RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 CYP4F30PQ9H0H9 118 aa4.7□□□□□ -1.66
CCDC171-201ENST00000380701 KRTAP1-1Q07627 177 aa4.7□□□□□ -1.66
CCDC171-201ENST00000380701 FAM229BQ4G0N7 80 aa4.7□□□□□ -1.66
CCDC171-201ENST00000380701 SPRR4Q96PI1 79 aa4.7□□□□□ -1.66
CCDC171-201ENST00000380701 IGFL1Q6UW32 110 aa4.69□□□□□ -1.66
CCDC171-201ENST00000380701 KRTAP10-3P60369 221 aa4.68□□□□□ -1.66
CCDC171-201ENST00000380701 Q9UF83 564 aa4.68□□□□□ -1.66
CCDC171-201ENST00000380701 PRO0461Q9UI25 63 aa4.68□□□□□ -1.66
CCDC171-201ENST00000380701 ANKRD17O75179 2603 aaKnown RBP4.68□□□□□ -1.66
CCDC171-201ENST00000380701 SETD2Q9BYW2 2564 aaPredicted RBP4.68□□□□□ -1.66
CCDC171-201ENST00000380701 EPG5Q9HCE0 2579 aa4.68□□□□□ -1.66
CCDC171-201ENST00000380701 UQCR11O14957 56 aa4.67□□□□□ -1.66
CCDC171-201ENST00000380701 FAM168BA1KXE4 195 aa4.66□□□□□ -1.66
CCDC171-201ENST00000380701 C9orf129Q5T035 196 aaKnown RBP4.66□□□□□ -1.66
CCDC171-201ENST00000380701 SMCPP49901 116 aaPredicted RBP4.65□□□□□ -1.66
CCDC171-201ENST00000380701 PRO0628Q9UI54 55 aa4.65□□□□□ -1.67
CCDC171-201ENST00000380701 K7EQZ3 153 aa4.64□□□□□ -1.67
CCDC171-201ENST00000380701 LINC01600Q96MT4 127 aa4.64□□□□□ -1.67
CCDC171-201ENST00000380701 Q8N377 158 aa4.64□□□□□ -1.67
CCDC171-201ENST00000380701 DSCR10P59022 87 aa4.63□□□□□ -1.67
CCDC171-201ENST00000380701 OBSCN-AS1Q96MR7 158 aa4.63□□□□□ -1.67
CCDC171-201ENST00000380701 POLQO75417 2590 aa4.63□□□□□ -1.67
CCDC171-201ENST00000380701 A8MUN3 132 aa4.63□□□□□ -1.67
CCDC171-201ENST00000380701 CASC10Q5T4H9 136 aa4.62□□□□□ -1.67
CCDC171-201ENST00000380701 COA5Q86WW8 74 aa4.62□□□□□ -1.67
CCDC171-201ENST00000380701 CRIPTQ9P021 101 aa4.62□□□□□ -1.67
CCDC171-201ENST00000380701 ACANP16112 2415 aa4.61□□□□□ -1.67
CCDC171-201ENST00000380701 PCSK5Q92824 1860 aa4.61□□□□□ -1.67
CCDC171-201ENST00000380701 Q6ZSA8 131 aa4.61□□□□□ -1.67
CCDC171-201ENST00000380701 SPANXA2-OT1Q8N9U9 137 aa4.61□□□□□ -1.67
CCDC171-201ENST00000380701 IGLV5-48A0A075B6I7 105 aa4.6□□□□□ -1.67
CCDC171-201ENST00000380701 SMR3BP02814 79 aaPredicted RBP4.6□□□□□ -1.67
CCDC171-201ENST00000380701 A0A1W2PNN7 141 aa4.6□□□□□ -1.67
CCDC171-201ENST00000380701 IGLV7-46A0A075B6I9 117 aa4.59□□□□□ -1.67
CCDC171-201ENST00000380701 KLKP1Q107X0 134 aa4.59□□□□□ -1.67
CCDC171-201ENST00000380701 FLNBO75369 2602 aaKnown RBP4.59□□□□□ -1.67
CCDC171-201ENST00000380701 PLAC8Q9NZF1 115 aa4.58□□□□□ -1.68
CCDC171-201ENST00000380701 FAM104AQ969W3 186 aa4.58□□□□□ -1.68
CCDC171-201ENST00000380701 C9orf92A6NGG3 77 aa4.57□□□□□ -1.68
CCDC171-201ENST00000380701 TNP2Q05952 138 aa4.57□□□□□ -1.68
CCDC171-201ENST00000380701 SEC61BP60468 96 aaKnown RBP4.55□□□□□ -1.68
CCDC171-201ENST00000380701 MIR22HGQ0VDD5 57 aa4.55□□□□□ -1.68
CCDC171-201ENST00000380701 LCE6AA0A183 80 aa4.55□□□□□ -1.68
CCDC171-201ENST00000380701 A0A1W2PNM2 257 aa4.54□□□□□ -1.68
CCDC171-201ENST00000380701 HRES1P13985 223 aa4.53□□□□□ -1.68
CCDC171-201ENST00000380701 SPRR1BP22528 89 aa4.52□□□□□ -1.69
CCDC171-201ENST00000380701 CDC42SE1Q9NRR8 79 aa4.52□□□□□ -1.69
CCDC171-201ENST00000380701 SPINT4Q6UDR6 99 aa4.51□□□□□ -1.69
CCDC171-201ENST00000380701 HECTD1Q9ULT8 2610 aa4.51□□□□□ -1.69
CCDC171-201ENST00000380701 IGLV8-61A0A075B6I0 122 aa4.5□□□□□ -1.69
CCDC171-201ENST00000380701 OXTP01178 125 aa4.5□□□□□ -1.69
CCDC171-201ENST00000380701 FP248Q71RG6 208 aaPredicted RBP4.5□□□□□ -1.69
CCDC171-201ENST00000380701 MGAM2Q2M2H8 2515 aa4.5□□□□□ -1.69
CCDC171-201ENST00000380701 CSAG1Q6PB30 78 aa4.5□□□□□ -1.69
CCDC171-201ENST00000380701 SPRR1AP35321 89 aa4.49□□□□□ -1.69
CCDC171-201ENST00000380701 KRTAP21-3Q3LHN1 58 aa4.48□□□□□ -1.69
CCDC171-201ENST00000380701 PRR26Q8N8Z3 221 aa4.48□□□□□ -1.69
CCDC171-201ENST00000380701 ZCCHC13Q8WW36 166 aaKnown RBP4.48□□□□□ -1.69
CCDC171-201ENST00000380701 ANAPC11Q9NYG5 84 aa4.48□□□□□ -1.69
CCDC171-201ENST00000380701 M0R2T5 61 aa4.47□□□□□ -1.69
CCDC171-201ENST00000380701 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.47□□□□□ -1.69
CCDC171-201ENST00000380701 EIF4EBP3O60516 100 aaPredicted RBP4.46□□□□□ -1.69
CCDC171-201ENST00000380701 LINC00483Q53H64 154 aa4.46□□□□□ -1.7
CCDC171-201ENST00000380701 CAMK2N1Q7Z7J9 78 aa4.45□□□□□ -1.7
CCDC171-201ENST00000380701 H7BZZ5 65 aa4.43□□□□□ -1.7
CCDC171-201ENST00000380701 HELZ2Q9BYK8 2649 aaKnown RBP4.43□□□□□ -1.7
CCDC171-201ENST00000380701 Q5VSD8 79 aa4.43□□□□□ -1.7
CCDC171-201ENST00000380701 Q8N1X5 172 aa4.42□□□□□ -1.7
CCDC171-201ENST00000380701 LINC01554Q52M75 96 aa4.42□□□□□ -1.7
CCDC171-201ENST00000380701 DMAC1Q96GE9 116 aa4.41□□□□□ -1.7
CCDC171-201ENST00000380701 C4orf26Q17RF5 130 aa4.41□□□□□ -1.7
CCDC171-201ENST00000380701 LUZP6Q538Z0 58 aa4.41□□□□□ -1.7
CCDC171-201ENST00000380701 OCR1Q9BZK8 76 aa4.41□□□□□ -1.7
CCDC171-201ENST00000380701 A0A1B0GU33 70 aa4.4□□□□□ -1.7
CCDC171-201ENST00000380701 S4R3F8 94 aa4.4□□□□□ -1.7
CCDC171-201ENST00000380701 Q1T7F1 81 aa4.39□□□□□ -1.71
CCDC171-201ENST00000380701 A0A0G2JQZ4 141 aa4.39□□□□□ -1.71
CCDC171-201ENST00000380701 MMP24-AS1A0A0U1RRL7 71 aa4.38□□□□□ -1.71
CCDC171-201ENST00000380701 RPS29P62273 56 aaKnown RBP4.38□□□□□ -1.71
CCDC171-201ENST00000380701 USP24Q9UPU5 2620 aa4.37□□□□□ -1.71
CCDC171-201ENST00000380701 LCA10Q71F78 164 aa4.37□□□□□ -1.71
CCDC171-201ENST00000380701 MAST4O15021 2626 aa4.37□□□□□ -1.71
CCDC171-201ENST00000380701 Q6ZR54 194 aa4.37□□□□□ -1.71
CCDC171-201ENST00000380701 FLNAP21333 2647 aaKnown RBP4.36□□□□□ -1.71
CCDC171-201ENST00000380701 A0A0D9SG42 100 aa4.36□□□□□ -1.71
CCDC171-201ENST00000380701 LINC00472Q9H8W2 130 aa4.35□□□□□ -1.71
CCDC171-201ENST00000380701 ATRQ13535 2644 aa4.35□□□□□ -1.71
CCDC171-201ENST00000380701 KTN1-AS1Q86SY8 53 aa4.35□□□□□ -1.71
CCDC171-201ENST00000380701 WDR87Q6ZQQ6 2873 aa4.35□□□□□ -1.71
CCDC171-201ENST00000380701 SPINK7P58062 85 aa4.35□□□□□ -1.71
CCDC171-201ENST00000380701 STAB1Q9NY15 2570 aa4.35□□□□□ -1.71
CCDC171-201ENST00000380701 R4GN34 69 aa4.33□□□□□ -1.72
CCDC171-201ENST00000380701 KRTAP10-1P60331 282 aa4.33□□□□□ -1.72
CCDC171-201ENST00000380701 KRTAP26-1Q6PEX3 210 aa4.33□□□□□ -1.72
CCDC171-201ENST00000380701 LINC01558Q9Y6Z2 57 aa4.33□□□□□ -1.72
CCDC171-201ENST00000380701 ITPR3Q14573 2671 aa4.32□□□□□ -1.72
CCDC171-201ENST00000380701 Q5W150 140 aa4.32□□□□□ -1.72
CCDC171-201ENST00000380701 Q75L30 129 aa4.32□□□□□ -1.72
CCDC171-201ENST00000380701 ASB16-AS1Q495Z4 193 aa4.31□□□□□ -1.72
CCDC171-201ENST00000380701 KRTAP1-5Q9BYS1 174 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms