RNA–Protein interactions for RNA: ENST00000380962.9

LCMT1-201, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 2

Gene LCMT1, Length 1,529 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-201ENST00000380962 TRBV7-4A0A0J9YYF1 115 aa8.65□□□□□ -1.02
LCMT1-201ENST00000380962 SERTAD4-AS1Q5TG53 156 aa8.65□□□□□ -1.02
LCMT1-201ENST00000380962 CASC10Q5T4H9 136 aa8.64□□□□□ -1.03
LCMT1-201ENST00000380962 DHRS4-AS1Q9P1J3 65 aa8.64□□□□□ -1.03
LCMT1-201ENST00000380962 SPRR1AP35321 89 aa8.64□□□□□ -1.03
LCMT1-201ENST00000380962 ATOX1O00244 68 aa8.63□□□□□ -1.03
LCMT1-201ENST00000380962 APLNQ9ULZ1 77 aa8.63□□□□□ -1.03
LCMT1-201ENST00000380962 DNAH1Q9P2D7 4330 aa8.63□□□□□ -1.03
LCMT1-201ENST00000380962 MGAM2Q2M2H8 2515 aa8.62□□□□□ -1.03
LCMT1-201ENST00000380962 IGLV1-50A0A075B6I6 118 aa8.62□□□□□ -1.03
LCMT1-201ENST00000380962 CNBPP62633 177 aaKnown RBP8.62□□□□□ -1.03
LCMT1-201ENST00000380962 C14orf177Q52M58 125 aa8.62□□□□□ -1.03
LCMT1-201ENST00000380962 IGKV3D-7A0A0C4DH55 119 aa8.61□□□□□ -1.03
LCMT1-201ENST00000380962 KRTAP4-16G5E9R7 235 aaPredicted RBP8.61□□□□□ -1.03
LCMT1-201ENST00000380962 Q6ZRX8 168 aa8.6□□□□□ -1.03
LCMT1-201ENST00000380962 UBE2DNLQ8IWF7 75 aa8.59□□□□□ -1.03
LCMT1-201ENST00000380962 PKIGQ9Y2B9 76 aa8.59□□□□□ -1.03
LCMT1-201ENST00000380962 B5MCH6 92 aa8.59□□□□□ -1.03
LCMT1-201ENST00000380962 CCDC179H3BU77 68 aa8.59□□□□□ -1.03
LCMT1-201ENST00000380962 MRPL55Q7Z7F7 128 aaKnown RBP8.59□□□□□ -1.03
LCMT1-201ENST00000380962 ETDCA0A1B0GVM5 59 aa8.58□□□□□ -1.04
LCMT1-201ENST00000380962 TGP01266 2768 aa8.58□□□□□ -1.04
LCMT1-201ENST00000380962 A0A1B0GW54 56 aa8.57□□□□□ -1.04
LCMT1-201ENST00000380962 NUPR2A6NF83 97 aa8.57□□□□□ -1.04
LCMT1-201ENST00000380962 C16orf90A8MZG2 172 aa8.57□□□□□ -1.04
LCMT1-201ENST00000380962 UQCRQO14949 82 aa8.57□□□□□ -1.04
LCMT1-201ENST00000380962 KRTAP1-5Q9BYS1 174 aa8.57□□□□□ -1.04
LCMT1-201ENST00000380962 CXCL6P80162 114 aa8.56□□□□□ -1.04
LCMT1-201ENST00000380962 KRTAP7-1Q8IUC3 87 aa8.56□□□□□ -1.04
LCMT1-201ENST00000380962 C3orf22Q8N5N4 141 aa8.56□□□□□ -1.04
LCMT1-201ENST00000380962 DYNC2H1Q8NCM8 4307 aaKnown RBP8.55□□□□□ -1.04
LCMT1-201ENST00000380962 FAM168BA1KXE4 195 aa8.55□□□□□ -1.04
LCMT1-201ENST00000380962 PSCAO43653 123 aa8.55□□□□□ -1.04
LCMT1-201ENST00000380962 BCE1O60756 84 aa8.55□□□□□ -1.04
LCMT1-201ENST00000380962 Q6ZVQ6 151 aa8.55□□□□□ -1.04
LCMT1-201ENST00000380962 DNAH9Q9NYC9 4486 aa8.55□□□□□ -1.04
LCMT1-201ENST00000380962 IGLV5-48A0A075B6I7 105 aa8.54□□□□□ -1.04
LCMT1-201ENST00000380962 COX7CP15954 63 aa8.54□□□□□ -1.04
LCMT1-201ENST00000380962 LINC01547P58512 204 aaPredicted RBP8.54□□□□□ -1.04
LCMT1-201ENST00000380962 Q8N377 158 aa8.54□□□□□ -1.04
LCMT1-201ENST00000380962 STAB2Q8WWQ8 2551 aa8.53□□□□□ -1.04
LCMT1-201ENST00000380962 RPL37AP8A6NKH3 93 aa8.53□□□□□ -1.04
LCMT1-201ENST00000380962 FAM19A5Q7Z5A7 132 aaPredicted RBP8.53□□□□□ -1.04
LCMT1-201ENST00000380962 Q9BRP9 147 aa8.53□□□□□ -1.04
LCMT1-201ENST00000380962 M0R2N4 97 aa8.52□□□□□ -1.05
LCMT1-201ENST00000380962 REG3GQ6UW15 175 aa8.52□□□□□ -1.05
LCMT1-201ENST00000380962 A0A087WVE0 104 aa8.5□□□□□ -1.05
LCMT1-201ENST00000380962 SERP2Q8N6R1 65 aa8.5□□□□□ -1.05
LCMT1-201ENST00000380962 A0A096LNI7 61 aa8.49□□□□□ -1.05
LCMT1-201ENST00000380962 NBDYA0A0U1RRE5 68 aa8.49□□□□□ -1.05
LCMT1-201ENST00000380962 CRYGAP11844 174 aa8.49□□□□□ -1.05
LCMT1-201ENST00000380962 TNP2Q05952 138 aa8.49□□□□□ -1.05
LCMT1-201ENST00000380962 HAMPP81172 84 aa8.48□□□□□ -1.05
LCMT1-201ENST00000380962 C9orf153Q5TBE3 101 aa8.48□□□□□ -1.05
LCMT1-201ENST00000380962 FAM19A1Q7Z5A9 133 aa8.48□□□□□ -1.05
LCMT1-201ENST00000380962 SMIM20Q8N5G0 67 aa8.46□□□□□ -1.05
LCMT1-201ENST00000380962 C9orf163Q8N9P6 203 aa8.46□□□□□ -1.05
LCMT1-201ENST00000380962 LINC00474Q9P2X8 69 aa8.46□□□□□ -1.05
LCMT1-201ENST00000380962 SS18L2Q9UHA2 77 aa8.46□□□□□ -1.05
LCMT1-201ENST00000380962 LRCOL1A6NCL2 159 aa8.45□□□□□ -1.06
LCMT1-201ENST00000380962 FUSP35637 526 aaKnown RBP eCLIP8.45□□□□□ -1.06
LCMT1-201ENST00000380962 UBE2BP63146 152 aa8.45□□□□□ -1.06
LCMT1-201ENST00000380962 DEFB105AQ8NG35 78 aa8.45□□□□□ -1.06
LCMT1-201ENST00000380962 H0Y9J4 135 aa8.44□□□□□ -1.06
LCMT1-201ENST00000380962 Q6ZRN7 208 aaPredicted RBP8.44□□□□□ -1.06
LCMT1-201ENST00000380962 A0A1W2PNN7 141 aa8.44□□□□□ -1.06
LCMT1-201ENST00000380962 IGKV2-24A0A0C4DH68 120 aa8.43□□□□□ -1.06
LCMT1-201ENST00000380962 NREPQ16612 68 aa8.43□□□□□ -1.06
LCMT1-201ENST00000380962 ERC2-IT1O76042 136 aa8.42□□□□□ -1.06
LCMT1-201ENST00000380962 C1orf137Q5JT78 98 aa8.42□□□□□ -1.06
LCMT1-201ENST00000380962 Q8NBF4 154 aa8.42□□□□□ -1.06
LCMT1-201ENST00000380962 SPRR4Q96PI1 79 aa8.42□□□□□ -1.06
LCMT1-201ENST00000380962 COL7A1Q02388 2944 aa8.42□□□□□ -1.06
LCMT1-201ENST00000380962 ST20-AS1Q8NBB2 130 aa8.41□□□□□ -1.06
LCMT1-201ENST00000380962 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.4□□□□□ -1.06
LCMT1-201ENST00000380962 PRKDCP78527 4128 aaKnown RBP8.4□□□□□ -1.06
LCMT1-201ENST00000380962 IGLV8-61A0A075B6I0 122 aa8.39□□□□□ -1.07
LCMT1-201ENST00000380962 TRAV7A0A075B6U4 112 aa8.39□□□□□ -1.07
LCMT1-201ENST00000380962 F8WEM9 126 aa8.39□□□□□ -1.07
LCMT1-201ENST00000380962 A0A1W2PNM2 257 aa8.39□□□□□ -1.07
LCMT1-201ENST00000380962 SMIM29Q86T20 159 aa8.39□□□□□ -1.07
LCMT1-201ENST00000380962 EPM2AB3EWF7 344 aa8.38□□□□□ -1.07
LCMT1-201ENST00000380962 BPY2O14599 106 aa8.37□□□□□ -1.07
LCMT1-201ENST00000380962 SPRR1BP22528 89 aa8.37□□□□□ -1.07
LCMT1-201ENST00000380962 PLECQ15149 4684 aaKnown RBP8.35□□□□□ -1.07
LCMT1-201ENST00000380962 C5orf47Q569G3 176 aa8.35□□□□□ -1.07
LCMT1-201ENST00000380962 C3orf84H3BNL1 204 aa8.34□□□□□ -1.07
LCMT1-201ENST00000380962 PHF5AQ7RTV0 110 aaKnown RBP8.34□□□□□ -1.07
LCMT1-201ENST00000380962 DNAH10Q8IVF4 4471 aa8.34□□□□□ -1.07
LCMT1-201ENST00000380962 IGKV4-1P06312 121 aa8.34□□□□□ -1.08
LCMT1-201ENST00000380962 CHTF8P0CG12 524 aa8.34□□□□□ -1.08
LCMT1-201ENST00000380962 RPS28P62857 69 aaKnown RBP8.34□□□□□ -1.08
LCMT1-201ENST00000380962 PRLHP81277 87 aa8.34□□□□□ -1.08
LCMT1-201ENST00000380962 LINC00476Q8WZB0 136 aa8.34□□□□□ -1.08
LCMT1-201ENST00000380962 TMEM258P61165 79 aa8.33□□□□□ -1.08
LCMT1-201ENST00000380962 SCXQ7RTU7 201 aa8.33□□□□□ -1.08
LCMT1-201ENST00000380962 DNAH7Q8WXX0 4024 aa8.32□□□□□ -1.08
LCMT1-201ENST00000380962 VPS13DQ5THJ4 4388 aa8.32□□□□□ -1.08
LCMT1-201ENST00000380962 Q6ZR54 194 aa8.32□□□□□ -1.08
LCMT1-201ENST00000380962 SPACA4Q8TDM5 124 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms