RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 CRIPTQ9P021 101 aa3.39□□□□□ -1.87
PTPRD-203ENST00000381196 KRTAP24-1Q3LI83 254 aa3.39□□□□□ -1.87
PTPRD-203ENST00000381196 ODF3L2Q3SX64 289 aa3.38□□□□□ -1.87
PTPRD-203ENST00000381196 LINC01556Q5JQF7 62 aa3.38□□□□□ -1.87
PTPRD-203ENST00000381196 C16orf90A8MZG2 172 aa3.38□□□□□ -1.87
PTPRD-203ENST00000381196 PHF5AQ7RTV0 110 aaKnown RBP3.38□□□□□ -1.87
PTPRD-203ENST00000381196 TRANK1O15050 2925 aa3.38□□□□□ -1.87
PTPRD-203ENST00000381196 CR1P17927 2039 aa3.38□□□□□ -1.87
PTPRD-203ENST00000381196 TLX1NBP0CAT3 122 aa3.37□□□□□ -1.87
PTPRD-203ENST00000381196 A0A087WVE0 104 aa3.37□□□□□ -1.87
PTPRD-203ENST00000381196 KIAA0087Q14695 138 aa3.37□□□□□ -1.87
PTPRD-203ENST00000381196 C6orf48Q9UBA6 75 aa3.37□□□□□ -1.87
PTPRD-203ENST00000381196 IGLV5-37A0A075B6J1 123 aa3.37□□□□□ -1.87
PTPRD-203ENST00000381196 NIPBLQ6KC79 2804 aaeCLIP3.37□□□□□ -1.87
PTPRD-203ENST00000381196 HIVEP1P15822 2718 aa3.37□□□□□ -1.87
PTPRD-203ENST00000381196 Q5XG85 94 aa3.36□□□□□ -1.87
PTPRD-203ENST00000381196 FAM104AQ969W3 186 aa3.36□□□□□ -1.87
PTPRD-203ENST00000381196 CYSRT1A8MQ03 144 aa3.36□□□□□ -1.87
PTPRD-203ENST00000381196 IGKV2D-30A0A075B6S6 120 aa3.36□□□□□ -1.87
PTPRD-203ENST00000381196 IGKV2-30P06310 120 aa3.36□□□□□ -1.87
PTPRD-203ENST00000381196 PROK1P58294 105 aa3.36□□□□□ -1.87
PTPRD-203ENST00000381196 OCR1Q9BZK8 76 aa3.36□□□□□ -1.87
PTPRD-203ENST00000381196 A0A087WSZ3 146 aa3.36□□□□□ -1.87
PTPRD-203ENST00000381196 IGLV5-48A0A075B6I7 105 aa3.36□□□□□ -1.87
PTPRD-203ENST00000381196 TENM3Q9P273 2699 aa3.36□□□□□ -1.87
PTPRD-203ENST00000381196 A0A1W2PPR1 153 aa3.35□□□□□ -1.87
PTPRD-203ENST00000381196 SPRR4Q96PI1 79 aa3.34□□□□□ -1.87
PTPRD-203ENST00000381196 CHD9Q3L8U1 2897 aa3.34□□□□□ -1.87
PTPRD-203ENST00000381196 SSBP3-AS1Q7Z2R9 100 aa3.34□□□□□ -1.87
PTPRD-203ENST00000381196 LINC00612Q8N6U2 182 aa3.34□□□□□ -1.87
PTPRD-203ENST00000381196 DMAC1Q96GE9 116 aa3.34□□□□□ -1.87
PTPRD-203ENST00000381196 IGLV4-60A0A075B6I1 120 aa3.34□□□□□ -1.88
PTPRD-203ENST00000381196 LUZP6Q538Z0 58 aa3.33□□□□□ -1.88
PTPRD-203ENST00000381196 LINC00528Q8N1L1 170 aa3.33□□□□□ -1.88
PTPRD-203ENST00000381196 COX6A2Q02221 97 aa3.33□□□□□ -1.88
PTPRD-203ENST00000381196 LINC01554Q52M75 96 aa3.33□□□□□ -1.88
PTPRD-203ENST00000381196 FAM218AQ96MZ4 157 aa3.33□□□□□ -1.88
PTPRD-203ENST00000381196 NOTCH2NLQ7Z3S9 236 aa3.33□□□□□ -1.88
PTPRD-203ENST00000381196 SMIM29Q86T20 159 aa3.33□□□□□ -1.88
PTPRD-203ENST00000381196 ITPR1Q14643 2758 aa3.33□□□□□ -1.88
PTPRD-203ENST00000381196 GAS8-AS1O95177 125 aa3.33□□□□□ -1.88
PTPRD-203ENST00000381196 C22orf24Q9Y442 160 aa3.33□□□□□ -1.88
PTPRD-203ENST00000381196 COA5Q86WW8 74 aa3.32□□□□□ -1.88
PTPRD-203ENST00000381196 COX6B2Q6YFQ2 88 aa3.32□□□□□ -1.88
PTPRD-203ENST00000381196 LINC01558Q9Y6Z2 57 aa3.32□□□□□ -1.88
PTPRD-203ENST00000381196 IGLV7-46A0A075B6I9 117 aa3.31□□□□□ -1.88
PTPRD-203ENST00000381196 IGLV8-61A0A075B6I0 122 aa3.31□□□□□ -1.88
PTPRD-203ENST00000381196 NBDYA0A0U1RRE5 68 aa3.31□□□□□ -1.88
PTPRD-203ENST00000381196 LCE6AA0A183 80 aa3.31□□□□□ -1.88
PTPRD-203ENST00000381196 TNP2Q05952 138 aa3.31□□□□□ -1.88
PTPRD-203ENST00000381196 UNQ6190/PRO20217Q6UXQ8 127 aa3.31□□□□□ -1.88
PTPRD-203ENST00000381196 PRR34Q9NV39 138 aa3.3□□□□□ -1.88
PTPRD-203ENST00000381196 Q9UF83 564 aa3.3□□□□□ -1.88
PTPRD-203ENST00000381196 RTL8CO15255 209 aa3.29□□□□□ -1.88
PTPRD-203ENST00000381196 APCP25054 2843 aa3.29□□□□□ -1.88
PTPRD-203ENST00000381196 TENM1Q9UKZ4 2725 aa3.29□□□□□ -1.88
PTPRD-203ENST00000381196 RBM12B-AS1Q9P1G2 102 aa3.29□□□□□ -1.88
PTPRD-203ENST00000381196 C15orf56Q8N910 161 aa3.29□□□□□ -1.88
PTPRD-203ENST00000381196 KALRNO60229 2985 aa3.29□□□□□ -1.88
PTPRD-203ENST00000381196 LINC00483Q53H64 154 aa3.28□□□□□ -1.88
PTPRD-203ENST00000381196 LINC00313P59037 77 aa3.28□□□□□ -1.88
PTPRD-203ENST00000381196 SPACA4Q8TDM5 124 aa3.28□□□□□ -1.89
PTPRD-203ENST00000381196 MIR22HGQ0VDD5 57 aa3.27□□□□□ -1.89
PTPRD-203ENST00000381196 CSNK1G2-AS1Q8NCQ2 148 aa3.27□□□□□ -1.89
PTPRD-203ENST00000381196 LINC00588Q9Y4M8 146 aa3.27□□□□□ -1.89
PTPRD-203ENST00000381196 DNAH10OSP0CZ25 163 aa3.26□□□□□ -1.89
PTPRD-203ENST00000381196 APLNQ9ULZ1 77 aa3.26□□□□□ -1.89
PTPRD-203ENST00000381196 A0A0A0MQY5 61 aa3.26□□□□□ -1.89
PTPRD-203ENST00000381196 Q8NAQ8 132 aa3.26□□□□□ -1.89
PTPRD-203ENST00000381196 NF1P21359 2839 aa3.25□□□□□ -1.89
PTPRD-203ENST00000381196 FP248Q71RG6 208 aaPredicted RBP3.25□□□□□ -1.89
PTPRD-203ENST00000381196 TYMSOSQ8TAI1 123 aa3.25□□□□□ -1.89
PTPRD-203ENST00000381196 A0A1B0GVX0 72 aa3.24□□□□□ -1.89
PTPRD-203ENST00000381196 MRPL34Q9BQ48 92 aaKnown RBP3.24□□□□□ -1.89
PTPRD-203ENST00000381196 DEFB116Q30KQ4 102 aa3.24□□□□□ -1.89
PTPRD-203ENST00000381196 Q6ZSN1 163 aa3.24□□□□□ -1.89
PTPRD-203ENST00000381196 LINC00476Q8WZB0 136 aa3.24□□□□□ -1.89
PTPRD-203ENST00000381196 EP400Q96L91 3159 aa3.24□□□□□ -1.89
PTPRD-203ENST00000381196 Q8N9P0 234 aaPredicted RBP3.24□□□□□ -1.89
PTPRD-203ENST00000381196 CHTF8P0CG12 524 aa3.23□□□□□ -1.89
PTPRD-203ENST00000381196 K7EIL1 84 aa3.23□□□□□ -1.89
PTPRD-203ENST00000381196 CNBPP62633 177 aaKnown RBP3.23□□□□□ -1.89
PTPRD-203ENST00000381196 SPRR1BP22528 89 aa3.22□□□□□ -1.89
PTPRD-203ENST00000381196 ANAPC11Q9NYG5 84 aa3.22□□□□□ -1.89
PTPRD-203ENST00000381196 IGLV1-50A0A075B6I6 118 aa3.22□□□□□ -1.89
PTPRD-203ENST00000381196 Q96NJ1 140 aa3.22□□□□□ -1.89
PTPRD-203ENST00000381196 ZCCHC13Q8WW36 166 aaKnown RBP3.22□□□□□ -1.89
PTPRD-203ENST00000381196 CENPFP49454 3210 aa3.21□□□□□ -1.89
PTPRD-203ENST00000381196 C9orf129Q5T035 196 aaKnown RBP3.21□□□□□ -1.9
PTPRD-203ENST00000381196 C8orf17Q9NRJ1 99 aa3.21□□□□□ -1.9
PTPRD-203ENST00000381196 Q5VV11 94 aa3.21□□□□□ -1.9
PTPRD-203ENST00000381196 PRR3P79522 188 aaKnown RBP3.21□□□□□ -1.9
PTPRD-203ENST00000381196 NBEAL2Q6ZNJ1 2754 aa3.2□□□□□ -1.9
PTPRD-203ENST00000381196 Q6ZR54 194 aa3.2□□□□□ -1.9
PTPRD-203ENST00000381196 K7EQZ3 153 aa3.2□□□□□ -1.9
PTPRD-203ENST00000381196 FAM229BQ4G0N7 80 aa3.19□□□□□ -1.9
PTPRD-203ENST00000381196 LINC00304Q8N9R0 145 aa3.19□□□□□ -1.9
PTPRD-203ENST00000381196 SPRR1AP35321 89 aa3.18□□□□□ -1.9
PTPRD-203ENST00000381196 ZNF575Q86XF7 245 aa3.18□□□□□ -1.9
PTPRD-203ENST00000381196 ST20-AS1Q8NBB2 130 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms