RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 LINC00167Q96N53 147 aa9.73□□□□□ -0.85
TCOF1-202ENST00000377797 NBDYA0A0U1RRE5 68 aa9.73□□□□□ -0.85
TCOF1-202ENST00000377797 WIPF1O43516 503 aa9.73□□□□□ -0.85
TCOF1-202ENST00000377797 IGLV9-49A0A0B4J1Y8 123 aa9.73□□□□□ -0.85
TCOF1-202ENST00000377797 ZNF706Q9Y5V0 76 aaPredicted RBP9.73□□□□□ -0.85
TCOF1-202ENST00000377797 PRLHP81277 87 aa9.72□□□□□ -0.85
TCOF1-202ENST00000377797 RELNP78509 3460 aa9.72□□□□□ -0.85
TCOF1-202ENST00000377797 NSD1Q96L73 2696 aaPredicted RBP9.71□□□□□ -0.85
TCOF1-202ENST00000377797 CELSR2Q9HCU4 2923 aa9.71□□□□□ -0.85
TCOF1-202ENST00000377797 LAMA5O15230 3695 aa9.71□□□□□ -0.85
TCOF1-202ENST00000377797 A0A087WVE0 104 aa9.71□□□□□ -0.86
TCOF1-202ENST00000377797 Q6ZRP5 223 aa9.7□□□□□ -0.86
TCOF1-202ENST00000377797 DCHS1Q96JQ0 3298 aa9.69□□□□□ -0.86
TCOF1-202ENST00000377797 DCHS2Q6V1P9 2916 aa9.68□□□□□ -0.86
TCOF1-202ENST00000377797 PRR4Q16378 134 aa9.67□□□□□ -0.86
TCOF1-202ENST00000377797 LINC00846Q9NV44 126 aa9.67□□□□□ -0.86
TCOF1-202ENST00000377797 FAM104AQ969W3 186 aa9.67□□□□□ -0.86
TCOF1-202ENST00000377797 NF1P21359 2839 aa9.66□□□□□ -0.86
TCOF1-202ENST00000377797 ASPMQ8IZT6 3477 aa9.66□□□□□ -0.86
TCOF1-202ENST00000377797 SMIM26A0A096LP01 95 aa9.66□□□□□ -0.86
TCOF1-202ENST00000377797 VPREB1P12018 145 aa9.66□□□□□ -0.86
TCOF1-202ENST00000377797 C15orf56Q8N910 161 aa9.65□□□□□ -0.86
TCOF1-202ENST00000377797 SPINK6Q6UWN8 80 aa9.65□□□□□ -0.86
TCOF1-202ENST00000377797 TRAV7A0A075B6U4 112 aa9.65□□□□□ -0.87
TCOF1-202ENST00000377797 WFDC13Q8IUB5 93 aa9.65□□□□□ -0.87
TCOF1-202ENST00000377797 SMCR5Q8TEV8 140 aa9.64□□□□□ -0.87
TCOF1-202ENST00000377797 Q9BRP9 147 aa9.64□□□□□ -0.87
TCOF1-202ENST00000377797 ELOF1P60002 83 aaKnown RBP9.64□□□□□ -0.87
TCOF1-202ENST00000377797 SEC61GP60059 68 aa9.62□□□□□ -0.87
TCOF1-202ENST00000377797 CHTF8P0CG12 524 aa9.62□□□□□ -0.87
TCOF1-202ENST00000377797 C16orf90A8MZG2 172 aa9.62□□□□□ -0.87
TCOF1-202ENST00000377797 TRBV7-6A0A0J9YX20 115 aa9.61□□□□□ -0.87
TCOF1-202ENST00000377797 IGLV6-57P01721 117 aa9.61□□□□□ -0.87
TCOF1-202ENST00000377797 SERP1Q9Y6X1 66 aa9.61□□□□□ -0.87
TCOF1-202ENST00000377797 ASH1LQ9NR48 2969 aaKnown RBP9.6□□□□□ -0.87
TCOF1-202ENST00000377797 PHF5AQ7RTV0 110 aaKnown RBP9.6□□□□□ -0.87
TCOF1-202ENST00000377797 FAM30AQ9NZY2 134 aa9.6□□□□□ -0.87
TCOF1-202ENST00000377797 FAM168BA1KXE4 195 aa9.59□□□□□ -0.87
TCOF1-202ENST00000377797 A0A087WSZ3 146 aa9.59□□□□□ -0.87
TCOF1-202ENST00000377797 Q6ZVQ6 151 aa9.59□□□□□ -0.87
TCOF1-202ENST00000377797 WWC2-AS2Q96NR7 200 aa9.59□□□□□ -0.87
TCOF1-202ENST00000377797 SERTAD4-AS1Q5TG53 156 aa9.59□□□□□ -0.87
TCOF1-202ENST00000377797 Q6ZRX8 168 aa9.59□□□□□ -0.87
TCOF1-202ENST00000377797 A6NED7 52 aa9.58□□□□□ -0.88
TCOF1-202ENST00000377797 FBN2P35556 2912 aa9.57□□□□□ -0.88
TCOF1-202ENST00000377797 C4orf26Q17RF5 130 aa9.57□□□□□ -0.88
TCOF1-202ENST00000377797 PRO0628Q9UI54 55 aa9.57□□□□□ -0.88
TCOF1-202ENST00000377797 RTL8CO15255 209 aa9.56□□□□□ -0.88
TCOF1-202ENST00000377797 TRBV7-7A0A0K0K1E9 115 aa9.56□□□□□ -0.88
TCOF1-202ENST00000377797 CASC10Q5T4H9 136 aa9.56□□□□□ -0.88
TCOF1-202ENST00000377797 CASC2Q6XLA1 102 aa9.56□□□□□ -0.88
TCOF1-202ENST00000377797 NIPBLQ6KC79 2804 aaeCLIP9.55□□□□□ -0.883e-7■■■■■ 27.8
TCOF1-202ENST00000377797 CIRBP-AS1Q8TBR5 109 aa9.55□□□□□ -0.88
TCOF1-202ENST00000377797 APLNQ9ULZ1 77 aa9.54□□□□□ -0.88
TCOF1-202ENST00000377797 ST20-AS1Q8NBB2 130 aa9.53□□□□□ -0.88
TCOF1-202ENST00000377797 LINC01547P58512 204 aaPredicted RBP9.52□□□□□ -0.89
TCOF1-202ENST00000377797 C9orf129Q5T035 196 aaKnown RBP9.52□□□□□ -0.89
TCOF1-202ENST00000377797 DEFB116Q30KQ4 102 aa9.52□□□□□ -0.89
TCOF1-202ENST00000377797 Q8N9L7 120 aa9.51□□□□□ -0.89
TCOF1-202ENST00000377797 KCNQ1DNQ9H478 68 aa9.51□□□□□ -0.89
TCOF1-202ENST00000377797 EPM2AB3EWF7 344 aa9.5□□□□□ -0.89
TCOF1-202ENST00000377797 IGLV1-50A0A075B6I6 118 aa9.49□□□□□ -0.89
TCOF1-202ENST00000377797 MXRA5Q9NR99 2828 aa9.49□□□□□ -0.89
TCOF1-202ENST00000377797 Q6ZQT0 140 aa9.49□□□□□ -0.89
TCOF1-202ENST00000377797 LINC00528Q8N1L1 170 aa9.49□□□□□ -0.89
TCOF1-202ENST00000377797 RPS28P62857 69 aaKnown RBP9.48□□□□□ -0.89
TCOF1-202ENST00000377797 LINC00208Q96KT6 92 aa9.48□□□□□ -0.89
TCOF1-202ENST00000377797 PRR15LQ9BU68 103 aa9.48□□□□□ -0.89
TCOF1-202ENST00000377797 TLX1NBP0CAT3 122 aa9.47□□□□□ -0.89
TCOF1-202ENST00000377797 ZFHX4Q86UP3 3567 aa9.47□□□□□ -0.89
TCOF1-202ENST00000377797 C9orf163Q8N9P6 203 aa9.46□□□□□ -0.89
TCOF1-202ENST00000377797 TMEM254Q8TBM7 123 aa9.46□□□□□ -0.9
TCOF1-202ENST00000377797 LOC110117498A0A087WWA1 95 aa9.45□□□□□ -0.9
TCOF1-202ENST00000377797 PMAIP1Q13794 54 aa9.44□□□□□ -0.9
TCOF1-202ENST00000377797 LINC00476Q8WZB0 136 aa9.44□□□□□ -0.9
TCOF1-202ENST00000377797 A0A087WTM6 91 aa9.44□□□□□ -0.9
TCOF1-202ENST00000377797 Q8NBF4 154 aa9.44□□□□□ -0.9
TCOF1-202ENST00000377797 CRYGAP11844 174 aa9.43□□□□□ -0.9
TCOF1-202ENST00000377797 CXCL6P80162 114 aa9.43□□□□□ -0.9
TCOF1-202ENST00000377797 BCE1O60756 84 aa9.43□□□□□ -0.9
TCOF1-202ENST00000377797 KMT2BQ9UMN6 2715 aaPredicted RBP9.43□□□□□ -0.9
TCOF1-202ENST00000377797 MOBPQ13875 183 aa9.42□□□□□ -0.9
TCOF1-202ENST00000377797 IGHV6-1A0A0B4J1U7 121 aa9.41□□□□□ -0.9
TCOF1-202ENST00000377797 PSPHP1O15172 72 aa9.41□□□□□ -0.9
TCOF1-202ENST00000377797 K7ERS5 55 aa9.4□□□□□ -0.9
TCOF1-202ENST00000377797 PLA2G2DQ9UNK4 145 aa9.4□□□□□ -0.9
TCOF1-202ENST00000377797 CNBPP62633 177 aaKnown RBP9.39□□□□□ -0.91
TCOF1-202ENST00000377797 A0A1W2PNN7 141 aa9.38□□□□□ -0.91
TCOF1-202ENST00000377797 A0A1B0GW54 56 aa9.37□□□□□ -0.91
TCOF1-202ENST00000377797 Q8N377 158 aa9.36□□□□□ -0.91
TCOF1-202ENST00000377797 HCG22E2RYF7 251 aa9.34□□□□□ -0.91
TCOF1-202ENST00000377797 STAB2Q8WWQ8 2551 aa9.33□□□□□ -0.92
TCOF1-202ENST00000377797 PCOTHQ58A44 107 aa9.33□□□□□ -0.92
TCOF1-202ENST00000377797 TENM4Q6N022 2769 aa9.32□□□□□ -0.92
TCOF1-202ENST00000377797 H0Y9P7 68 aa9.32□□□□□ -0.92
TCOF1-202ENST00000377797 TRBV7-4A0A0J9YYF1 115 aa9.3□□□□□ -0.92
TCOF1-202ENST00000377797 ERC2-IT1O76042 136 aa9.3□□□□□ -0.92
TCOF1-202ENST00000377797 Q8NDZ9 215 aa9.3□□□□□ -0.92
TCOF1-202ENST00000377797 SMIM29Q86T20 159 aa9.29□□□□□ -0.92
TCOF1-202ENST00000377797 IGLV5-37A0A075B6J1 123 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms