RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 KALRNO60229 2985 aa11.57□□□□□ -0.56
SGCB-201ENST00000381431 ST20-AS1Q8NBB2 130 aa11.57□□□□□ -0.56
SGCB-201ENST00000381431 H3BNG1 76 aa11.56□□□□□ -0.56
SGCB-201ENST00000381431 Q6ZRP5 223 aa11.56□□□□□ -0.56
SGCB-201ENST00000381431 TACC2O95359 2948 aa11.56□□□□□ -0.56
SGCB-201ENST00000381431 RETNLBQ9BQ08 111 aa11.55□□□□□ -0.56
SGCB-201ENST00000381431 ADGRG4Q8IZF6 3080 aa11.55□□□□□ -0.56
SGCB-201ENST00000381431 LINC00588Q9Y4M8 146 aa11.54□□□□□ -0.56
SGCB-201ENST00000381431 TRBV7-6A0A0J9YX20 115 aa11.53□□□□□ -0.56
SGCB-201ENST00000381431 VPREB1P12018 145 aa11.53□□□□□ -0.56
SGCB-201ENST00000381431 Q6ZRX8 168 aa11.52□□□□□ -0.56
SGCB-201ENST00000381431 ASPMQ8IZT6 3477 aa11.52□□□□□ -0.57
SGCB-201ENST00000381431 MDFIQ99750 246 aa11.52□□□□□ -0.57
SGCB-201ENST00000381431 PRR15LQ9BU68 103 aa11.52□□□□□ -0.57
SGCB-201ENST00000381431 C1orf134Q5TEV5 83 aa11.51□□□□□ -0.57
SGCB-201ENST00000381431 TM2D3Q9BRN9 247 aa11.51□□□□□ -0.57
SGCB-201ENST00000381431 Q8NBF4 154 aa11.5□□□□□ -0.57
SGCB-201ENST00000381431 PHF5AQ7RTV0 110 aaKnown RBP11.5□□□□□ -0.57
SGCB-201ENST00000381431 IGLV6-57P01721 117 aa11.5□□□□□ -0.57
SGCB-201ENST00000381431 LOC110117498A0A087WWA1 95 aa11.49□□□□□ -0.57
SGCB-201ENST00000381431 CHTF8P0CG12 524 aa11.49□□□□□ -0.57
SGCB-201ENST00000381431 LINC00476Q8WZB0 136 aa11.49□□□□□ -0.57
SGCB-201ENST00000381431 FLNCQ14315 2725 aa11.49□□□□□ -0.57
SGCB-201ENST00000381431 FAM168BA1KXE4 195 aa11.48□□□□□ -0.57
SGCB-201ENST00000381431 GVQW2A0A096LPI5 108 aaPredicted RBP11.48□□□□□ -0.57
SGCB-201ENST00000381431 C1orf195Q5TG92 126 aa11.47□□□□□ -0.57
SGCB-201ENST00000381431 C1orf64Q8NEQ6 169 aa11.46□□□□□ -0.57
SGCB-201ENST00000381431 IGSF10Q6WRI0 2623 aa11.46□□□□□ -0.58
SGCB-201ENST00000381431 KRTAP10-3P60369 221 aa11.46□□□□□ -0.58
SGCB-201ENST00000381431 SERTAD4-AS1Q5TG53 156 aa11.45□□□□□ -0.58
SGCB-201ENST00000381431 NHLRC4P0CG21 123 aaPredicted RBP11.44□□□□□ -0.58
SGCB-201ENST00000381431 MOBPQ13875 183 aa11.44□□□□□ -0.58
SGCB-201ENST00000381431 COL12A1Q99715 3063 aa11.43□□□□□ -0.58
SGCB-201ENST00000381431 PMAIP1Q13794 54 aa11.43□□□□□ -0.58
SGCB-201ENST00000381431 C9orf129Q5T035 196 aaKnown RBP11.43□□□□□ -0.58
SGCB-201ENST00000381431 PRR34Q9NV39 138 aa11.42□□□□□ -0.58
SGCB-201ENST00000381431 EPM2AB3EWF7 344 aa11.41□□□□□ -0.58
SGCB-201ENST00000381431 DNAH10OSP0CZ25 163 aa11.41□□□□□ -0.58
SGCB-201ENST00000381431 hDV103S1A0JD37 113 aa11.4□□□□□ -0.58
SGCB-201ENST00000381431 RPL37AP61513 92 aaKnown RBP11.4□□□□□ -0.58
SGCB-201ENST00000381431 C4orf26Q17RF5 130 aa11.4□□□□□ -0.58
SGCB-201ENST00000381431 BCE1O60756 84 aa11.39□□□□□ -0.59
SGCB-201ENST00000381431 SPINK1P00995 79 aa11.39□□□□□ -0.59
SGCB-201ENST00000381431 KRTAP1-3Q8IUG1 177 aa11.39□□□□□ -0.59
SGCB-201ENST00000381431 LINC00528Q8N1L1 170 aa11.39□□□□□ -0.59
SGCB-201ENST00000381431 ITPR1Q14643 2758 aa11.38□□□□□ -0.59
SGCB-201ENST00000381431 C16orf90A8MZG2 172 aa11.38□□□□□ -0.59
SGCB-201ENST00000381431 LINC00612Q8N6U2 182 aa11.38□□□□□ -0.59
SGCB-201ENST00000381431 ZZEF1O43149 2961 aa11.37□□□□□ -0.59
SGCB-201ENST00000381431 KRTAP10-11P60412 298 aa11.37□□□□□ -0.59
SGCB-201ENST00000381431 C15orf56Q8N910 161 aa11.36□□□□□ -0.59
SGCB-201ENST00000381431 NBDYA0A0U1RRE5 68 aa11.35□□□□□ -0.59
SGCB-201ENST00000381431 RPS28P62857 69 aaKnown RBP11.35□□□□□ -0.59
SGCB-201ENST00000381431 NSD1Q96L73 2696 aaPredicted RBP11.35□□□□□ -0.59
SGCB-201ENST00000381431 K7ERS5 55 aa11.34□□□□□ -0.59
SGCB-201ENST00000381431 ASH1LQ9NR48 2969 aaKnown RBP11.34□□□□□ -0.59
SGCB-201ENST00000381431 TNRC18O15417 2968 aaPredicted RBP11.34□□□□□ -0.59
SGCB-201ENST00000381431 TRBV7-4A0A0J9YYF1 115 aa11.34□□□□□ -0.59
SGCB-201ENST00000381431 A0A1B0GW54 56 aa11.34□□□□□ -0.59
SGCB-201ENST00000381431 KCNQ1DNQ9H478 68 aa11.33□□□□□ -0.6
SGCB-201ENST00000381431 A0A0G2JQZ4 141 aa11.32□□□□□ -0.6
SGCB-201ENST00000381431 A0A1W2PNN7 141 aa11.32□□□□□ -0.6
SGCB-201ENST00000381431 IGKV2D-30A0A075B6S6 120 aa11.32□□□□□ -0.6
SGCB-201ENST00000381431 IGKV2-30P06310 120 aa11.32□□□□□ -0.6
SGCB-201ENST00000381431 K7EQZ3 153 aa11.31□□□□□ -0.6
SGCB-201ENST00000381431 KRTAP1-1Q07627 177 aa11.31□□□□□ -0.6
SGCB-201ENST00000381431 SPACA4Q8TDM5 124 aa11.31□□□□□ -0.6
SGCB-201ENST00000381431 IGLV1-50A0A075B6I6 118 aa11.31□□□□□ -0.6
SGCB-201ENST00000381431 FAM104AQ969W3 186 aa11.3□□□□□ -0.6
SGCB-201ENST00000381431 Q8N377 158 aa11.28□□□□□ -0.6
SGCB-201ENST00000381431 K7EIL1 84 aa11.27□□□□□ -0.6
SGCB-201ENST00000381431 RTL8CO15255 209 aa11.26□□□□□ -0.61
SGCB-201ENST00000381431 CR1P17927 2039 aa11.26□□□□□ -0.61
SGCB-201ENST00000381431 MUC3AQ02505 3323 aa11.25□□□□□ -0.61
SGCB-201ENST00000381431 TRAV22A0A0B4J277 110 aa11.25□□□□□ -0.61
SGCB-201ENST00000381431 CASC10Q5T4H9 136 aa11.24□□□□□ -0.61
SGCB-201ENST00000381431 PRO0628Q9UI54 55 aa11.23□□□□□ -0.61
SGCB-201ENST00000381431 TP53AIP1Q9HCN2 124 aa11.22□□□□□ -0.61
SGCB-201ENST00000381431 LRBAP50851 2863 aa11.22□□□□□ -0.61
SGCB-201ENST00000381431 SPAG11AQ6PDA7 123 aa11.21□□□□□ -0.61
SGCB-201ENST00000381431 IGFL1Q6UW32 110 aa11.21□□□□□ -0.62
SGCB-201ENST00000381431 BAHCC1Q9P281 2608 aa11.2□□□□□ -0.62
SGCB-201ENST00000381431 ZFHX4Q86UP3 3567 aa11.2□□□□□ -0.62
SGCB-201ENST00000381431 LIMD2Q9BT23 127 aa11.19□□□□□ -0.62
SGCB-201ENST00000381431 ERC2-IT1O76042 136 aa11.18□□□□□ -0.62
SGCB-201ENST00000381431 STAB2Q8WWQ8 2551 aa11.16□□□□□ -0.62
SGCB-201ENST00000381431 A8MWP4 228 aa11.15□□□□□ -0.63
SGCB-201ENST00000381431 KLKP1Q107X0 134 aa11.14□□□□□ -0.63
SGCB-201ENST00000381431 DMXL1Q9Y485 3027 aa11.12□□□□□ -0.63
SGCB-201ENST00000381431 A0A1W2PNM2 257 aa11.12□□□□□ -0.63
SGCB-201ENST00000381431 CUBNO60494 3623 aa11.12□□□□□ -0.63
SGCB-201ENST00000381431 H3BPC8 53 aa11.11□□□□□ -0.63
SGCB-201ENST00000381431 H7BZZ5 65 aa11.11□□□□□ -0.63
SGCB-201ENST00000381431 UTP20O75691 2785 aaKnown RBP11.11□□□□□ -0.63
SGCB-201ENST00000381431 ITPR2Q14571 2701 aa11.1□□□□□ -0.63
SGCB-201ENST00000381431 ANAPC11Q9NYG5 84 aa11.1□□□□□ -0.63
SGCB-201ENST00000381431 LINC00313P59037 77 aa11.09□□□□□ -0.63
SGCB-201ENST00000381431 C9orf163Q8N9P6 203 aa11.09□□□□□ -0.63
SGCB-201ENST00000381431 C7orf65Q6ZTY9 151 aa11.09□□□□□ -0.63
SGCB-201ENST00000381431 TLX1NBP0CAT3 122 aa11.08□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms