RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 ZFHX4Q86UP3 3567 aa9.76□□□□□ -0.85
PSME4-201ENST00000389993 EPM2AB3EWF7 344 aa9.75□□□□□ -0.85
PSME4-201ENST00000389993 LAMA5O15230 3695 aa9.74□□□□□ -0.85
PSME4-201ENST00000389993 SMIM29Q86T20 159 aa9.73□□□□□ -0.85
PSME4-201ENST00000389993 PRO0461Q9UI25 63 aa9.73□□□□□ -0.85
PSME4-201ENST00000389993 FAM240AA0A1B0GVK7 77 aa9.73□□□□□ -0.85
PSME4-201ENST00000389993 HCG22E2RYF7 251 aa9.72□□□□□ -0.85
PSME4-201ENST00000389993 CHD6Q8TD26 2715 aa9.72□□□□□ -0.85
PSME4-201ENST00000389993 SVIPQ8NHG7 77 aa9.72□□□□□ -0.85
PSME4-201ENST00000389993 TEP1Q99973 2627 aaKnown RBP9.71□□□□□ -0.85
PSME4-201ENST00000389993 ELOF1P60002 83 aaKnown RBP9.71□□□□□ -0.85
PSME4-201ENST00000389993 H3BNG1 76 aa9.7□□□□□ -0.86
PSME4-201ENST00000389993 ZNF575Q86XF7 245 aa9.7□□□□□ -0.86
PSME4-201ENST00000389993 MAST4O15021 2626 aa9.69□□□□□ -0.86
PSME4-201ENST00000389993 H0Y9P7 68 aa9.69□□□□□ -0.86
PSME4-201ENST00000389993 LINC00476Q8WZB0 136 aa9.69□□□□□ -0.86
PSME4-201ENST00000389993 ANAPC11Q9NYG5 84 aa9.69□□□□□ -0.86
PSME4-201ENST00000389993 TRAV7A0A075B6U4 112 aa9.69□□□□□ -0.86
PSME4-201ENST00000389993 C16orf90A8MZG2 172 aa9.69□□□□□ -0.86
PSME4-201ENST00000389993 C15orf56Q8N910 161 aa9.68□□□□□ -0.86
PSME4-201ENST00000389993 DCHS1Q96JQ0 3298 aa9.67□□□□□ -0.86
PSME4-201ENST00000389993 Q6ZRX8 168 aa9.67□□□□□ -0.86
PSME4-201ENST00000389993 ZZEF1O43149 2961 aa9.67□□□□□ -0.86
PSME4-201ENST00000389993 F8WDY8 70 aa9.67□□□□□ -0.86
PSME4-201ENST00000389993 GVQW2A0A096LPI5 108 aaPredicted RBP9.66□□□□□ -0.86
PSME4-201ENST00000389993 IGKV2D-30A0A075B6S6 120 aa9.66□□□□□ -0.86
PSME4-201ENST00000389993 SMR3BP02814 79 aaPredicted RBP9.66□□□□□ -0.86
PSME4-201ENST00000389993 IGKV2-30P06310 120 aa9.66□□□□□ -0.86
PSME4-201ENST00000389993 VPREB1P12018 145 aa9.66□□□□□ -0.86
PSME4-201ENST00000389993 MUC3AQ02505 3323 aa9.66□□□□□ -0.86
PSME4-201ENST00000389993 TACC2O95359 2948 aa9.65□□□□□ -0.86
PSME4-201ENST00000389993 RELNP78509 3460 aa9.65□□□□□ -0.86
PSME4-201ENST00000389993 TEX15Q9BXT5 2789 aa9.64□□□□□ -0.87
PSME4-201ENST00000389993 PSPHP1O15172 72 aa9.63□□□□□ -0.87
PSME4-201ENST00000389993 Q6ZQT0 140 aa9.63□□□□□ -0.87
PSME4-201ENST00000389993 C9orf129Q5T035 196 aaKnown RBP9.63□□□□□ -0.87
PSME4-201ENST00000389993 TRBV7-6A0A0J9YX20 115 aa9.63□□□□□ -0.87
PSME4-201ENST00000389993 IGSF10Q6WRI0 2623 aa9.63□□□□□ -0.87
PSME4-201ENST00000389993 A6NED7 52 aa9.62□□□□□ -0.87
PSME4-201ENST00000389993 WWC2-AS2Q96NR7 200 aa9.6□□□□□ -0.87
PSME4-201ENST00000389993 TRBV7-7A0A0K0K1E9 115 aa9.59□□□□□ -0.87
PSME4-201ENST00000389993 TMEM254Q8TBM7 123 aa9.59□□□□□ -0.87
PSME4-201ENST00000389993 IGLV6-57P01721 117 aa9.59□□□□□ -0.87
PSME4-201ENST00000389993 CRYGAP11844 174 aa9.58□□□□□ -0.88
PSME4-201ENST00000389993 PRR15LQ9BU68 103 aa9.58□□□□□ -0.88
PSME4-201ENST00000389993 NDUFC1O43677 76 aa9.58□□□□□ -0.88
PSME4-201ENST00000389993 C1orf64Q8NEQ6 169 aa9.56□□□□□ -0.88
PSME4-201ENST00000389993 TYMSOSQ8TAI1 123 aa9.56□□□□□ -0.88
PSME4-201ENST00000389993 IGLV1-50A0A075B6I6 118 aa9.55□□□□□ -0.88
PSME4-201ENST00000389993 TM2D3Q9BRN9 247 aa9.55□□□□□ -0.88
PSME4-201ENST00000389993 PRR34Q9NV39 138 aa9.54□□□□□ -0.88
PSME4-201ENST00000389993 BCE1O60756 84 aa9.53□□□□□ -0.88
PSME4-201ENST00000389993 hDV103S1A0JD37 113 aa9.53□□□□□ -0.88
PSME4-201ENST00000389993 CXCL6P80162 114 aa9.53□□□□□ -0.88
PSME4-201ENST00000389993 LINC00612Q8N6U2 182 aa9.52□□□□□ -0.89
PSME4-201ENST00000389993 SERP1Q9Y6X1 66 aa9.52□□□□□ -0.89
PSME4-201ENST00000389993 NBEAL2Q6ZNJ1 2754 aa9.51□□□□□ -0.89
PSME4-201ENST00000389993 K7EQZ3 153 aa9.5□□□□□ -0.89
PSME4-201ENST00000389993 Q8NBF4 154 aa9.5□□□□□ -0.89
PSME4-201ENST00000389993 ERC2-IT1O76042 136 aa9.5□□□□□ -0.89
PSME4-201ENST00000389993 PLA2G1BP04054 148 aaKnown RBP9.5□□□□□ -0.89
PSME4-201ENST00000389993 LIMD2Q9BT23 127 aa9.49□□□□□ -0.89
PSME4-201ENST00000389993 A0A087WTM6 91 aa9.48□□□□□ -0.89
PSME4-201ENST00000389993 C7orf65Q6ZTY9 151 aa9.47□□□□□ -0.89
PSME4-201ENST00000389993 APLNQ9ULZ1 77 aa9.47□□□□□ -0.89
PSME4-201ENST00000389993 FAM229AH3BQW9 127 aa9.47□□□□□ -0.89
PSME4-201ENST00000389993 GCN1Q92616 2671 aaKnown RBP9.47□□□□□ -0.89
PSME4-201ENST00000389993 Q96NJ1 140 aa9.47□□□□□ -0.89
PSME4-201ENST00000389993 ATP5EP56381 51 aaPredicted RBP9.46□□□□□ -0.89
PSME4-201ENST00000389993 Q8N377 158 aa9.46□□□□□ -0.9
PSME4-201ENST00000389993 C9orf92A6NGG3 77 aa9.45□□□□□ -0.9
PSME4-201ENST00000389993 IGFL1Q6UW32 110 aa9.45□□□□□ -0.9
PSME4-201ENST00000389993 LINC00528Q8N1L1 170 aa9.45□□□□□ -0.9
PSME4-201ENST00000389993 LOC110117498A0A087WWA1 95 aa9.45□□□□□ -0.9
PSME4-201ENST00000389993 FAM104AQ969W3 186 aa9.45□□□□□ -0.9
PSME4-201ENST00000389993 KCNQ1DNQ9H478 68 aa9.44□□□□□ -0.9
PSME4-201ENST00000389993 CRYBG3Q68DQ2 2970 aa9.44□□□□□ -0.9
PSME4-201ENST00000389993 LINC00313P59037 77 aa9.43□□□□□ -0.9
PSME4-201ENST00000389993 TRBV7-4A0A0J9YYF1 115 aa9.43□□□□□ -0.9
PSME4-201ENST00000389993 IGLV8-61A0A075B6I0 122 aa9.43□□□□□ -0.9
PSME4-201ENST00000389993 DSCR10P59022 87 aa9.42□□□□□ -0.9
PSME4-201ENST00000389993 SMIM26A0A096LP01 95 aa9.41□□□□□ -0.9
PSME4-201ENST00000389993 ASH1LQ9NR48 2969 aaKnown RBP9.41□□□□□ -0.9
PSME4-201ENST00000389993 CSMD1Q96PZ7 3565 aa9.41□□□□□ -0.9
PSME4-201ENST00000389993 FLNCQ14315 2725 aa9.4□□□□□ -0.9
PSME4-201ENST00000389993 ITPR1Q14643 2758 aa9.4□□□□□ -0.9
PSME4-201ENST00000389993 UTP20O75691 2785 aaKnown RBP9.39□□□□□ -0.91
PSME4-201ENST00000389993 SPAG11AQ6PDA7 123 aa9.39□□□□□ -0.91
PSME4-201ENST00000389993 PSORS1C2Q9UIG4 136 aa9.38□□□□□ -0.91
PSME4-201ENST00000389993 TNP2Q05952 138 aa9.38□□□□□ -0.91
PSME4-201ENST00000389993 V9GYY9 64 aa9.37□□□□□ -0.91
PSME4-201ENST00000389993 SMG1Q96Q15 3661 aaKnown RBP9.36□□□□□ -0.91
PSME4-201ENST00000389993 SETXQ7Z333 2677 aaKnown RBP9.36□□□□□ -0.91
PSME4-201ENST00000389993 C4orf26Q17RF5 130 aa9.35□□□□□ -0.91
PSME4-201ENST00000389993 C9orf163Q8N9P6 203 aa9.35□□□□□ -0.91
PSME4-201ENST00000389993 K7ERS5 55 aa9.35□□□□□ -0.91
PSME4-201ENST00000389993 OBSCN-AS1Q96MR7 158 aa9.34□□□□□ -0.91
PSME4-201ENST00000389993 Q8NDZ9 215 aa9.33□□□□□ -0.92
PSME4-201ENST00000389993 UBR5O95071 2799 aaPredicted RBP9.32□□□□□ -0.92
PSME4-201ENST00000389993 COL6A5A8TX70 2615 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms