RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 PSMG4Q5JS54 123 aa-1.22□□□□□ -2.6
SNORD28-201ENST00000384706 MEIG1Q5JSS6 88 aa-1.22□□□□□ -2.6
SNORD28-201ENST00000384706 RGPD8O14715 1765 aaPredicted RBP-1.22□□□□□ -2.6
SNORD28-201ENST00000384706 RGPD5Q99666 1765 aa-1.22□□□□□ -2.6
SNORD28-201ENST00000384706 SAMD9Q5K651 1589 aa-1.22□□□□□ -2.61
SNORD28-201ENST00000384706 UBR3Q6ZT12 1888 aa-1.22□□□□□ -2.61
SNORD28-201ENST00000384706 SCAPERQ9BY12 1400 aa-1.23□□□□□ -2.61
SNORD28-201ENST00000384706 TRRAPQ9Y4A5 3859 aa-1.23□□□□□ -2.61
SNORD28-201ENST00000384706 NAP1L6A6NFF2 107 aa-1.23□□□□□ -2.61
SNORD28-201ENST00000384706 CRYM-AS1A6NIL9 109 aa-1.23□□□□□ -2.61
SNORD28-201ENST00000384706 ASIPP42127 132 aa-1.23□□□□□ -2.61
SNORD28-201ENST00000384706 ARPC4P59998 168 aa-1.23□□□□□ -2.61
SNORD28-201ENST00000384706 DEFB106AQ8N104 65 aa-1.23□□□□□ -2.61
SNORD28-201ENST00000384706 PLXNC1O60486 1568 aa-1.23□□□□□ -2.61
SNORD28-201ENST00000384706 CUL7Q14999 1698 aa-1.23□□□□□ -2.61
SNORD28-201ENST00000384706 TOPAZ1Q8N9V7 1692 aa-1.23□□□□□ -2.61
SNORD28-201ENST00000384706 CDC42BPAQ5VT25 1732 aa-1.23□□□□□ -2.61
SNORD28-201ENST00000384706 TIAM2Q8IVF5 1701 aa-1.23□□□□□ -2.61
SNORD28-201ENST00000384706 RGPD3A6NKT7 1758 aaPredicted RBP-1.24□□□□□ -2.61
SNORD28-201ENST00000384706 RGPD4Q7Z3J3 1758 aa-1.24□□□□□ -2.61
SNORD28-201ENST00000384706 MAGI2Q86UL8 1455 aa-1.24□□□□□ -2.61
SNORD28-201ENST00000384706 DMXL2Q8TDJ6 3036 aa-1.24□□□□□ -2.61
SNORD28-201ENST00000384706 USP32Q8NFA0 1604 aa-1.24□□□□□ -2.61
SNORD28-201ENST00000384706 OOSP1A8MZH6 123 aa-1.24□□□□□ -2.61
SNORD28-201ENST00000384706 FAM25AB3EWG3 89 aa-1.24□□□□□ -2.61
SNORD28-201ENST00000384706 FAM25CB3EWG5 89 aa-1.24□□□□□ -2.61
SNORD28-201ENST00000384706 FAM25GB3EWG6 89 aa-1.24□□□□□ -2.61
SNORD28-201ENST00000384706 TMEM262E9PQX1 116 aa-1.24□□□□□ -2.61
SNORD28-201ENST00000384706 ATP5EP56381 51 aaPredicted RBP-1.24□□□□□ -2.61
SNORD28-201ENST00000384706 LINC00158P58513 81 aa-1.24□□□□□ -2.61
SNORD28-201ENST00000384706 RPL38P63173 70 aaKnown RBP-1.24□□□□□ -2.61
SNORD28-201ENST00000384706 MT1MQ8N339 61 aa-1.24□□□□□ -2.61
SNORD28-201ENST00000384706 ANP32BQ92688 251 aaKnown RBP-1.24□□□□□ -2.61
SNORD28-201ENST00000384706 PRO3102Q9H379 93 aa-1.24□□□□□ -2.61
SNORD28-201ENST00000384706 LRRC9Q6ZRR7 1453 aa-1.24□□□□□ -2.61
SNORD28-201ENST00000384706 FAM135AQ9P2D6 1515 aa-1.25□□□□□ -2.61
SNORD28-201ENST00000384706 MT2AP02795 61 aa-1.25□□□□□ -2.61
SNORD28-201ENST00000384706 C3orf79P0CE67 100 aa-1.25□□□□□ -2.61
SNORD28-201ENST00000384706 COX7BP24311 80 aa-1.25□□□□□ -2.61
SNORD28-201ENST00000384706 C1orf54Q8WWF1 131 aa-1.25□□□□□ -2.61
SNORD28-201ENST00000384706 KTN1Q86UP2 1357 aaKnown RBP-1.25□□□□□ -2.61
SNORD28-201ENST00000384706 CDC42BPGQ6DT37 1551 aa-1.25□□□□□ -2.61
SNORD28-201ENST00000384706 PKD1L3Q7Z443 1732 aa-1.26□□□□□ -2.61
SNORD28-201ENST00000384706 FOCADQ5VW36 1801 aa-1.26□□□□□ -2.61
SNORD28-201ENST00000384706 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.26□□□□□ -2.61
SNORD28-201ENST00000384706 FAM24AA6NFZ4 105 aa-1.26□□□□□ -2.61
SNORD28-201ENST00000384706 MT1BP07438 61 aa-1.26□□□□□ -2.61
SNORD28-201ENST00000384706 IGLC2P0DOY2 106 aa-1.26□□□□□ -2.61
SNORD28-201ENST00000384706 IGLC3P0DOY3 106 aa-1.26□□□□□ -2.61
SNORD28-201ENST00000384706 CGREF1Q99674 301 aa-1.26□□□□□ -2.61
SNORD28-201ENST00000384706 DPH3P1Q9H4G8 78 aa-1.26□□□□□ -2.61
SNORD28-201ENST00000384706 ABCC10Q5T3U5 1492 aa-1.26□□□□□ -2.61
SNORD28-201ENST00000384706 SPENQ96T58 3664 aaKnown RBP-1.26□□□□□ -2.61
SNORD28-201ENST00000384706 ADGRG4Q8IZF6 3080 aa-1.27□□□□□ -2.61
SNORD28-201ENST00000384706 TMEM218A2RU14 115 aa-1.27□□□□□ -2.61
SNORD28-201ENST00000384706 TNP1P09430 55 aa-1.27□□□□□ -2.61
SNORD28-201ENST00000384706 PMCHL1Q16048 86 aa-1.27□□□□□ -2.61
SNORD28-201ENST00000384706 KRTAP8-1Q8IUC2 63 aa-1.27□□□□□ -2.61
SNORD28-201ENST00000384706 SERP2Q8N6R1 65 aa-1.27□□□□□ -2.61
SNORD28-201ENST00000384706 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.27□□□□□ -2.61
SNORD28-201ENST00000384706 NAIPQ13075 1403 aa-1.27□□□□□ -2.61
SNORD28-201ENST00000384706 MAGI3Q5TCQ9 1506 aa-1.27□□□□□ -2.61
SNORD28-201ENST00000384706 ANKRD36CQ5JPF3 1778 aa-1.27□□□□□ -2.61
SNORD28-201ENST00000384706 GNG7O60262 68 aa-1.28□□□□□ -2.61
SNORD28-201ENST00000384706 KRTAP20-1Q3LI63 56 aa-1.28□□□□□ -2.61
SNORD28-201ENST00000384706 CACFD1Q9UGQ2 172 aa-1.28□□□□□ -2.61
SNORD28-201ENST00000384706 DNAH17Q9UFH2 4485 aa-1.28□□□□□ -2.62
SNORD28-201ENST00000384706 MGAQ8IWI9 3026 aa-1.29□□□□□ -2.62
SNORD28-201ENST00000384706 CHD1O14646 1710 aa-1.29□□□□□ -2.62
SNORD28-201ENST00000384706 CRYBG1Q9Y4K1 1723 aa-1.29□□□□□ -2.62
SNORD28-201ENST00000384706 WIZO95785 1651 aa-1.29□□□□□ -2.62
SNORD28-201ENST00000384706 DEPDC5O75140 1603 aa-1.29□□□□□ -2.62
SNORD28-201ENST00000384706 LRRC7Q96NW7 1537 aa-1.29□□□□□ -2.62
SNORD28-201ENST00000384706 TRBV25-1A0A075B6N4 114 aa-1.29□□□□□ -2.62
SNORD28-201ENST00000384706 MMP24-AS1A0A0U1RRL7 71 aa-1.29□□□□□ -2.62
SNORD28-201ENST00000384706 DEFB130BP0DP73 79 aa-1.29□□□□□ -2.62
SNORD28-201ENST00000384706 DEFB130AP0DP74 79 aa-1.29□□□□□ -2.62
SNORD28-201ENST00000384706 IAPPP10997 89 aa-1.29□□□□□ -2.62
SNORD28-201ENST00000384706 KRTDAPP60985 99 aa-1.29□□□□□ -2.62
SNORD28-201ENST00000384706 LINC00470Q9BZP3 86 aa-1.29□□□□□ -2.62
SNORD28-201ENST00000384706 ZNF831Q5JPB2 1677 aa-1.29□□□□□ -2.62
SNORD28-201ENST00000384706 ARHGAP5Q13017 1502 aa-1.3□□□□□ -2.62
SNORD28-201ENST00000384706 ATMQ13315 3056 aa-1.3□□□□□ -2.62
SNORD28-201ENST00000384706 SELENOWP63302 87 aa-1.3□□□□□ -2.62
SNORD28-201ENST00000384706 PYDC1Q8WXC3 89 aa-1.3□□□□□ -2.62
SNORD28-201ENST00000384706 ITPR2Q14571 2701 aa-1.3□□□□□ -2.62
SNORD28-201ENST00000384706 NESP48681 1621 aa-1.3□□□□□ -2.62
SNORD28-201ENST00000384706 CC2D2AQ9P2K1 1620 aa-1.3□□□□□ -2.62
SNORD28-201ENST00000384706 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.3□□□□□ -2.62
SNORD28-201ENST00000384706 ABCC2Q92887 1545 aa-1.3□□□□□ -2.62
SNORD28-201ENST00000384706 ATP7BP35670 1465 aa-1.31□□□□□ -2.62
SNORD28-201ENST00000384706 CSMD2Q7Z408 3487 aa-1.31□□□□□ -2.62
SNORD28-201ENST00000384706 hADV29S1A0JD25 119 aa-1.31□□□□□ -2.62
SNORD28-201ENST00000384706 D6R8Y8 96 aa-1.31□□□□□ -2.62
SNORD28-201ENST00000384706 UQCRHP07919 91 aa-1.31□□□□□ -2.62
SNORD28-201ENST00000384706 IFI6P09912 130 aa-1.31□□□□□ -2.62
SNORD28-201ENST00000384706 AKAIN1P0CW23 69 aa-1.31□□□□□ -2.62
SNORD28-201ENST00000384706 MUSTN1Q8IVN3 82 aa-1.31□□□□□ -2.62
SNORD28-201ENST00000384706 WFDC9Q8NEX5 89 aa-1.31□□□□□ -2.62
SNORD28-201ENST00000384706 MLH3Q9UHC1 1453 aa-1.31□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms