RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 ZNF706Q9Y5V0 76 aaPredicted RBP6.6□□□□□ -1.35
IGHV4-28-201ENST00000390612 ERC2-IT1O76042 136 aa6.59□□□□□ -1.35
IGHV4-28-201ENST00000390612 S100A12P80511 92 aa6.59□□□□□ -1.35
IGHV4-28-201ENST00000390612 Q6ZRX8 168 aa6.59□□□□□ -1.35
IGHV4-28-201ENST00000390612 SPANXCQ9NY87 97 aa6.59□□□□□ -1.35
IGHV4-28-201ENST00000390612 C20orf202A1L168 122 aa6.58□□□□□ -1.36
IGHV4-28-201ENST00000390612 PRR4Q16378 134 aa6.58□□□□□ -1.36
IGHV4-28-201ENST00000390612 S100A7L2Q5SY68 101 aa6.58□□□□□ -1.36
IGHV4-28-201ENST00000390612 HIST3H2BBQ8N257 126 aa6.58□□□□□ -1.36
IGHV4-28-201ENST00000390612 TRAV23DV6A0A075B6W5 121 aa6.57□□□□□ -1.36
IGHV4-28-201ENST00000390612 AKR1D1P51857 326 aa6.57□□□□□ -1.36
IGHV4-28-201ENST00000390612 SPANXDQ9BXN6 97 aa6.57□□□□□ -1.36
IGHV4-28-201ENST00000390612 PPDPFQ9H3Y8 114 aa6.57□□□□□ -1.36
IGHV4-28-201ENST00000390612 ZNF73O43830 326 aaPredicted RBP6.56□□□□□ -1.36
IGHV4-28-201ENST00000390612 ATOH7Q8N100 152 aa6.56□□□□□ -1.36
IGHV4-28-201ENST00000390612 HIST1H2BLQ99880 126 aa6.56□□□□□ -1.36
IGHV4-28-201ENST00000390612 SPAG11AQ6PDA7 123 aa6.55□□□□□ -1.36
IGHV4-28-201ENST00000390612 PCP2Q8IVA1 136 aa6.55□□□□□ -1.36
IGHV4-28-201ENST00000390612 LINC00518Q8N0U6 118 aa6.55□□□□□ -1.36
IGHV4-28-201ENST00000390612 S100A6P06703 90 aa6.54□□□□□ -1.36
IGHV4-28-201ENST00000390612 SNRPEP62304 92 aaKnown RBP6.54□□□□□ -1.36
IGHV4-28-201ENST00000390612 CBY1Q9Y3M2 126 aa6.54□□□□□ -1.36
IGHV4-28-201ENST00000390612 C5orf52A6NGY3 159 aa6.53□□□□□ -1.36
IGHV4-28-201ENST00000390612 IFITM1P13164 125 aa6.53□□□□□ -1.36
IGHV4-28-201ENST00000390612 JOSD1Q15040 202 aaPredicted RBP6.53□□□□□ -1.36
IGHV4-28-201ENST00000390612 GAGE2AQ6NT46 116 aa6.53□□□□□ -1.36
IGHV4-28-201ENST00000390612 Q6ZVH6 145 aa6.53□□□□□ -1.36
IGHV4-28-201ENST00000390612 SCGB1D4Q6XE38 83 aa6.52□□□□□ -1.37
IGHV4-28-201ENST00000390612 SSBP3-AS1Q7Z2R9 100 aa6.51□□□□□ -1.37
IGHV4-28-201ENST00000390612 Q8NBF4 154 aa6.51□□□□□ -1.37
IGHV4-28-201ENST00000390612 OR13C6PQ8NH95 151 aa6.51□□□□□ -1.37
IGHV4-28-201ENST00000390612 RETNLBQ9BQ08 111 aa6.51□□□□□ -1.37
IGHV4-28-201ENST00000390612 S100A2P29034 98 aa6.5□□□□□ -1.37
IGHV4-28-201ENST00000390612 MUC2Q02817 5179 aa6.5□□□□□ -1.37
IGHV4-28-201ENST00000390612 MUC17Q685J3 4493 aa6.49□□□□□ -1.37
IGHV4-28-201ENST00000390612 SMIM6P0DI80 62 aa6.49□□□□□ -1.37
IGHV4-28-201ENST00000390612 SPRR1BP22528 89 aa6.49□□□□□ -1.37
IGHV4-28-201ENST00000390612 HINT1P49773 126 aaPredicted RBP6.49□□□□□ -1.37
IGHV4-28-201ENST00000390612 MUSTN1Q8IVN3 82 aa6.49□□□□□ -1.37
IGHV4-28-201ENST00000390612 ST20-AS1Q8NBB2 130 aa6.49□□□□□ -1.37
IGHV4-28-201ENST00000390612 COPS9Q8WXC6 57 aa6.49□□□□□ -1.37
IGHV4-28-201ENST00000390612 TRBV7-6A0A0J9YX20 115 aa6.48□□□□□ -1.37
IGHV4-28-201ENST00000390612 SPINK1P00995 79 aa6.48□□□□□ -1.37
IGHV4-28-201ENST00000390612 ELOF1P60002 83 aaKnown RBP6.48□□□□□ -1.37
IGHV4-28-201ENST00000390612 DHRS4-AS1Q9P1J3 65 aa6.48□□□□□ -1.37
IGHV4-28-201ENST00000390612 MOBPQ13875 183 aa6.47□□□□□ -1.37
IGHV4-28-201ENST00000390612 TPRXLQ17RH7 258 aa6.47□□□□□ -1.37
IGHV4-28-201ENST00000390612 C6orf99Q4VX62 202 aa6.47□□□□□ -1.37
IGHV4-28-201ENST00000390612 C4orf48Q5BLP8 95 aa6.47□□□□□ -1.37
IGHV4-28-201ENST00000390612 C12orf57Q99622 126 aa6.47□□□□□ -1.37
IGHV4-28-201ENST00000390612 IGLV7-46A0A075B6I9 117 aa6.46□□□□□ -1.38
IGHV4-28-201ENST00000390612 IGLV9-49A0A0B4J1Y8 123 aa6.46□□□□□ -1.38
IGHV4-28-201ENST00000390612 COX7BP24311 80 aa6.46□□□□□ -1.38
IGHV4-28-201ENST00000390612 RPS29P62273 56 aaKnown RBP6.46□□□□□ -1.38
IGHV4-28-201ENST00000390612 FP248Q71RG6 208 aaPredicted RBP6.45□□□□□ -1.38
IGHV4-28-201ENST00000390612 TRAV13-2A0A0B4J235 113 aa6.43□□□□□ -1.38
IGHV4-28-201ENST00000390612 A0A1B0GWB2 263 aa6.43□□□□□ -1.38
IGHV4-28-201ENST00000390612 HSBP1L1C9JCN9 74 aa6.43□□□□□ -1.38
IGHV4-28-201ENST00000390612 Q8N377 158 aa6.43□□□□□ -1.38
IGHV4-28-201ENST00000390612 A6NDN8 102 aa6.42□□□□□ -1.38
IGHV4-28-201ENST00000390612 LINC01547P58512 204 aaPredicted RBP6.42□□□□□ -1.38
IGHV4-28-201ENST00000390612 SMIM11BQ8TCY0 68 aa6.42□□□□□ -1.38
IGHV4-28-201ENST00000390612 SCGB1D1O95968 90 aa6.41□□□□□ -1.38
IGHV4-28-201ENST00000390612 IGLV5-48A0A075B6I7 105 aa6.4□□□□□ -1.38
IGHV4-28-201ENST00000390612 A4D1N5 150 aa6.4□□□□□ -1.38
IGHV4-28-201ENST00000390612 DLEU1O43261 78 aa6.4□□□□□ -1.38
IGHV4-28-201ENST00000390612 COX8AP10176 69 aa6.4□□□□□ -1.38
IGHV4-28-201ENST00000390612 KRTAP13-3Q3SY46 172 aa6.4□□□□□ -1.38
IGHV4-28-201ENST00000390612 C9orf153Q5TBE3 101 aa6.4□□□□□ -1.38
IGHV4-28-201ENST00000390612 SLC25A34Q6PIV7 304 aa6.4□□□□□ -1.38
IGHV4-28-201ENST00000390612 SMIM29Q86T20 159 aa6.4□□□□□ -1.38
IGHV4-28-201ENST00000390612 TEX49A0A1B0GTD5 131 aa6.39□□□□□ -1.39
IGHV4-28-201ENST00000390612 SLC25A20O43772 301 aa6.39□□□□□ -1.39
IGHV4-28-201ENST00000390612 LAMTOR3Q9UHA4 124 aa6.39□□□□□ -1.39
IGHV4-28-201ENST00000390612 PCP4L1A6NKN8 68 aa6.38□□□□□ -1.39
IGHV4-28-201ENST00000390612 TAL2Q16559 108 aa6.38□□□□□ -1.39
IGHV4-28-201ENST00000390612 CDIP1Q9H305 208 aa6.38□□□□□ -1.39
IGHV4-28-201ENST00000390612 DEFB105AQ8NG35 78 aa6.36□□□□□ -1.39
IGHV4-28-201ENST00000390612 CD164Q04900 197 aa6.35□□□□□ -1.39
IGHV4-28-201ENST00000390612 Q1RN00 199 aa6.35□□□□□ -1.39
IGHV4-28-201ENST00000390612 LINC00575Q6W349 94 aa6.35□□□□□ -1.39
IGHV4-28-201ENST00000390612 HIGD1BQ9P298 99 aa6.35□□□□□ -1.39
IGHV4-28-201ENST00000390612 PYY3Q5JQD4 70 aa6.34□□□□□ -1.39
IGHV4-28-201ENST00000390612 C14orf144Q96I85 54 aa6.34□□□□□ -1.39
IGHV4-28-201ENST00000390612 HIST1H4GQ99525 98 aa6.34□□□□□ -1.39
IGHV4-28-201ENST00000390612 NHP2Q9NX24 153 aaKnown RBP6.34□□□□□ -1.39
IGHV4-28-201ENST00000390612 FAT4Q6V0I7 4981 aa6.33□□□□□ -1.4
IGHV4-28-201ENST00000390612 VAMP3Q15836 100 aa6.33□□□□□ -1.4
IGHV4-28-201ENST00000390612 PRO1933Q9H354 126 aa6.33□□□□□ -1.4
IGHV4-28-201ENST00000390612 PAM16Q9Y3D7 125 aa6.33□□□□□ -1.4
IGHV4-28-201ENST00000390612 SPATA45Q537H7 98 aa6.32□□□□□ -1.4
IGHV4-28-201ENST00000390612 Q5XG85 94 aa6.32□□□□□ -1.4
IGHV4-28-201ENST00000390612 C2orf91Q6ZV80 131 aa6.32□□□□□ -1.4
IGHV4-28-201ENST00000390612 CFC1BP0CG36 223 aa6.31□□□□□ -1.4
IGHV4-28-201ENST00000390612 CFC1P0CG37 223 aa6.31□□□□□ -1.4
IGHV4-28-201ENST00000390612 VAMP8Q9BV40 100 aa6.31□□□□□ -1.4
IGHV4-28-201ENST00000390612 hADV29S1A0JD25 119 aa6.3□□□□□ -1.4
IGHV4-28-201ENST00000390612 ASB16-AS1Q495Z4 193 aa6.3□□□□□ -1.4
IGHV4-28-201ENST00000390612 HRCT1Q6UXD1 115 aa6.3□□□□□ -1.4
IGHV4-28-201ENST00000390612 LIMD2Q9BT23 127 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms