ENST00000391248 PSMG4Q5JS54 123 aa0.71□□□□□ -2.3
RNU1-78P-201ENST00000391248 XAF1Q6GPH4 301 aa0.71□□□□□ -2.3
RNU1-78P-201ENST00000391248 FDCSPQ8NFU4 85 aa0.71□□□□□ -2.3
RNU1-78P-201ENST00000391248 ZNF563Q8TA94 476 aa0.71□□□□□ -2.3
RNU1-78P-201ENST00000391248 S100A13Q99584 98 aa0.71□□□□□ -2.3
RNU1-78P-201ENST00000391248 CDC42SE2Q9NRR3 84 aa0.71□□□□□ -2.3
RNU1-78P-201ENST00000391248 HIGD1BQ9P298 99 aa0.71□□□□□ -2.3
RNU1-78P-201ENST00000391248 DNAH8Q96JB1 4490 aa0.71□□□□□ -2.3
RNU1-78P-201ENST00000391248 TNCP24821 2201 aa0.7□□□□□ -2.3
RNU1-78P-201ENST00000391248 PLIN4Q96Q06 1357 aa0.7□□□□□ -2.3
RNU1-78P-201ENST00000391248 PLCE1Q9P212 2302 aa0.7□□□□□ -2.3
RNU1-78P-201ENST00000391248 A0A087WVE0 104 aa0.7□□□□□ -2.3
RNU1-78P-201ENST00000391248 TRAV1-2A0A0B4J238 106 aa0.7□□□□□ -2.3
RNU1-78P-201ENST00000391248 F8WEM9 126 aa0.7□□□□□ -2.3
RNU1-78P-201ENST00000391248 EFNA4P52798 201 aa0.7□□□□□ -2.3
RNU1-78P-201ENST00000391248 SPAG11BQ08648 103 aa0.7□□□□□ -2.3
RNU1-78P-201ENST00000391248 ETDBQ3ZM63 59 aa0.7□□□□□ -2.3
RNU1-78P-201ENST00000391248 C6orf52Q5T4I8 152 aa0.7□□□□□ -2.3
RNU1-78P-201ENST00000391248 FAM74A4Q5TZK3 123 aa0.7□□□□□ -2.3
RNU1-78P-201ENST00000391248 GDF5OSQ5U4N7 250 aa0.7□□□□□ -2.3
RNU1-78P-201ENST00000391248 SPAG11AQ6PDA7 123 aa0.7□□□□□ -2.3
RNU1-78P-201ENST00000391248 PP632Q6XCG6 107 aa0.7□□□□□ -2.3
RNU1-78P-201ENST00000391248 LINC00208Q96KT6 92 aa0.7□□□□□ -2.3
RNU1-78P-201ENST00000391248 CCL19Q99731 98 aa0.7□□□□□ -2.3
RNU1-78P-201ENST00000391248 PRR15LQ9BU68 103 aa0.7□□□□□ -2.3
RNU1-78P-201ENST00000391248 ARL2-SNX15V9GYD0 113 aa0.7□□□□□ -2.3
RNU1-78P-201ENST00000391248 ROS1P08922 2347 aa0.7□□□□□ -2.3
RNU1-78P-201ENST00000391248 TRBV25-1A0A075B6N4 114 aa0.69□□□□□ -2.3
RNU1-78P-201ENST00000391248 CTXND1A0A1B0GTU2 59 aa0.69□□□□□ -2.3
RNU1-78P-201ENST00000391248 C10orf142B7Z368 130 aa0.69□□□□□ -2.3
RNU1-78P-201ENST00000391248 M0R2N4 97 aa0.69□□□□□ -2.3
RNU1-78P-201ENST00000391248 LY6G6CO95867 125 aa0.69□□□□□ -2.3
RNU1-78P-201ENST00000391248 ACYP2P14621 99 aa0.69□□□□□ -2.3
RNU1-78P-201ENST00000391248 CD52P31358 61 aa0.69□□□□□ -2.3
RNU1-78P-201ENST00000391248 SPINT3P49223 89 aa0.69□□□□□ -2.3
RNU1-78P-201ENST00000391248 ZNF137PP52743 207 aa0.69□□□□□ -2.3
RNU1-78P-201ENST00000391248 FXYD4P59646 89 aa0.69□□□□□ -2.3
RNU1-78P-201ENST00000391248 DEFA5Q01523 94 aa0.69□□□□□ -2.3
RNU1-78P-201ENST00000391248 KRTAP1-1Q07627 177 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms