RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 Q8N3U1 123 aa3.99□□□□□ -1.77
RFC1-202ENST00000381897 C18orf65Q6ZTR6 163 aa3.98□□□□□ -1.77
RFC1-202ENST00000381897 FAM104AQ969W3 186 aa3.98□□□□□ -1.77
RFC1-202ENST00000381897 TLN2Q9Y4G6 2542 aa3.98□□□□□ -1.77
RFC1-202ENST00000381897 SMIM29Q86T20 159 aa3.98□□□□□ -1.77
RFC1-202ENST00000381897 HIVEP3Q5T1R4 2406 aa3.98□□□□□ -1.77
RFC1-202ENST00000381897 Q6ZSN1 163 aa3.98□□□□□ -1.77
RFC1-202ENST00000381897 Q6ZTI0 123 aa3.98□□□□□ -1.77
RFC1-202ENST00000381897 NACAE9PAV3 2078 aa3.97□□□□□ -1.77
RFC1-202ENST00000381897 LINC00959A0A1B0GUT2 108 aa3.97□□□□□ -1.77
RFC1-202ENST00000381897 H7BZZ5 65 aa3.97□□□□□ -1.77
RFC1-202ENST00000381897 LINC00575Q6W349 94 aa3.97□□□□□ -1.77
RFC1-202ENST00000381897 Q6ZQY7 126 aa3.97□□□□□ -1.77
RFC1-202ENST00000381897 COL27A1Q8IZC6 1860 aaPredicted RBP3.97□□□□□ -1.77
RFC1-202ENST00000381897 ANGP03950 147 aaKnown RBP3.97□□□□□ -1.77
RFC1-202ENST00000381897 SORL1Q92673 2214 aa3.97□□□□□ -1.77
RFC1-202ENST00000381897 USP9YO00507 2555 aaPredicted RBP3.97□□□□□ -1.77
RFC1-202ENST00000381897 DNAJC9-AS1A6NH13 148 aa3.96□□□□□ -1.77
RFC1-202ENST00000381897 Q6ZQT0 140 aa3.96□□□□□ -1.77
RFC1-202ENST00000381897 DEFB130BP0DP73 79 aa3.96□□□□□ -1.78
RFC1-202ENST00000381897 DEFB130AP0DP74 79 aa3.96□□□□□ -1.78
RFC1-202ENST00000381897 FLNBO75369 2602 aaKnown RBP3.96□□□□□ -1.78
RFC1-202ENST00000381897 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.96□□□□□ -1.78
RFC1-202ENST00000381897 LINC00167Q96N53 147 aa3.96□□□□□ -1.78
RFC1-202ENST00000381897 HRNRQ86YZ3 2850 aaPredicted RBP3.96□□□□□ -1.78
RFC1-202ENST00000381897 CLPSL2Q6UWE3 100 aa3.95□□□□□ -1.78
RFC1-202ENST00000381897 LY6G6CO95867 125 aa3.95□□□□□ -1.78
RFC1-202ENST00000381897 FAM229BQ4G0N7 80 aa3.95□□□□□ -1.78
RFC1-202ENST00000381897 C14orf177Q52M58 125 aa3.95□□□□□ -1.78
RFC1-202ENST00000381897 SPART-AS1P0CW21 52 aa3.95□□□□□ -1.78
RFC1-202ENST00000381897 DEFB114Q30KQ6 69 aa3.95□□□□□ -1.78
RFC1-202ENST00000381897 DMAC1Q96GE9 116 aa3.95□□□□□ -1.78
RFC1-202ENST00000381897 WNK1Q9H4A3 2382 aa3.95□□□□□ -1.78
RFC1-202ENST00000381897 Q8N9L7 120 aa3.94□□□□□ -1.78
RFC1-202ENST00000381897 WWC2-AS2Q96NR7 200 aa3.94□□□□□ -1.78
RFC1-202ENST00000381897 DEFB136Q30KP8 78 aa3.94□□□□□ -1.78
RFC1-202ENST00000381897 CIRBP-AS1Q8TBR5 109 aa3.93□□□□□ -1.78
RFC1-202ENST00000381897 USP9XQ93008 2570 aaPredicted RBP3.93□□□□□ -1.78
RFC1-202ENST00000381897 ELOF1P60002 83 aaKnown RBP3.93□□□□□ -1.78
RFC1-202ENST00000381897 C16orf95Q9H693 158 aa3.93□□□□□ -1.78
RFC1-202ENST00000381897 PRO0255Q9UI72 69 aa3.93□□□□□ -1.78
RFC1-202ENST00000381897 A0A1B0GU69 56 aa3.93□□□□□ -1.78
RFC1-202ENST00000381897 A0A1W2PPR1 153 aa3.93□□□□□ -1.78
RFC1-202ENST00000381897 A8MTW9 85 aa3.92□□□□□ -1.78
RFC1-202ENST00000381897 CELSR2Q9HCU4 2923 aa3.92□□□□□ -1.78
RFC1-202ENST00000381897 FLNCQ14315 2725 aa3.92□□□□□ -1.78
RFC1-202ENST00000381897 A0A1B0GUV1 79 aa3.92□□□□□ -1.78
RFC1-202ENST00000381897 C1orf64Q8NEQ6 169 aa3.92□□□□□ -1.78
RFC1-202ENST00000381897 JMJD1CQ15652 2540 aa3.92□□□□□ -1.78
RFC1-202ENST00000381897 EPG5Q9HCE0 2579 aa3.92□□□□□ -1.78
RFC1-202ENST00000381897 MYO9AB2RTY4 2548 aa3.92□□□□□ -1.78
RFC1-202ENST00000381897 RPL37AP61513 92 aaKnown RBP3.92□□□□□ -1.78
RFC1-202ENST00000381897 MUC4Q99102 2169 aa3.91□□□□□ -1.78
RFC1-202ENST00000381897 DOPEY1Q5JWR5 2465 aa3.91□□□□□ -1.78
RFC1-202ENST00000381897 CYSTM1Q9H1C7 97 aa3.91□□□□□ -1.78
RFC1-202ENST00000381897 IGLV10-54A0A075B6I4 117 aa3.91□□□□□ -1.78
RFC1-202ENST00000381897 LINC00476Q8WZB0 136 aa3.91□□□□□ -1.78
RFC1-202ENST00000381897 OXTP01178 125 aa3.9□□□□□ -1.78
RFC1-202ENST00000381897 CRIPTQ9P021 101 aa3.9□□□□□ -1.78
RFC1-202ENST00000381897 TLX1NBP0CAT3 122 aa3.9□□□□□ -1.79
RFC1-202ENST00000381897 ZANQ9Y493 2812 aa3.9□□□□□ -1.79
RFC1-202ENST00000381897 DEFB105AQ8NG35 78 aa3.9□□□□□ -1.79
RFC1-202ENST00000381897 C7orf33Q8WU49 177 aa3.9□□□□□ -1.79
RFC1-202ENST00000381897 KRTAP3-3Q9BYR6 98 aa3.9□□□□□ -1.79
RFC1-202ENST00000381897 KRTAP3-2Q9BYR7 98 aa3.9□□□□□ -1.79
RFC1-202ENST00000381897 ZNF702PQ9H963 129 aa3.9□□□□□ -1.79
RFC1-202ENST00000381897 ETDCA0A1B0GVM5 59 aa3.89□□□□□ -1.79
RFC1-202ENST00000381897 UQCR11O14957 56 aa3.89□□□□□ -1.79
RFC1-202ENST00000381897 C9orf129Q5T035 196 aaKnown RBP3.89□□□□□ -1.79
RFC1-202ENST00000381897 ITPR1Q14643 2758 aa3.89□□□□□ -1.79
RFC1-202ENST00000381897 A0A096LPF7 62 aa3.89□□□□□ -1.79
RFC1-202ENST00000381897 LINC00474Q9P2X8 69 aa3.89□□□□□ -1.79
RFC1-202ENST00000381897 C10orf99Q6UWK7 81 aa3.89□□□□□ -1.79
RFC1-202ENST00000381897 Q6ZTC4 211 aa3.89□□□□□ -1.79
RFC1-202ENST00000381897 C22orf24Q9Y442 160 aa3.89□□□□□ -1.79
RFC1-202ENST00000381897 FLG2Q5D862 2391 aaPredicted RBP3.89□□□□□ -1.79
RFC1-202ENST00000381897 LINC01006Q8NI28 216 aa3.88□□□□□ -1.79
RFC1-202ENST00000381897 LINC00208Q96KT6 92 aa3.88□□□□□ -1.79
RFC1-202ENST00000381897 TRBV7-4A0A0J9YYF1 115 aa3.88□□□□□ -1.79
RFC1-202ENST00000381897 FP248Q71RG6 208 aaPredicted RBP3.88□□□□□ -1.79
RFC1-202ENST00000381897 LOC101927531A0A1B0GV80 90 aa3.87□□□□□ -1.79
RFC1-202ENST00000381897 EPM2AB3EWF7 344 aa3.87□□□□□ -1.79
RFC1-202ENST00000381897 CFAP46Q8IYW2 2715 aa3.86□□□□□ -1.79
RFC1-202ENST00000381897 CYSRT1A8MQ03 144 aa3.86□□□□□ -1.79
RFC1-202ENST00000381897 COA5Q86WW8 74 aa3.86□□□□□ -1.79
RFC1-202ENST00000381897 ACANP16112 2415 aa3.86□□□□□ -1.79
RFC1-202ENST00000381897 ANKRD17O75179 2603 aaKnown RBP3.86□□□□□ -1.79
RFC1-202ENST00000381897 EGFEM1PQ0D2K5 195 aa3.85□□□□□ -1.79
RFC1-202ENST00000381897 MOBPQ13875 183 aa3.85□□□□□ -1.79
RFC1-202ENST00000381897 Q1T7F1 81 aa3.85□□□□□ -1.79
RFC1-202ENST00000381897 UNQ6190/PRO20217Q6UXQ8 127 aa3.85□□□□□ -1.79
RFC1-202ENST00000381897 LELP1Q5T871 98 aa3.84□□□□□ -1.79
RFC1-202ENST00000381897 Q6ZR54 194 aa3.84□□□□□ -1.79
RFC1-202ENST00000381897 F8P00451 2351 aa3.84□□□□□ -1.8
RFC1-202ENST00000381897 SMR3AQ99954 134 aa3.84□□□□□ -1.8
RFC1-202ENST00000381897 IGSF10Q6WRI0 2623 aa3.83□□□□□ -1.8
RFC1-202ENST00000381897 FBN2P35556 2912 aa3.83□□□□□ -1.8
RFC1-202ENST00000381897 KRTAP21-3Q3LHN1 58 aa3.83□□□□□ -1.8
RFC1-202ENST00000381897 GVQW2A0A096LPI5 108 aaPredicted RBP3.83□□□□□ -1.8
RFC1-202ENST00000381897 C1orf137Q5JT78 98 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 229 ms