RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 LINC00208Q96KT6 92 aa4.96□□□□□ -1.62
CDKL5-201ENST00000379989 LRRK2Q5S007 2527 aa4.96□□□□□ -1.62
CDKL5-201ENST00000379989 LINC00313P59037 77 aa4.95□□□□□ -1.62
CDKL5-201ENST00000379989 LINC01554Q52M75 96 aa4.95□□□□□ -1.62
CDKL5-201ENST00000379989 Q8IZM0 81 aa4.95□□□□□ -1.62
CDKL5-201ENST00000379989 SPG11Q96JI7 2443 aa4.95□□□□□ -1.62
CDKL5-201ENST00000379989 IGHV4-30-4P0DP06 118 aa4.95□□□□□ -1.62
CDKL5-201ENST00000379989 ELOF1P60002 83 aaKnown RBP4.95□□□□□ -1.62
CDKL5-201ENST00000379989 C9orf116Q5BN46 136 aaPredicted RBP4.95□□□□□ -1.62
CDKL5-201ENST00000379989 NDUFB1O75438 58 aa4.95□□□□□ -1.62
CDKL5-201ENST00000379989 PTPN13Q12923 2485 aa4.94□□□□□ -1.62
CDKL5-201ENST00000379989 TRGV4A0A0C4DH28 118 aa4.94□□□□□ -1.62
CDKL5-201ENST00000379989 A0A1B0GUV1 79 aa4.94□□□□□ -1.62
CDKL5-201ENST00000379989 H3BNG1 76 aa4.93□□□□□ -1.62
CDKL5-201ENST00000379989 IGLV6-57P01721 117 aa4.93□□□□□ -1.62
CDKL5-201ENST00000379989 HIGD2BQ4VC39 106 aa4.93□□□□□ -1.62
CDKL5-201ENST00000379989 Q9BRP9 147 aa4.93□□□□□ -1.62
CDKL5-201ENST00000379989 LINC00959A0A1B0GUT2 108 aa4.93□□□□□ -1.62
CDKL5-201ENST00000379989 PRO0255Q9UI72 69 aa4.93□□□□□ -1.62
CDKL5-201ENST00000379989 COX17Q14061 63 aa4.93□□□□□ -1.62
CDKL5-201ENST00000379989 NOP10Q9NPE3 64 aaKnown RBP4.92□□□□□ -1.62
CDKL5-201ENST00000379989 LOC100131303A0A0U1RQF7 123 aa4.92□□□□□ -1.62
CDKL5-201ENST00000379989 INAFM1C9JVW0 142 aa4.92□□□□□ -1.62
CDKL5-201ENST00000379989 KRTAP10-3P60369 221 aa4.91□□□□□ -1.62
CDKL5-201ENST00000379989 KIAA0087Q14695 138 aa4.91□□□□□ -1.62
CDKL5-201ENST00000379989 ADM2Q7Z4H4 148 aa4.91□□□□□ -1.62
CDKL5-201ENST00000379989 ITPR3Q14573 2671 aa4.91□□□□□ -1.62
CDKL5-201ENST00000379989 VPREB1P12018 145 aa4.9□□□□□ -1.62
CDKL5-201ENST00000379989 X6R8D5 127 aa4.9□□□□□ -1.62
CDKL5-201ENST00000379989 CENPEQ02224 2701 aa4.9□□□□□ -1.63
CDKL5-201ENST00000379989 SPANXA2-OT1Q8N9U9 137 aa4.9□□□□□ -1.63
CDKL5-201ENST00000379989 UNC79Q9P2D8 2635 aa4.9□□□□□ -1.63
CDKL5-201ENST00000379989 EGFEM1PQ0D2K5 195 aa4.89□□□□□ -1.63
CDKL5-201ENST00000379989 ITPR2Q14571 2701 aa4.89□□□□□ -1.63
CDKL5-201ENST00000379989 SPART-AS1P0CW21 52 aa4.89□□□□□ -1.63
CDKL5-201ENST00000379989 SERTAD4-AS1Q5TG53 156 aa4.89□□□□□ -1.63
CDKL5-201ENST00000379989 KCNQ1DNQ9H478 68 aa4.89□□□□□ -1.63
CDKL5-201ENST00000379989 IGHV4-28A0A0C4DH34 117 aa4.89□□□□□ -1.63
CDKL5-201ENST00000379989 NOTCH3Q9UM47 2321 aa4.89□□□□□ -1.63
CDKL5-201ENST00000379989 MAP1AP78559 2803 aaPredicted RBP4.89□□□□□ -1.63
CDKL5-201ENST00000379989 SPINK7P58062 85 aa4.88□□□□□ -1.63
CDKL5-201ENST00000379989 DSCR10P59022 87 aa4.88□□□□□ -1.63
CDKL5-201ENST00000379989 BAHCC1Q9P281 2608 aa4.88□□□□□ -1.63
CDKL5-201ENST00000379989 DNAH3Q8TD57 4116 aa4.88□□□□□ -1.63
CDKL5-201ENST00000379989 K7EQZ3 153 aa4.88□□□□□ -1.63
CDKL5-201ENST00000379989 WFDC10AQ9H1F0 79 aa4.88□□□□□ -1.63
CDKL5-201ENST00000379989 CLPSL2Q6UWE3 100 aa4.87□□□□□ -1.63
CDKL5-201ENST00000379989 PLAC8Q9NZF1 115 aa4.87□□□□□ -1.63
CDKL5-201ENST00000379989 COA5Q86WW8 74 aa4.87□□□□□ -1.63
CDKL5-201ENST00000379989 MP68P56378 58 aa4.86□□□□□ -1.63
CDKL5-201ENST00000379989 SMR3AQ99954 134 aa4.86□□□□□ -1.63
CDKL5-201ENST00000379989 HIVEP2P31629 2446 aa4.86□□□□□ -1.63
CDKL5-201ENST00000379989 Q8NAQ8 132 aa4.85□□□□□ -1.63
CDKL5-201ENST00000379989 LINC01558Q9Y6Z2 57 aa4.85□□□□□ -1.63
CDKL5-201ENST00000379989 SETXQ7Z333 2677 aaKnown RBP4.85□□□□□ -1.63
CDKL5-201ENST00000379989 LELP1Q5T871 98 aa4.85□□□□□ -1.63
CDKL5-201ENST00000379989 CASC2Q6XLA1 102 aa4.85□□□□□ -1.63
CDKL5-201ENST00000379989 TEX15Q9BXT5 2789 aa4.85□□□□□ -1.63
CDKL5-201ENST00000379989 PLA2G1BP04054 148 aaKnown RBP4.85□□□□□ -1.63
CDKL5-201ENST00000379989 GYPEP15421 78 aa4.84□□□□□ -1.63
CDKL5-201ENST00000379989 DEFB116Q30KQ4 102 aa4.84□□□□□ -1.63
CDKL5-201ENST00000379989 FLNAP21333 2647 aaKnown RBP4.84□□□□□ -1.63
CDKL5-201ENST00000379989 A0A1W2PNM2 257 aa4.84□□□□□ -1.64
CDKL5-201ENST00000379989 SPAG11BQ08648 103 aa4.84□□□□□ -1.64
CDKL5-201ENST00000379989 KPRPQ5T749 579 aaPredicted RBP4.84□□□□□ -1.64
CDKL5-201ENST00000379989 LINC00528Q8N1L1 170 aa4.84□□□□□ -1.64
CDKL5-201ENST00000379989 ABCA12Q86UK0 2595 aa4.83□□□□□ -1.64
CDKL5-201ENST00000379989 SPAG11AQ6PDA7 123 aa4.83□□□□□ -1.64
CDKL5-201ENST00000379989 UNQ6190/PRO20217Q6UXQ8 127 aa4.83□□□□□ -1.64
CDKL5-201ENST00000379989 IGLV5-48A0A075B6I7 105 aa4.82□□□□□ -1.64
CDKL5-201ENST00000379989 J3QL48 77 aa4.82□□□□□ -1.64
CDKL5-201ENST00000379989 C9orf163Q8N9P6 203 aa4.82□□□□□ -1.64
CDKL5-201ENST00000379989 MXRA5Q9NR99 2828 aa4.82□□□□□ -1.64
CDKL5-201ENST00000379989 POLQO75417 2590 aa4.82□□□□□ -1.64
CDKL5-201ENST00000379989 LCE2BO14633 110 aa4.81□□□□□ -1.64
CDKL5-201ENST00000379989 DEFB130BP0DP73 79 aa4.81□□□□□ -1.64
CDKL5-201ENST00000379989 DEFB130AP0DP74 79 aa4.81□□□□□ -1.64
CDKL5-201ENST00000379989 A0A1B0GW54 56 aa4.81□□□□□ -1.64
CDKL5-201ENST00000379989 CNBPP62633 177 aaKnown RBP4.81□□□□□ -1.64
CDKL5-201ENST00000379989 WFDC13Q8IUB5 93 aa4.81□□□□□ -1.64
CDKL5-201ENST00000379989 H0Y9P7 68 aa4.8□□□□□ -1.64
CDKL5-201ENST00000379989 LINC00476Q8WZB0 136 aa4.8□□□□□ -1.64
CDKL5-201ENST00000379989 XAGE1AQ9HD64 81 aa4.8□□□□□ -1.64
CDKL5-201ENST00000379989 IGLV10-54A0A075B6I4 117 aa4.8□□□□□ -1.64
CDKL5-201ENST00000379989 IGKV2D-24A0A075B6R9 120 aa4.8□□□□□ -1.64
CDKL5-201ENST00000379989 DEFB135Q30KP9 77 aa4.8□□□□□ -1.64
CDKL5-201ENST00000379989 Q8N377 158 aa4.8□□□□□ -1.64
CDKL5-201ENST00000379989 PRR34Q9NV39 138 aa4.8□□□□□ -1.64
CDKL5-201ENST00000379989 MYO9AB2RTY4 2548 aa4.8□□□□□ -1.64
CDKL5-201ENST00000379989 ZANQ9Y493 2812 aa4.8□□□□□ -1.64
CDKL5-201ENST00000379989 GVQW2A0A096LPI5 108 aaPredicted RBP4.8□□□□□ -1.64
CDKL5-201ENST00000379989 CHCHD10Q8WYQ3 142 aaPredicted RBP4.8□□□□□ -1.64
CDKL5-201ENST00000379989 A0A0J9YWU9 116 aa4.79□□□□□ -1.64
CDKL5-201ENST00000379989 DEFB105AQ8NG35 78 aa4.79□□□□□ -1.64
CDKL5-201ENST00000379989 H3BPC8 53 aa4.78□□□□□ -1.64
CDKL5-201ENST00000379989 Q8NBF4 154 aa4.78□□□□□ -1.64
CDKL5-201ENST00000379989 IGLV7-46A0A075B6I9 117 aa4.78□□□□□ -1.64
CDKL5-201ENST00000379989 KRTAP24-1Q3LI83 254 aa4.78□□□□□ -1.64
CDKL5-201ENST00000379989 RETNLBQ9BQ08 111 aa4.78□□□□□ -1.64
CDKL5-201ENST00000379989 WFDC10BQ8IUB3 73 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms