RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 HTN3P15516 51 aa12.53□□□□□ -0.4
SMARCD1-201ENST00000381513 FAM208BQ5VWN6 2430 aa12.53□□□□□ -0.4
SMARCD1-201ENST00000381513 A6NED7 52 aa12.52□□□□□ -0.4
SMARCD1-201ENST00000381513 NDUFB1O75438 58 aa12.52□□□□□ -0.4
SMARCD1-201ENST00000381513 MP68P56378 58 aa12.52□□□□□ -0.41
SMARCD1-201ENST00000381513 CCDC168Q8NDH2 2452 aa12.52□□□□□ -0.41
SMARCD1-201ENST00000381513 UTP20O75691 2785 aaKnown RBP12.52□□□□□ -0.41
SMARCD1-201ENST00000381513 WFDC13Q8IUB5 93 aa12.52□□□□□ -0.41
SMARCD1-201ENST00000381513 CFAP46Q8IYW2 2715 aa12.51□□□□□ -0.41
SMARCD1-201ENST00000381513 NF1P21359 2839 aa12.51□□□□□ -0.41
SMARCD1-201ENST00000381513 LINC00208Q96KT6 92 aa12.51□□□□□ -0.41
SMARCD1-201ENST00000381513 Q8N377 158 aa12.51□□□□□ -0.41
SMARCD1-201ENST00000381513 AKAP9Q99996 3911 aa12.51□□□□□ -0.41
SMARCD1-201ENST00000381513 A0A1W2PNM2 257 aa12.5□□□□□ -0.41
SMARCD1-201ENST00000381513 C1orf137Q5JT78 98 aa12.5□□□□□ -0.41
SMARCD1-201ENST00000381513 F8P00451 2351 aa12.49□□□□□ -0.41
SMARCD1-201ENST00000381513 DSCR10P59022 87 aa12.48□□□□□ -0.41
SMARCD1-201ENST00000381513 TEX15Q9BXT5 2789 aa12.48□□□□□ -0.41
SMARCD1-201ENST00000381513 C19orf73Q9NVV2 129 aa12.47□□□□□ -0.41
SMARCD1-201ENST00000381513 GVQW2A0A096LPI5 108 aaPredicted RBP12.46□□□□□ -0.41
SMARCD1-201ENST00000381513 WFDC10BQ8IUB3 73 aa12.46□□□□□ -0.41
SMARCD1-201ENST00000381513 LIMD2Q9BT23 127 aa12.46□□□□□ -0.41
SMARCD1-201ENST00000381513 Q8N9P0 234 aaPredicted RBP12.45□□□□□ -0.42
SMARCD1-201ENST00000381513 DSCR9P59020 149 aa12.44□□□□□ -0.42
SMARCD1-201ENST00000381513 IGLV5-48A0A075B6I7 105 aa12.43□□□□□ -0.42
SMARCD1-201ENST00000381513 NKAPP1Q8N9T2 125 aa12.43□□□□□ -0.42
SMARCD1-201ENST00000381513 CACNA1AO00555 2505 aa12.42□□□□□ -0.42
SMARCD1-201ENST00000381513 Q8NBF4 154 aa12.42□□□□□ -0.42
SMARCD1-201ENST00000381513 ATP11AUNQ6ZP68 121 aa12.41□□□□□ -0.42
SMARCD1-201ENST00000381513 ABCA12Q86UK0 2595 aa12.41□□□□□ -0.42
SMARCD1-201ENST00000381513 DNAJC9-AS1A6NH13 148 aa12.41□□□□□ -0.42
SMARCD1-201ENST00000381513 LCA10Q71F78 164 aa12.41□□□□□ -0.42
SMARCD1-201ENST00000381513 HIVEP2P31629 2446 aa12.41□□□□□ -0.42
SMARCD1-201ENST00000381513 NDUFS5O43920 106 aa12.39□□□□□ -0.43
SMARCD1-201ENST00000381513 IGLV1-51P01701 117 aa12.39□□□□□ -0.43
SMARCD1-201ENST00000381513 MYO18BQ8IUG5 2567 aa12.38□□□□□ -0.43
SMARCD1-201ENST00000381513 EGFEM1PQ0D2K5 195 aa12.37□□□□□ -0.43
SMARCD1-201ENST00000381513 FLNCQ14315 2725 aa12.37□□□□□ -0.43
SMARCD1-201ENST00000381513 X6R8D5 127 aa12.37□□□□□ -0.43
SMARCD1-201ENST00000381513 RPL37AP8A6NKH3 93 aa12.36□□□□□ -0.43
SMARCD1-201ENST00000381513 DOPEY1Q5JWR5 2465 aa12.36□□□□□ -0.43
SMARCD1-201ENST00000381513 FSHBP01225 129 aa12.36□□□□□ -0.43
SMARCD1-201ENST00000381513 A0A0G2JQZ4 141 aa12.35□□□□□ -0.43
SMARCD1-201ENST00000381513 A0A1W2PNN7 141 aa12.35□□□□□ -0.43
SMARCD1-201ENST00000381513 LELP1Q5T871 98 aa12.35□□□□□ -0.43
SMARCD1-201ENST00000381513 MTORP42345 2549 aa12.35□□□□□ -0.43
SMARCD1-201ENST00000381513 APOC4P55056 127 aa12.34□□□□□ -0.43
SMARCD1-201ENST00000381513 DEFB135Q30KP9 77 aa12.33□□□□□ -0.43
SMARCD1-201ENST00000381513 A0A1B0GW54 56 aa12.33□□□□□ -0.44
SMARCD1-201ENST00000381513 C11orf45Q8TAV5 145 aa12.33□□□□□ -0.44
SMARCD1-201ENST00000381513 PRR34Q9NV39 138 aa12.33□□□□□ -0.44
SMARCD1-201ENST00000381513 H0Y9P7 68 aa12.33□□□□□ -0.44
SMARCD1-201ENST00000381513 C7orf33Q8WU49 177 aa12.31□□□□□ -0.44
SMARCD1-201ENST00000381513 KCNQ1DNQ9H478 68 aa12.3□□□□□ -0.44
SMARCD1-201ENST00000381513 DHRS4-AS1Q9P1J3 65 aa12.3□□□□□ -0.44
SMARCD1-201ENST00000381513 A6NN06 94 aa12.29□□□□□ -0.44
SMARCD1-201ENST00000381513 RPL37AP61513 92 aaKnown RBP12.28□□□□□ -0.44
SMARCD1-201ENST00000381513 SERTAD4-AS1Q5TG53 156 aa12.28□□□□□ -0.44
SMARCD1-201ENST00000381513 Q75L30 129 aa12.27□□□□□ -0.44
SMARCD1-201ENST00000381513 SPRR4Q96PI1 79 aa12.27□□□□□ -0.44
SMARCD1-201ENST00000381513 C4orf48Q5BLP8 95 aa12.27□□□□□ -0.45
SMARCD1-201ENST00000381513 PHF5AQ7RTV0 110 aaKnown RBP12.27□□□□□ -0.45
SMARCD1-201ENST00000381513 C7orf65Q6ZTY9 151 aa12.26□□□□□ -0.45
SMARCD1-201ENST00000381513 Q9BRP9 147 aa12.26□□□□□ -0.45
SMARCD1-201ENST00000381513 Q6ZRX8 168 aa12.26□□□□□ -0.45
SMARCD1-201ENST00000381513 UNC79Q9P2D8 2635 aa12.26□□□□□ -0.45
SMARCD1-201ENST00000381513 COA5Q86WW8 74 aa12.25□□□□□ -0.45
SMARCD1-201ENST00000381513 TNP2Q05952 138 aa12.24□□□□□ -0.45
SMARCD1-201ENST00000381513 SPANXA2-OT1Q8N9U9 137 aa12.24□□□□□ -0.45
SMARCD1-201ENST00000381513 IGSF10Q6WRI0 2623 aa12.24□□□□□ -0.45
SMARCD1-201ENST00000381513 CDC42SE1Q9NRR8 79 aa12.23□□□□□ -0.45
SMARCD1-201ENST00000381513 A0A087WSZ3 146 aa12.23□□□□□ -0.45
SMARCD1-201ENST00000381513 SPAG11AQ6PDA7 123 aa12.23□□□□□ -0.45
SMARCD1-201ENST00000381513 LOC101927531A0A1B0GV80 90 aa12.22□□□□□ -0.45
SMARCD1-201ENST00000381513 IGKV2D-24A0A075B6R9 120 aa12.21□□□□□ -0.46
SMARCD1-201ENST00000381513 LINC00476Q8WZB0 136 aa12.21□□□□□ -0.46
SMARCD1-201ENST00000381513 CASC2Q6XLA1 102 aa12.2□□□□□ -0.46
SMARCD1-201ENST00000381513 C15orf56Q8N910 161 aa12.2□□□□□ -0.46
SMARCD1-201ENST00000381513 MOBPQ13875 183 aa12.18□□□□□ -0.46
SMARCD1-201ENST00000381513 PCOTHQ58A44 107 aa12.18□□□□□ -0.46
SMARCD1-201ENST00000381513 ACANP16112 2415 aa12.16□□□□□ -0.46
SMARCD1-201ENST00000381513 FAM168BA1KXE4 195 aa12.16□□□□□ -0.46
SMARCD1-201ENST00000381513 ZNF462Q96JM2 2506 aa12.15□□□□□ -0.46
SMARCD1-201ENST00000381513 SPART-AS1P0CW21 52 aa12.14□□□□□ -0.47
SMARCD1-201ENST00000381513 C8orf87E5RJ46 101 aa12.13□□□□□ -0.47
SMARCD1-201ENST00000381513 USP24Q9UPU5 2620 aa12.12□□□□□ -0.47
SMARCD1-201ENST00000381513 IGFL1Q6UW32 110 aa12.12□□□□□ -0.47
SMARCD1-201ENST00000381513 H3BPC8 53 aa12.12□□□□□ -0.47
SMARCD1-201ENST00000381513 SPINK7P58062 85 aa12.09□□□□□ -0.47
SMARCD1-201ENST00000381513 C9orf163Q8N9P6 203 aa12.08□□□□□ -0.48
SMARCD1-201ENST00000381513 PRAC1Q96KF2 57 aa12.08□□□□□ -0.48
SMARCD1-201ENST00000381513 IGLV1-50A0A075B6I6 118 aa12.07□□□□□ -0.48
SMARCD1-201ENST00000381513 KRTAP29-1A8MX34 341 aaPredicted RBP12.07□□□□□ -0.48
SMARCD1-201ENST00000381513 KRTAP10-9P60411 292 aa12.07□□□□□ -0.48
SMARCD1-201ENST00000381513 KRTAP26-1Q6PEX3 210 aa12.06□□□□□ -0.48
SMARCD1-201ENST00000381513 KRTAP4-16G5E9R7 235 aaPredicted RBP12.05□□□□□ -0.48
SMARCD1-201ENST00000381513 H0Y9J4 135 aa12.05□□□□□ -0.48
SMARCD1-201ENST00000381513 IGLV7-46A0A075B6I9 117 aa12.03□□□□□ -0.48
SMARCD1-201ENST00000381513 FLNAP21333 2647 aaKnown RBP12.03□□□□□ -0.48
SMARCD1-201ENST00000381513 Q8NAQ8 132 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms